Tomato leaf curl Palampur virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000875365.1
Isolate India:Himachal Pradesh
Release date 2015/2/13
Submitter Kumar,Y., Hallan,V., Zaidi,A.A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_010839
ACCGAAAGGCCCCGGTTTCCTGGCAATTCATCTTAGCCGTTCTTTTTTGTCTTTCTCATAATCCTAACGGTTGTATTTGTAACACGTGTTTATTTGGCAGGCTTTATTCATTTAAAGCCGTAGCCCGCGTTTTAGTGTTGCGCATTGTGGTCCATTCATTAATGCTTATTTATTGCTTTTATGTGGTCCCGCGCACTACTAAAAAGACGTTCAATAAATCAAAATCATCTGACAACGTTTCTTTTTATTGATCGGCCAAGATCAATAGGTAATTGCTTCGAAATTTCCAACCGTCCGATTATTGATATTTGCTTTAATTCAAACATTATTTGTTTGAATTTTATGTGTTCCTCGACGTGCATAATTTCCCTTTATAAACCCTACCATTCATCAATGTCTGAATAGGTTTTTATACGTCTTTATCTAAATGGCTTTTCCTTCTCCTTATACCACCCCTCGTCGGTTAGGTTCATCCTATCCGAGACGGTACAACGGAACCAGAAGCGTGAGATTCTGGAAATTCCGTAAATCTCAGCCATGGTTACGTCATCGTCCAAGTGCATCGTCTTCCAGATCTGCTACTGAACTGTTTGGAGAGCCCATCTCCAAACAATATACGCGTAAGGAAATATGTGAAACTCAACAGGGGTCGGAATATGTTTTGCAGAACAATCGATATATGACCTCTTACGTTACATATCCATCTAAAACTAGAACGGGAACGAACAACCGAGTTCGTTCGTACATCAAGTTAAAAAGTCTGAACTTATCTGGAACTTTTGCCATTCGCAGTACTGAAATGATGCAGGACGTCGACCAGAGTGGTGGTTTATATGGTGTGATGTCAGTAGTTGTCGTCAGGGATAAATCGCCTAAGATTTATTCTACTGCCCAACCATTAATCCCGTTTCTAGATATATTCGGATCGGTAAACGCTTGCAGGGGAACATTGAAGGTGGCGGAACGCCACCGCGATAGATTTGTAGTTTTGAATCAGTCTTCAATAATTGTTAATACTCCACATACTAACACTATGAAAAAATTCTGCATTCGCAATTGCATCCCAAAAACCTATACTACTTGGGTCACGTTCCGCGACGAAGAAGAGGACAATTGCACTGGACTGTACTCTAACACACTGCGAAATGCTATACTTATTTATTATGTATGGTTAAGCGATGTACCCTCTCAAGTCGATTTGTATAGTAATGTAATTCTTAATTATATTGGCTGATTAAATGTATCAATTCTTAAAAAATGCACCCGTAATGCAAAAGAAATAAATTTGACATAAAATTTATTAGACGCCCTTTGAAAGTGGAGCATTTACATTGGATTTTATACATTGTTCTACTGTTTTTGAAATTATATCTGCAATTTCTTCTCTCGTAATACTTCCTGCTTGTGACGCCGAAGGACCAGGATCGATTGCGGAATCGTCCAGTCCGCTTAAGTTCTTGTAAGGTCTGCTGGTGACGGACGAATGTCCGATCTCTGATCTGCTAGCCCATGACTCGTTCGGACCTATCGTCAGATATGGTACCCTTAACGATCTAGAACTGTGTCCGATTAATCGTGAACCATCCACCAAACGTCTTGTCTGTGGTTTCGAACCCACAGACCAGAAATCAATGTCGTTTAATGTGAATTCCTTGCTATGTATTTCAATTTTCGGTGGTCGGAATTCGACGTCAGTCGAATGTTTTGCCGACGATAGCTTCAATTTACCCAAAATCCTGCAGAAGTGAACTCCATCTACGACGTTTGTGTTCTCCACCCTATATTCAACTCGCCAAGGATTTAAATCCTTGAGAGAGAAGAACGAAGAAGAGTAGTAGTGCAGGTTACAATTGCATTTGATGGGAATATTAAACTCAGCCTGTTTCGTGTCCCCTTCCGTTAACCTCATGTCGTGTATTTCAATCACGACATGTCCAACTGCATTAATGGGTACCTGACTGCGGTATTCTAGTACGATGTGATCAATTTTCATGCATCTGTTTCGTAATTGGCTTATTTTCTGCTCGAACATCGACGGAAACGTTAATTTAACCTCTGCAGCATCGTTTGTGAGCGCGTACTCAACGCGTTCAGACTGAACGTATCCTCCCACGGACAAACCCTCCCTATCATTTCTTATTGACATATTGGAAGCGCAGCGAAAAAGGGAGCGCAGCGGATATGCAGTAAAACCTGCGAACACAAAGAACTACAGAGCTTGAGGGAGGAAATGAAATGCTAAAATCAACGAAGTTGTATTTTGTTAGCAACGACGAACATTGTTTTATAATGTCTCTAGAGTCATGTCGTAATCAAATCAAACAAACTCAAACGGACGGCACAGATTTTATGGAGTAAAAGCTATTGTGCCTATGCAACTTTAATGAATTAGGGTTTTGCTATATCTTCTTCATTTTGTGATACCATAAATTGGTAACAATTTATGAGTTGTTTGCAATATATGTATGTTCCTGAAAAAATGGAAGCCCATATATTACAGGCCCAATCCAAAAGCTTCAGGTCATATTTTAAAACGACCTCGTTTTAAAGGAGAAAAGTTAATGCGTCTAGAGAGAAGTCACATTTTCTCTCTCTAAAATCCATCCGGTGTCTCTCAACTTCTTGTATTATATTGGTGTCTGGGGTCCTATATATACTTAAAACCCTAAATGGCATAAATGTAAATTTAGAGAAAACTACTAAGGGGCCTTTCGTATATAATATT
NC_010840
ACCGAATGGCCGCGGTGCCTTTTGTGTGGGTCCAGAACCAATGAAATTCGAGATACATGGCTTATTTAATGCGTGGGGACCAATAAATAGACTTGCTCACCAAGCTTGGATCCACAAACATGTGGGATCCATTATTGCACGAATTTCCTGAAAGCGTTCATGGTCTTAGGTGCATGCTAGCTGTAAAATATCTCAAAGAGATAGAAAAGACCTACTCTCCGGACACAATCGGATACGATCTTGTTCGTGACCTAATCTCTGTCGTCCGTGCCAGAAACTATGGTGAAGCGTCCAGCAGATATCTACATTTCAACGCCCGCATCGAAAGCACGCCGTCGTCTGAACTTCGACAGCCCGTATGCTGTCCGTGCAGCTGTCCCTATTGTCCGCGCCACAAAGGCAAGGGAATGGGTGAACAGACCCATGAACCGGAAACCAAGATTTTACCGGATGTATCGAAGCTCGGACGTGCCCAGGGGCTGTGAAGGCCCATGTAAGGTGCAATCTTTTGAATCCAGGCACGATGTCTCCCATATTGGTAAGGTGATGTGTATTAGCGACGTTACCCGTGGAACCGGTCTCACACATCGCGTCGGAAAGCGATTCTGTGTGAAGTCCGTCTACGTGCTTGGCAAGATCTGGATGGACGAGAATATCAAGACCAAGAACCACACGAATAGTGTGATGTTTTTCTTGGTGCGTGATCGTCGACCTACGGGTGCGCCACAAGATTTCGGCGAAGTTTTTAATATGTTCGACAACGAACCTAGCACTGCCACTGTTAAGAATATGCATCGTGATCGATATCAAGTGCTCAAAAAATGGCATTCGACTGTGACGGGAGGAACATACGCGTCGAAGGAACAAGCATTAGTTAAACGTTTTATTAGAGTTAATAATTACGTTGTATATAATCAACAAGAGGCCGGCAAGTATGAGAATCATACTGAAAATGCATTAATGTTGTATATGGCCTGTACTCATCCATCAAATCCTGTATATGCGACTTTAAAAATCCGGATCTATTTTTATGATTCGGTAACAAATTAATATGTATTAAGTTTTACATCATATGTTGCCCATACATCAACTGTTCTTTGCAATACATTGTCTAATACATGATAAGCTGCTCTTATTACATTATTAATTCCAACAACACCTAACATATCGAGGTACTTAAGGACCTGGGTTTTGAAAACTCTCAAGAAACGCCCAGTCTGAGGGCGTAAGCCCGTCCAGATCTGGAATGTTAGAAAACACTTGTGAAGCCCCAGTGCTTTCCTCAGGTTGTGGTTGAACTGTATTTGGACTGTTATAATGTCGTGGTTCGTGAGGCAAGGTCTCTCGTCGTGTTTCAAAATTTTGAAATACAGGGGATTTGGAACGTCCCAGATATACACGCCACTCTCTGCTCGATCCGCAGTGATGTATTCCCCTGTGCGTGAATCCGTGATCATGGCAGTTGATCGATATGTAATACGAACAACCACACTGCAAATCAACTCGTCTCCTGCGGATGTTCTTCTTCTTCTTCTTGGGGAGCGACGTTTTCGCGACCGGAATAGAGTGGTCCCTCGAGTGTAATGAAGACTGCATTCTTCAATGCCCACTGTTTCAGTGCTGCATTCTTTTCTTCGTCCAAGAATTCTTTATAGCTGCTTTGTGGTCCTTTATTGCACAAGAAGATAGTGGGAATGCCGCCTTTAATCATCATCGGCTTTCCGTATTTTGTGTTGCTTTGCCAGTCACGCTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGATCAACGTCATCAATGACGTTGTACCAAGCATCGTTACTGTAAACCCTAGGGTTTAGATCCAAGTGACCGCACAAGTAATTGTGGGGTCCCAAACTACGCGCCCACATTGTTTTGCCCGTACGACTATCGCCCTCCAATACTAACCCTATGGGTCTAATCGGGAGCGCAGCGGAAAAAGGCCGCGCAGCGGAACACCTCAAATTTGACGACACCCAATCGACGAGTTCTGGCGGAACTCTGTCGAAGGACGAAACAGTAAATGGCGAACGATAAACTTCGATTCGAGAAGGAAAAATCCGATCTAAATTTGTCATTAAATTGTGAAACTGCAACACATAATCTTTTGGTGCTAATTCTTTTAGCACCTTCAATGCGTCTTCTTTATTTCCAGTATTAATTGCTTGTGCGTATGCATCGTTAGCTGTTTGTTGACCACCACGAGCAGATCGTCCATCGATCTGGAAAACACCCCACTCTAAAACGTCTCCGTCTTTGTCGATGTATGTCTTGACATCTGACGCTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCGACTTGGGGCAACCAAGTCGAAGAATCTGTTATTTTTGCACTGGAATTTTCCTTCAAATTGGATGAGAACATGGATATGCGGAGACCCATCTTCGTGAAGCTCTCTGCAGATTTTTATGAATTTCTTTGATGTAGGGGTTTCTAGGTTTTGTAATTGGGAAAGTGCCTCTTCTTTAGTTAGAGAGCACTTTGGATATGTAAGGAAATAGTTTTTTGCATTTATTCTGAAACGAGTTGGCGGAGCCATAAACCTCGTATTTCCAACCGGTGTCTCTCAACTTCTTGTATTATATTGGTGTCTGGGGTCCTATATATACATAAGACCCTAAATGGCATAATTGTAATTTTAGAGATAAAATTACTTTAATTCAAACTCCTATAGCGGCCATTCGTATAATATT

