Genus | Begomovirus |
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NCBI Assembly | GCF_002824165.1 |
Isolate | India |
Release date | 2018/8/25 |
Submitter | Chaudhary,A., Kumar,R., Mukherjee,S.K. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009506526.1 |
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Location | 116-463 |
Gene Name | AV2 |
Protein Name | AV2 |
Coding Region | ATGTGGGATCCACTGGTTAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTGCCATCAAATATCTTCAGCTACTCTCTCAGGAATACTCTCCCGATACGGTAGGTTACGATCTAATACGCGATTTGATCTGTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCGTACGCGACCCGTGTGGCTGTCCCCACTGTCCGCGTCACAAAATCGCGAATGTGGGCGAACAGGCCCATGAATCGGAAGCCCAGAATTTACAGGATGTACAGAAGCCCTGA |
Protein Sequence | MWDPLVNEFPETVHGFRCMLAIKYLQLLSQEYSPDTVGYDLIRDLICILRSRNYVEASCRYRHFYPRVEGASASELRQPVRDPCGCPHCPRHKIANVGEQAHESEAQNLQDVQKP |
NCBI Accession | YP_009506527.1 |
---|---|
Location | 276-1046 |
Gene Name | AV1 |
Protein Name | AV1 |
Coding Region | ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCGTACGCGACCCGTGTGGCTGTCCCCACTGTCCGCGTCACAAAATCGCGAATGTGGGCGAACAGGCCCATGAATCGGAAGCCCAGAATTTACAGGATGTACAGAAGCCCTGATGTTCCAAAGGGCTGTGAGGGTCCATGTAAGGTACAGTCTTTCGAGTCCAGACACGATGTAGTGCATATAGGTAAGGTAATGTGCATCAGTGATGTCACCCGCGGTACTGGGCTGACCCATCGAGTAGGGAAGCGTTTCTGCGTGAAATCTGTTTATGTTTTGGGTAAGATATGGATGGATGAAAACATCAAGTCCAAAAATCATACTAACAATGTCATGTTCTTTCTCGCCCGTGATCGACGGCCCACTGACAAGCCTCAGGATTTTGGAGAGGTGTTCAACATGTTTGACAACGAGCCTAGCACTGCCACTGTGAAGAATATGCATCGAGACCGCTACCAGGTATTGCGTAAGTGGTATGCAACCGTCACGGGTGGACAGTATGGTGCAAAGGAACAGGCCCTTGTCAAGAAGTTTGTTAGGGTTAACAATTATGTAGTTTATAACCAGCAGGAGGCTGGTAAATATGAGAATCACACCGAGAATGCTCTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTACGCGACTCTTAAGATTAGGATTTACTTCTACGATTCTGTAACGAACTGA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYATRVAVPTVRVTKSRMWANRPMNRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLARDRRPTDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | YP_009506528.1 |
---|---|
Location | 1060-1452 |
Gene Name | AC3 |
Protein Name | AC3 |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGAGATTCCAAATCCCCTCTATTTCAAGCTCCTCAGCCACGACGTCCGTCCATTCACGACGAACATGGACATACTCACGATCAGGATCCAATTCAACTACAACCTCCGGAGAGCTCTGGGAGTGCACAAATGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAGACCCAAGTCCTCAAGTATCTCAACAATATCGGTGTAATATCAATTAATGCAATTATTAGGGCTGTAAATCATGTATTATGGAATAAATTAGAGCAAACTATGTATGTAGACCTGATCAGAAATAAAAATTAA |
Protein Sequence | MDSRTGEPITAAQAWNGAYIWEIPNPLYFKLLSHDVRPFTTNMDILTIRIQFNYNLRRALGVHKCFLTYRIWTTLHPPTGLFLRVFKTQVLKYLNNIGVISINAIIRAVNHVLWNKLEQTMYVDLIRNKN |
NCBI Accession | YP_009506529.1 |
---|---|
Location | 1145-1597 |
Gene Name | AC2 |
Protein Name | AC2 |
Coding Region | ATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGGCGCAACCGGAGGAGGAGAGTAGATCTTGAATGCGGGTGTTCTTATTATCTGTCCATCAACTGCCACAATCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGAGATTCCAAATCCCCTCTATTTCAAGCTCCTCAGCCACGACGTCCGTCCATTCACGACGAACATGGACATACTCACGATCAGGATCCAATTCAACTACAACCTCCGGAGAGCTCTGGGAGTGCACAAATGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAGACCCAAGTCCTCAAGTATCTCAACAATATCGGTGTAATATCAATTAA |
Protein Sequence | MRSSSPSKDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSINCHNHGFTHRGTHHCSSSMEWRLYLGDSKSPLFQAPQPRRPSIHDEHGHTHDQDPIQLQPPESSGSAQMFSDLPNLDDLTPSDWSFLKGIQDPSPQVSQQYRCNIN |
NCBI Accession | YP_009506530.1 |
---|---|
Location | 1494-2582 |
Gene Name | AC1 |
Protein Name | AC1 |
