Genus | Begomovirus |
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NCBI Assembly | GCF_000883635.1 |
Isolate | Nigeria |
Release date | 2015/2/22 |
Submitter | Kon,T., Rojas,M.R., Gilbertson,R.L. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_002643045.1 |
---|---|
Location | 176-526 |
Gene Name | V2 |
Protein Name | pre-coat protein |
Coding Region | ATGTGGGATCCATTATTGAACGAGTTCCCAGACTCGGTTCATGGTTTTCGTTGTATGCTGGGTATAAAATATCTACAGCTTTTAGAAGAGGAGTACGAGCCCAATACTTTGGGCCACGATTTAATTAGAGATCTCATATCTGTCATTCGGGCTAAGAATTATGTCGAAGCGACCCGGCGATATAATAATTTCCACGCCCGTCTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCCTACACCAGCCGTGCTGCTGTCCCCACTGTCCGAGGCATAAGCAAGCGTCGTTCGTGGACTTATCGGCCCATGTATCGAAAGCCCAGAATGTACCGGATGTTCAGAACCCCTGA |
Protein Sequence | MWDPLLNEFPDSVHGFRCMLGIKYLQLLEEEYEPNTLGHDLIRDLISVIRAKNYVEATRRYNNFHARLEGASSSELRQPLHQPCCCPHCPRHKQASFVDLSAHVSKAQNVPDVQNP |
NCBI Accession | YP_002643046.1 |
---|---|
Location | 336-1109 |
Gene Name | V1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGACCCGGCGATATAATAATTTCCACGCCCGTCTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCCTACACCAGCCGTGCTGCTGTCCCCACTGTCCGAGGCATAAGCAAGCGTCGTTCGTGGACTTATCGGCCCATGTATCGAAAGCCCAGAATGTACCGGATGTTCAGAACCCCTGACATCCCTCGTGGATGTGAAGGCCCATGTAAGGTCCAGTCGTATGAGCAGAGAGATGATGTCAAGCACGTGGGTATAGTTCGATGTGTTAGTGATGTGACCCGTGGGTCCGGTCTGACTCATAGAGTAGGGAAGAGATTTTGCATTAAGTCTATTTATATATTAGGTAAAGTTTGGATGGACGAAAACATCAAGAAGCAGAATCATACTAACAATGTTATGTTTTTCTTAGTTCGTGATCGTAGGCCTTATGGCAGCCCAAGTGATTTTGGACAGATTTTTAACATGTTTGACAACGAGCCCAGTACAGCCACAATCAAGAATGATCTCAGAGACCGTTATCAAGTGCTGCGTAAATTCAGTGCTACTGTTATTGGTGGTCCCTCTGGATGCAAGGAACAGGCTTTAGTGAAGAGATTTTTTAAAGTAAACAATCATGTCGTTTATAATCATCAGGAGGAGGCTAAATATGCCAACCATACTGAGAATGCTTTGTTGTTGTATATGGCTTGTACTCATGCCTCTAATCCAGTGTATGCTACTCTGAAAATACGCATCTATTTCTACGATGCAGTTACGAATTAA |
Protein Sequence | MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVPTVRGISKRRSWTYRPMYRKPRMYRMFRTPDIPRGCEGPCKVQSYEQRDDVKHVGIVRCVSDVTRGSGLTHRVGKRFCIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPYGSPSDFGQIFNMFDNEPSTATIKNDLRDRYQVLRKFSATVIGGPSGCKEQALVKRFFKVNNHVVYNHQEEAKYANHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN |
NCBI Accession | YP_002643047.1 |
---|---|
Location | 1106-1510 |
Gene Name | C3 |
Protein Name | REn |
Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCGCATCAAGCTCGGAATGGCGTTTTTATCTGGGAGATACAAAATCCCCTGTATTTCAAGATAACCAACCACGACGAGAGACCGTTCAACTACCAACACGACATAATCACAGTACAAATCAGGTTCAACCACAACCTGCGGAAGGCGTTGGGGATTCACAAGTGTTTTCTGAACTTCAAAGTCTGGACGAGCTTACGCCCTCAGACTGGTCGTTTCTTAAGGGTATTTAGGGTTCAAGTGTTAAAGTATTTAGATAATTTGGGTGTAATTTCAATTAATACAATTATTAGAGCTGTTGATCATGTACTGTATAACGTTCTTGTAAATACAATCGACGTTGTCGAAACACATGAAATAAAATTTAATATTTATTAA |
Protein Sequence | MDSRTGELITAHQARNGVFIWEIQNPLYFKITNHDERPFNYQHDIITVQIRFNHNLRKALGIHKCFLNFKVWTSLRPQTGRFLRVFRVQVLKYLDNLGVISINTIIRAVDHVLYNVLVNTIDVVETHEIKFNIY |
NCBI Accession | YP_002643048.1 |