Gene Information

NCBI Accession YP_001960966.1
Location 428-1234
Gene Name BV1
Protein Name nuclear shuttle protein
Coding Region ATGGCTTTTCCTTCTCCTTATACCACCCCTCGTCGGTTAGGTTCATCCTATCCGAGACGGTACAACGGAACCAGAAGCGTGAGATTCTGGAAATTCCGTAAATCTCAGCCATGGTTACGTCATCGTCCAAGTGCATCGTCTTCCAGATCTGCTACTGAACTGTTTGGAGAGCCCATCTCCAAACAATATACGCGTAAGGAAATATGTGAAACTCAACAGGGGTCGGAATATGTTTTGCAGAACAATCGATATATGACCTCTTACGTTACATATCCATCTAAAACTAGAACGGGAACGAACAACCGAGTTCGTTCGTACATCAAGTTAAAAAGTCTGAACTTATCTGGAACTTTTGCCATTCGCAGTACTGAAATGATGCAGGACGTCGACCAGAGTGGTGGTTTATATGGTGTGATGTCAGTAGTTGTCGTCAGGGATAAATCGCCTAAGATTTATTCTACTGCCCAACCATTAATCCCGTTTCTAGATATATTCGGATCGGTAAACGCTTGCAGGGGAACATTGAAGGTGGCGGAACGCCACCGCGATAGATTTGTAGTTTTGAATCAGTCTTCAATAATTGTTAATACTCCACATACTAACACTATGAAAAAATTCTGCATTCGCAATTGCATCCCAAAAACCTATACTACTTGGGTCACGTTCCGCGACGAAGAAGAGGACAATTGCACTGGACTGTACTCTAACACACTGCGAAATGCTATACTTATTTATTATGTATGGTTAAGCGATGTACCCTCTCAAGTCGATTTGTATAGTAATGTAATTCTTAATTATATTGGCTGA
Protein Sequence MAFPSPYTTPRRLGSSYPRRYNGTRSVRFWKFRKSQPWLRHRPSASSSRSATELFGEPISKQYTRKEICETQQGSEYVLQNNRYMTSYVTYPSKTRTGTNNRVRSYIKLKSLNLSGTFAIRSTEMMQDVDQSGGLYGVMSVVVVRDKSPKIYSTAQPLIPFLDIFGSVNACRGTLKVAERHRDRFVVLNQSSIIVNTPHTNTMKKFCIRNCIPKTYTTWVTFRDEEEDNCTGLYSNTLRNAILIYYVWLSDVPSQVDLYSNVILNYIG