Coding Region | ATGCCTCCAAAGCGCTTCGTTATAAACTCCAAAAATTATTTCCTCACTTATCCTAAGTGCTCACTAACCAAAGAGGAAGCACTTTCCCAAATCCAGAATTTCCAAACCCCAACTTCAAAAAAATATATTAAAATCTGCCGAGAATTACATGAGAATGGGGAACCTCATCTGCACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATCGACAAGGACGGGGACACTCTCGAGTGGGGAGAGTTTCAGATCGATGGAAGATCAGCAAGAGGAGGACAACAGACAGCCAACGACGCTTACGCCGCAGCACTTAACGCAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAGGGAACTAGCTCCTAAAGATTTTGTACTACAATTTCATAATTTAAATGCAAATCTAGACAGAATCTTTCAGGAGCCACCGGCTCCCTATATTTCTCCTTTTTCTTCATCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGATTGGGCGTCCGAGAACGTTGTCGATCCCGCTGCGCGGCCCCTTAGACCTCAGAGTATAGTAATTGAGGGAGACAGTCGAACGGGGAAGACGATGTGGGCTAGGTCACTGGGACCACACAACTATTTGTGTGGACACCTGGACCTAAGTCCCAAAGTATACAGTAACGACGCTTGGTATAACGTCATTGATGACGTTGACCCGCACTTCCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGAGACTGGCAGTCCAACACAAAATACGGGAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTGTGCAATCCTGGTCCCAACAGCAGTTATAAGGAATTCCTCGACGAGGAAAAGAACACCGCATTAAAGAACTGGGCCGTCAAAAATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGGCGCAACCGGAGGAGGAGAGTAGATCTTGA |
Protein Sequence | MPPKRFVINSKNYFLTYPKCSLTKEEALSQIQNFQTPTSKKYIKICRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDFVLQFHNLNANLDRIFQEPPAPYISPFSSSSFDQVPEELEDWASENVVDPAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFVTLEGPLYSGSNQSTAQGSEEAQPEEESRS |
NCBI Accession | YP_009506531.1 |
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Location | 2126-2434 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGAGAATGGGGAACCTCATCTGCACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATCGACAAGGACGGGGACACTCTCGAGTGGGGAGAGTTTCAGATCGATGGAAGATCAGCAAGAGGAGGACAACAGACAGCCAACGACGCTTACGCCGCAGCACTTAACGCAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAGGGAACTAG |
Protein Sequence | MRMGNLICTCSSSSRGNTSARISDSSTWSPQAGQHISIRTFRELNQAPMSSPTSTRTGTLSSGESFRSMEDQQEEDNRQPTTLTPQHLTQAVSQRLLESLGN |
1 |
Occurrence of Tomato leaf curl New Delhi virus in tomato (Lycopersicon esculentum) in China. Li R, et al. Plant Dis. 2022 Oct 24. doi: 10.1094/PDIS-06-22-1427-PDN. Online ahead of print. PMID: 36281022 |
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2 |
Host Species-Dependent Transmission of Tomato Leaf Curl New Delhi Virus-ES by Bemisia tabaci. Janssen D, et al. Plants (Basel). 2022 Jan 30;11(3):390. doi: 10.3390/plants11030390. PMID: 35161372 |
3 |
First report of tomato leaf curl New Delhi virus infecting several cucurbit plants in China. Gu Q, et al. Plant Dis. 2023 Apr 20. doi: 10.1094/PDIS-01-23-0180-PDN. Online ahead of print. PMID: 37081636 |
4 |
Begomovirus Tomato Leaf Curl New Delhi Virus Is Seedborne but Not Seed Transmitted in Melon. Fortes IM, et al. Plant Dis. 2023 Feb;107(2):473-479. doi: 10.1094/PDIS-09-21-1930-RE. Epub 2023 Feb 15. PMID: 35771117 |
5 |
Occurrence of Tomato Leaf Curl New Delhi Virus in Cucurbit Plants in China. Zeng R, et al. Plant Dis. 2023 Mar 22. doi: 10.1094/PDIS-01-23-0059-PDN. Online ahead of print. PMID: 36947833 |
6 |
Taglienti A, et al. Front Microbiol. 2022 Apr 25;13:840893. doi: 10.3389/fmicb.2022.840893. eCollection 2022. PMID: 35547120 |
7 |
Venkataravanappa V, et al. 3 Biotech. 2020 Jun;10(6):282. doi: 10.1007/s13205-020-02245-x. Epub 2020 Jun 2. PMID: 32550101 |
8 |
Resistance Against Melon Chlorotic Mosaic Virus and Tomato Leaf Curl New Delhi Virus in Melon. Romay G, et al. Plant Dis. 2019 Nov;103(11):2913-2919. doi: 10.1094/PDIS-02-19-0298-RE. Epub 2019 Aug 20. PMID: 31436474 |
9 |
Sub-cellular localization of suppressor proteins of tomato leaf curl New Delhi virus. Sarkar M, et al. Virusdisease. 2021 Jun;32(2):298-304. doi: 10.1007/s13337-021-00651-0. Epub 2021 Apr 10. PMID: 34350318 |
10 |
Prasad A, et al. Theor Appl Genet. 2021 May;134(5):1463-1474. doi: 10.1007/s00122-021-03783-5. Epub 2021 Feb 7. PMID: 33554270 |