---|---|
Location | 1251-1658 |
Gene Name | C2 |
Protein Name | TrAP |
Coding Region | ATGCGACCTTCGTCACCCTCAACGAGCCACTCTACTCAAGTGCCCATCAAAGTCCAGCACCGCATCGCGAAGAAGAAAGTAGTGAGGCGTAAGAGAGTGGACTTAGAGTGCGGGTGCTCGTACTTCATACATATTAACTGCAGTAACCATGGATTCACGCACAGGGGAACTCATCACTGCGCATCAAGCTCGGAATGGCGTTTTTATCTGGGAGATACAAAATCCCCTGTATTTCAAGATAACCAACCACGACGAGAGACCGTTCAACTACCAACACGACATAATCACAGTACAAATCAGGTTCAACCACAACCTGCGGAAGGCGTTGGGGATTCACAAGTGTTTTCTGAACTTCAAAGTCTGGACGAGCTTACGCCCTCAGACTGGTCGTTTCTTAAGGGTATTTAG |
Protein Sequence | MRPSSPSTSHSTQVPIKVQHRIAKKKVVRRKRVDLECGCSYFIHINCSNHGFTHRGTHHCASSSEWRFYLGDTKSPVFQDNQPRRETVQLPTRHNHSTNQVQPQPAEGVGDSQVFSELQSLDELTPSDWSFLKGI |
NCBI Accession | YP_002643049.1 |
---|---|
Location | 1567-2646 |
Gene Name | C1 |
Protein Name | replication-associated protein |
Coding Region | ATGGCTCCTCCAAAGAAATTTAGAATAAATTCCAAAAACTACTTCCTCACTTTCCCAAAATGCTCTATTTCTAAAGAAGAAGCCCTAGAGCAACTTCTAAAACTAGAAACCCCAACGAATAAAAAATATATCAAGATCTGCAGAGAACTTCACGAGGATGGCCAGCCTCATCTTCACGTGCTTCTGCAGTTCGAAGGCAAATACAACTGCCAAAATCAGAGATTCTTCGACCTGGTGTCCCCAACCAGGTCAGCACATTTCCATCCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGATACACTCGAATGGGGAGAGTTCCAGATCGATGGGAGATCTGCAAGAGGAGGGCAACAGACAGCCAATGACGCTTACGCCGCAGCGCTTAACGCAGGAAGTAAGGCAGAGGCTCTTAGGGTTATACGGGAATTAGCTCCCAAAGATTTTGTATTACAATTTCATAATTTAAATAATAATTTAGATAGAATTTTTCAGGAGCCTCCGGCTCCTTATGTTTCTCCTTTTTTATGTTCTTCTTTTAATCAAGTTCCGGAAGAACTTGAAGAGTGGGTCTCTGAGAATGTGAGCGATGCCGCTGCGCGGCCATGGAGACCGAATAGTATTGTTATTGAGGGTGATAGTCGTACCGGCAAGACGATGTGGGCTAGGTCATTAGGTCCACACAATTACTTGTGTGGGCATCTTGATCTTAGCCCAAAGGTGTATTCAAATGATGCTTGGTATAACGTCATTGATGACGTCGATCCCCATTACCTCAAACACTTCAAAGAATTTATGGGGGCCCAAAGAGACTGGCAAAGCAACACCAAGTACGGGAAGCCCATTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGTCCAACATCATCATATAAAGAGTATCTAGACGAGGAAAAGAATGCATCACTAAAAGCCTGGGCTATAAAAAATGCGACCTTCGTCACCCTCAACGAGCCACTCTACTCAAGTGCCCATCAAAGTCCAGCACCGCATCGCGAAGAAGAAAGTAGTGAGGCGTAA |
Protein Sequence | MAPPKKFRINSKNYFLTFPKCSISKEEALEQLLKLETPTNKKYIKICRELHEDGQPHLHVLLQFEGKYNCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKAEALRVIRELAPKDFVLQFHNLNNNLDRIFQEPPAPYVSPFLCSSFNQVPEELEEWVSENVSDAAARPWRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNASLKAWAIKNATFVTLNEPLYSSAHQSPAPHREEESSEA |
NCBI Accession | YP_002643050.1 |
---|---|
Location | 2187-2489 |
Gene Name | C4 |
Protein Name | C4 protein |
Coding Region | ATGGCCAGCCTCATCTTCACGTGCTTCTGCAGTTCGAAGGCAAATACAACTGCCAAAATCAGAGATTCTTCGACCTGGTGTCCCCAACCAGGTCAGCACATTTCCATCCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGATACACTCGAATGGGGAGAGTTCCAGATCGATGGGAGATCTGCAAGAGGAGGGCAACAGACAGCCAATGACGCTTACGCCGCAGCGCTTAACGCAGGAAGTAAGGCAGAGGCTCTTAGGGTTATACGGGAATTAG |
Protein Sequence | MASLIFTCFCSSKANTTAKIRDSSTWCPQPGQHISIQTYRELNPAPTSSPTSTRMEIHSNGESSRSMGDLQEEGNRQPMTLTPQRLTQEVRQRLLGLYGN |
1 |
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3 |
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