NCBI Accession YP_001960967.1
Location 1301-2146
Gene Name BC1
Protein Name movement protein
Coding Region ATGTCAATAAGAAATGATAGGGAGGGTTTGTCCGTGGGAGGATACGTTCAGTCTGAACGCGTTGAGTACGCGCTCACAAACGATGCTGCAGAGGTTAAATTAACGTTTCCGTCGATGTTCGAGCAGAAAATAAGCCAATTACGAAACAGATGCATGAAAATTGATCACATCGTACTAGAATACCGCAGTCAGGTACCCATTAATGCAGTTGGACATGTCGTGATTGAAATACACGACATGAGGTTAACGGAAGGGGACACGAAACAGGCTGAGTTTAATATTCCCATCAAATGCAATTGTAACCTGCACTACTACTCTTCTTCGTTCTTCTCTCTCAAGGATTTAAATCCTTGGCGAGTTGAATATAGGGTGGAGAACACAAACGTCGTAGATGGAGTTCACTTCTGCAGGATTTTGGGTAAATTGAAGCTATCGTCGGCAAAACATTCGACTGACGTCGAATTCCGACCACCGAAAATTGAAATACATAGCAAGGAATTCACATTAAACGACATTGATTTCTGGTCTGTGGGTTCGAAACCACAGACAAGACGTTTGGTGGATGGTTCACGATTAATCGGACACAGTTCTAGATCGTTAAGGGTACCATATCTGACGATAGGTCCGAACGAGTCATGGGCTAGCAGATCAGAGATCGGACATTCGTCCGTCACCAGCAGACCTTACAAGAACTTAAGCGGACTGGACGATTCCGCAATCGATCCTGGTCCTTCGGCGTCACAAGCAGGAAGTATTACGAGAGAAGAAATTGCAGATATAATTTCAAAAACAGTAGAACAATGTATAAAATCCAATGTAAATGCTCCACTTTCAAAGGGCGTCTAA
Protein Sequence MSIRNDREGLSVGGYVQSERVEYALTNDAAEVKLTFPSMFEQKISQLRNRCMKIDHIVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFNIPIKCNCNLHYYSSSFFSLKDLNPWRVEYRVENTNVVDGVHFCRILGKLKLSSAKHSTDVEFRPPKIEIHSKEFTLNDIDFWSVGSKPQTRRLVDGSRLIGHSSRSLRVPYLTIGPNESWASRSEIGHSSVTSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIISKTVEQCIKSNVNAPLSKGV

NCBI Accession YP_001960968.1
Location 120-485
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCATTATTGCACGAATTTCCTGAAAGCGTTCATGGTCTTAGGTGCATGCTAGCTGTAAAATATCTCAAAGAGATAGAAAAGACCTACTCTCCGGACACAATCGGATACGATCTTGTTCGTGACCTAATCTCTGTCGTCCGTGCCAGAAACTATGGTGAAGCGTCCAGCAGATATCTACATTTCAACGCCCGCATCGAAAGCACGCCGTCGTCTGAACTTCGACAGCCCGTATGCTGTCCGTGCAGCTGTCCCTATTGTCCGCGCCACAAAGGCAAGGGAATGGGTGAACAGACCCATGAACCGGAAACCAAGATTTTACCGGATGTATCGAAGCTCGGACGTGCCCAGGGGCTGTGA
Protein Sequence MWDPLLHEFPESVHGLRCMLAVKYLKEIEKTYSPDTIGYDLVRDLISVVRARNYGEASSRYLHFNARIESTPSSELRQPVCCPCSCPYCPRHKGKGMGEQTHEPETKILPDVSKLGRAQGL

NCBI Accession YP_001960969.1
Location 280-1050
Gene Name AV1
Protein Name coat protein
Coding Region ATGGTGAAGCGTCCAGCAGATATCTACATTTCAACGCCCGCATCGAAAGCACGCCGTCGTCTGAACTTCGACAGCCCGTATGCTGTCCGTGCAGCTGTCCCTATTGTCCGCGCCACAAAGGCAAGGGAATGGGTGAACAGACCCATGAACCGGAAACCAAGATTTTACCGGATGTATCGAAGCTCGGACGTGCCCAGGGGCTGTGAAGGCCCATGTAAGGTGCAATCTTTTGAATCCAGGCACGATGTCTCCCATATTGGTAAGGTGATGTGTATTAGCGACGTTACCCGTGGAACCGGTCTCACACATCGCGTCGGAAAGCGATTCTGTGTGAAGTCCGTCTACGTGCTTGGCAAGATCTGGATGGACGAGAATATCAAGACCAAGAACCACACGAATAGTGTGATGTTTTTCTTGGTGCGTGATCGTCGACCTACGGGTGCGCCACAAGATTTCGGCGAAGTTTTTAATATGTTCGACAACGAACCTAGCACTGCCACTGTTAAGAATATGCATCGTGATCGATATCAAGTGCTCAAAAAATGGCATTCGACTGTGACGGGAGGAACATACGCGTCGAAGGAACAAGCATTAGTTAAACGTTTTATTAGAGTTAATAATTACGTTGTATATAATCAACAAGAGGCCGGCAAGTATGAGAATCATACTGAAAATGCATTAATGTTGTATATGGCCTGTACTCATCCATCAAATCCTGTATATGCGACTTTAAAAATCCGGATCTATTTTTATGATTCGGTAACAAATTAA
Protein Sequence MVKRPADIYISTPASKARRRLNFDSPYAVRAAVPIVRATKAREWVNRPMNRKPRFYRMYRSSDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGAPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLKKWHSTVTGGTYASKEQALVKRFIRVNNYVVYNQQEAGKYENHTENALMLYMACTHPSNPVYATLKIRIYFYDSVTN

NCBI Accession YP_001960970.1
Location 310-795
Gene Name AC5
Protein Name AC5 protein
Coding Region ATGCATATTCTTAACAGTGGCAGTGCTAGGTTCGTTGTCGAACATATTAAAAACTTCGCCGAAATCTTGTGGCGCACCCGTAGGTCGACGATCACGCACCAAGAAAAACATCACACTATTCGTGTGGTTCTTGGTCTTGATATTCTCGTCCATCCAGATCTTGCCAAGCACGTAGACGGACTTCACACAGAATCGCTTTCCGACGCGATGTGTGAGACCGGTTCCACGGGTAACGTCGCTAATACACATCACCTTACCAATATGGGAGACATCGTGCCTGGATTCAAAAGATTGCACCTTACATGGGCCTTCACAGCCCCTGGGCACGTCCGAGCTTCGATACATCCGGTAAAATCTTGGTTTCCGGTTCATGGGTCTGTTCACCCATTCCCTTGCCTTTGTGGCGCGGACAATAGGGACAGCTGCACGGACAGCATACGGGCTGTCGAAGTTCAGACGACGGCGTGCTTTCGATGCGGGCGTTGA
Protein Sequence MHILNSGSARFVVEHIKNFAEILWRTRRSTITHQEKHHTIRVVLGLDILVHPDLAKHVDGLHTESLSDAMCETGSTGNVANTHHLTNMGDIVPGFKRLHLTWAFTAPGHVRASIHPVKSWFPVHGSVHPFPCLCGADNRDSCTDSIRAVEVQTTACFRCGR

NCBI Accession YP_001960971.1
Location 1047-1457
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGATCACGGATTCACGCACAGGGGAATACATCACTGCGGATCGAGCAGAGAGTGGCGTGTATATCTGGGACGTTCCAAATCCCCTGTATTTCAAAATTTTGAAACACGACGAGAGACCTTGCCTCACGAACCACGACATTATAACAGTCCAAATACAGTTCAACCACAACCTGAGGAAAGCACTGGGGCTTCACAAGTGTTTTCTAACATTCCAGATCTGGACGGGCTTACGCCCTCAGACTGGGCGTTTCTTGAGAGTTTTCAAAACCCAGGTCCTTAAGTACCTCGATATGTTAGGTGTTGTTGGAATTAATAATGTAATAAGAGCAGCTTATCATGTATTAGACAATGTATTGCAAAGAACAGTTGATGTATGGGCAACATATGATGTAAAACTTAATACATATTAA
Protein Sequence MITDSRTGEYITADRAESGVYIWDVPNPLYFKILKHDERPCLTNHDIITVQIQFNHNLRKALGLHKCFLTFQIWTGLRPQTGRFLRVFKTQVLKYLDMLGVVGINNVIRAAYHVLDNVLQRTVDVWATYDVKLNTY

NCBI Accession YP_001960972.1
Location 1177-1596
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCAGTCTTCATTACACTCGAGGGACCACTCTATTCCGGTCGCGAAAACGTCGCTCCCCAAGAAGAAGAAGAAGAACATCCGCAGGAGACGAGTTGATTTGCAGTGTGGTTGTTCGTATTACATATCGATCAACTGCCATGATCACGGATTCACGCACAGGGGAATACATCACTGCGGATCGAGCAGAGAGTGGCGTGTATATCTGGGACGTTCCAAATCCCCTGTATTTCAAAATTTTGAAACACGACGAGAGACCTTGCCTCACGAACCACGACATTATAACAGTCCAAATACAGTTCAACCACAACCTGAGGAAAGCACTGGGGCTTCACAAGTGTTTTCTAACATTCCAGATCTGGACGGGCTTACGCCCTCAGACTGGGCGTTTCTTGAGAGTTTTCAAAACCCAGGTCCTTAA
Protein Sequence MQSSLHSRDHSIPVAKTSLPKKKKKNIRRRRVDLQCGCSYYISINCHDHGFTHRGIHHCGSSREWRVYLGRSKSPVFQNFETRRETLPHEPRHYNSPNTVQPQPEESTGASQVFSNIPDLDGLTPSDWAFLESFQNPGP

NCBI Accession YP_001960973.1
Location 1499-2602
Gene Name AC1
Protein Name replication initiator protein
Coding Region ATGGCTCCGCCAACTCGTTTCAGAATAAATGCAAAAAACTATTTCCTTACATATCCAAAGTGCTCTCTAACTAAAGAAGAGGCACTTTCCCAATTACAAAACCTAGAAACCCCTACATCAAAGAAATTCATAAAAATCTGCAGAGAGCTTCACGAAGATGGGTCTCCGCATATCCATGTTCTCATCCAATTTGAAGGAAAATTCCAGTGCAAAAATAACAGATTCTTCGACTTGGTTGCCCCAAGTCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAGCGTCAGATGTCAAGACATACATCGACAAAGACGGAGACGTTTTAGAGTGGGGTGTTTTCCAGATCGATGGACGATCTGCTCGTGGTGGTCAACAAACAGCTAACGATGCATACGCACAAGCAATTAATACTGGAAATAAAGAAGACGCATTGAAGGTGCTAAAAGAATTAGCACCAAAAGATTATGTGTTGCAGTTTCACAATTTAATGACAAATTTAGATCGGATTTTTCCTTCTCGAATCGAAGTTTATCGTTCGCCATTTACTGTTTCGTCCTTCGACAGAGTTCCGCCAGAACTCGTCGATTGGGTGTCGTCAAATTTGAGGTGTTCCGCTGCGCGGCCTTTTTCCGCTGCGCTCCCGATTAGACCCATAGGGTTAGTATTGGAGGGCGATAGTCGTACGGGCAAAACAATGTGGGCGCGTAGTTTGGGACCCCACAATTACTTGTGCGGTCACTTGGATCTAAACCCTAGGGTTTACAGTAACGATGCTTGGTACAACGTCATTGATGACGTTGATCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAGCGTGACTGGCAAAGCAACACAAAATACGGAAAGCCGATGATGATTAAAGGCGGCATTCCCACTATCTTCTTGTGCAATAAAGGACCACAAAGCAGCTATAAAGAATTCTTGGACGAAGAAAAGAATGCAGCACTGAAACAGTGGGCATTGAAGAATGCAGTCTTCATTACACTCGAGGGACCACTCTATTCCGGTCGCGAAAACGTCGCTCCCCAAGAAGAAGAAGAAGAACATCCGCAGGAGACGAGTTGA
Protein Sequence MAPPTRFRINAKNYFLTYPKCSLTKEEALSQLQNLETPTSKKFIKICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVAPSRSAHFHPNIQGAKSASDVKTYIDKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKEDALKVLKELAPKDYVLQFHNLMTNLDRIFPSRIEVYRSPFTVSSFDRVPPELVDWVSSNLRCSAARPFSAALPIRPIGLVLEGDSRTGKTMWARSLGPHNYLCGHLDLNPRVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPMMIKGGIPTIFLCNKGPQSSYKEFLDEEKNAALKQWALKNAVFITLEGPLYSGRENVAPQEEEEEHPQETS

NCBI Accession YP_001960974.1
Location 2269-2445
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCTCCGCATATCCATGTTCTCATCCAATTTGAAGGAAAATTCCAGTGCAAAAATAACAGATTCTTCGACTTGGTTGCCCCAAGTCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAGCGTCAGATGTCAAGACATACATCGACAAAGACGGAGACGTTTTAG
Protein Sequence MGLRISMFSSNLKENSSAKITDSSTWLPQVGQHISIRTFRELNQRQMSRHTSTKTETF

References More References in PubMed

1

Detecting Tomato Leaf Curl New Delhi Virus Causing Ridge Gourd Yellow Mosaic Disease, and Other Begomoviruses by Antibody-Based Methods.

Naganur P, et al.  Plants (Basel). 2023 Jan 20;12(3):490. doi: 10.3390/plants12030490.

PMID: 36771575
2

Complete sequences of tomato leaf curl Palampur virus isolates infecting cucurbits in Iran.

Heydarnejad J, et al.  Arch Virol. 2009;154(6):1015-8. doi: 10.1007/s00705-009-0389-6. Epub 2009 May 8.

PMID: 19424773
3

First Report of Tomato leaf curl Palampur virus on Bitter Gourd in Pakistan.

Ali I, et al.  Plant Dis. 2010 Feb;94(2):276. doi: 10.1094/PDIS-94-2-0276A.

PMID: 30754274
4

AC4 protein of tomato leaf curl Palampur virus is an RNA silencing suppressor and a pathogenicity determinant.

Kulshreshtha A, et al.  Microb Pathog. 2019 Oct;135:103636. doi: 10.1016/j.micpath.2019.103636. Epub 2019 Aug 2.

PMID: 31377236
5

Analysis of watermelon chlorotic stunt virus and tomato leaf curl Palampur virus mixed and pseudo-recombination infections.

Esmaeili M, et al.  Virus Genes. 2015 Dec;51(3):408-16. doi: 10.1007/s11262-015-1250-5. Epub 2015 Oct 3.

PMID: 26433951
6

Molecular characterization and phylogenetic analysis of tomato leaf curl Palampur virus, a bipartite begomovirus, associated with Cucumis sativus L. in Pakistan.

Shafiq M, et al.  3 Biotech. 2019 Jun;9(6):204. doi: 10.1007/s13205-019-1727-3. Epub 2019 May 7.

PMID: 31139535
7

Molecular Characterization of Tomato leaf curl Palampur virus and Pepper leaf curl betasatellite Naturally Infecting Pumpkin (Cucurbita moschata) in India.

Namrata J, et al.  Indian J Virol. 2010 Oct;21(2):128-32. doi: 10.1007/s13337-011-0022-7. Epub 2011 Mar 16.

PMID: 23637491
8

Infectious clones of Tomato leaf curl Palampur virus with a defective DNA B and their pseudo-recombination with Tomato leaf curl New Delhi virus.

Malik AH, et al.  Virol J. 2011 Apr 15;8:173. doi: 10.1186/1743-422X-8-173.

PMID: 21496256
9

AV2 protein of tomato leaf curl Palampur virus promotes systemic necrosis in Nicotiana benthamiana and interacts with host Catalase2.

Roshan P, et al.  Sci Rep. 2018 Jan 19;8(1):1273. doi: 10.1038/s41598-018-19292-3.

PMID: 29352245
10

Identification of host cellular targets of AC4 and AV2 proteins of tomato leaf curl palampur virus and their sub-cellular localization studies.

Roshan P, et al.  Virusdisease. 2017 Dec;28(4):390-400. doi: 10.1007/s13337-017-0405-5. Epub 2017 Nov 17.

PMID: 29291230