Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_002987035.1 |
Isolate | Comoros:Moheli, Fomboni |
Release date | 2018/8/26 |
Submitter | Lefeuvre,P., Martin,D.P., Hoareau,M., Naze,F., Becker,N., Delatte,H., Reynaud,B., Lett,J.M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009508191.1 |
---|---|
Location | 136-492 |
Gene Name | v2 |
Protein Name | V2 protein |
Coding Region | ATGTGGGATCCGGATCCACTCTTAAATGAGTTCCCAGACTCTGTTCACGGTTTTCGTTGTATGCTAGCTATCAAATATTTGCAGGCCATTGAGCAAACCTACGAGCCCAATACTTTGGGCCACGAATTGATTCGTGATCTCATATCCGTTATCAGAGCTCGTGACTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCTTCGAAGGTGCGTCGAAGGTTGAACTTCGACAGCCCGTTTACCAGCCGTGCTGTTGTCCCCATTGTCCCAGGCACAAGCAGACGTCGGTCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGA |
Protein Sequence | MWDPDPLLNEFPDSVHGFRCMLAIKYLQAIEQTYEPNTLGHELIRDLISVIRARDYVEATRRYNHFHARFEGASKVELRQPVYQPCCCPHCPRHKQTSVMDVQAHVSKAQDVQNVQKP |
NCBI Accession | YP_009508192.1 |
---|---|
Location | 302-1078 |
Gene Name | cp |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCTTCGAAGGTGCGTCGAAGGTTGAACTTCGACAGCCCGTTTACCAGCCGTGCTGTTGTCCCCATTGTCCCAGGCACAAGCAGACGTCGGTCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTCCAGTCTTATGAGCAGAGGGATGATGTTAAACATACTGGTATTGTTCGTTGTGTTAGTGATGTTACGCGTGGTCCGGGAATTACTCATAGAGTTGGCAAGAGGTTCTGTGTTAAGTCCATTTACATTTTAGGTAAGATATGGATGGATGAAAATATCAAGAAGCAGAATCACACTAATCAGGTTATGTTTTTTTTAGTCCGTGATAGAAGGCCCTATGGTGCAGCCCCAATGGATTTTGGGCAGGTGTTTAACATGTTTGATAATGAGCCCAGCACAGCTACGGTGAAGAATGATTTGAGAGACAGGTATCAGGTTTTGCGGAAGTTTCATGCAACTGTTGTAGGTGGGCCCTCTGGGATGAAGGAACAGGCGTTAGTTAAGAGATTTTTTAAGATTAATAGTCATGTAACATATAATCATCAGGAAGCAGCTAAGTATGAGAACCATACGGAGAATGCTTTGTTGTTGTATATGGCGTGTACTCATGCCTCTAATCCAGTGTATGCTACTCTTAAGATACGAATCTACTTCTACGATTCGATCGGTAATTAA |
Protein Sequence | MSKRPADIIISTPASKVRRRLNFDSPFTSRAVVPIVPGTSRRRSWTYRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGPGITHRVGKRFCVKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGAAPMDFGQVFNMFDNEPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN |
NCBI Accession | YP_009508193.1 |
---|---|
Location | 1075-1479 |
Gene Name | c3 |
Protein Name | C3 protein |
Coding Region | ATGGATTTTCGCACAGGGGAACTCATCACTGCAGCTCAAGCACAGAGTGGCGTGTTTATCTGGGAGATACAAAATCCCCTGTATTTCAAGATTATCGACCACGAGAACCGACCATTCAACATGCCCCACGACATCATATCAGTCCAGATAAGATTCAACCACAACTTGAGGAAGGAACTGGGGATTCACAAATGTTTTCTCAACTTCAGGGTCTGGACGAGCTCACAGCCTCAGACTGGTCTTTTCTTAAGGGTATTTAGGACTCAGGTTCTCAAGTATTTAGATAGATTAGGGGTTATTTCAATTAACGATGTAATTAGAGCAGTTTATCATGTATTGTATAATGTATTGAAAAATACTCTGCAAGTATCAGAAAATCATGAAATAAAATTTAATATTTATTAA |
Protein Sequence | MDFRTGELITAAQAQSGVFIWEIQNPLYFKIIDHENRPFNMPHDIISVQIRFNHNLRKELGIHKCFLNFRVWTSSQPQTGLFLRVFRTQVLKYLDRLGVISINDVIRAVYHVLYNVLKNTLQVSENHEIKFNIY |
NCBI Accession | YP_009508194.1 |
---|---|
Location | 1220-1627 |
Gene Name | c2 |
Protein Name | C2 protein |
Coding Region | ATGCGACCTTCGTCACCCTCCACGAGCCACTGTTCTCAAATACCAATCAAAGTCCAGCACAGAATAGCCAAGAAGAGGGCAGTGAGGCGTAGAAGGATTGATCTCGACTGCGGCTGCTCATACTATCTCCACATCAACTGCATCGACCATGGATTTTCGCACAGGGGAACTCATCACTGCAGCTCAAGCACAGAGTGGCGTGTTTATCTGGGAGATACAAAATCCCCTGTATTTCAAGATTATCGACCACGAGAACCGACCATTCAACATGCCCCACGACATCATATCAGTCCAGATAAGATTCAACCACAACTTGAGGAAGGAACTGGGGATTCACAAATGTTTTCTCAACTTCAGGGTCTGGACGAGCTCACAGCCTCAGACTGGTCTTTTCTTAAGGGTATTTAG |
Protein Sequence | MRPSSPSTSHCSQIPIKVQHRIAKKRAVRRRRIDLDCGCSYYLHINCIDHGFSHRGTHHCSSSTEWRVYLGDTKSPVFQDYRPREPTIQHAPRHHISPDKIQPQLEEGTGDSQMFSQLQGLDELTASDWSFLKGI |
NCBI Accession | YP_009508195.1 |
---|---|
Location | 2155-2457 |
Gene Name | c4 |
Protein Name | C4 protein |
Coding Region | ATGGGGAACCTCATCTGCATGCCCTTATTCAATTCGAGGGAAAACTCACGTGCACCAACAATCGCCTCTTCGATTGCGTACACCCAAGCAGTAGCACCTGTTTCCACCCCAACATACAAGGAGCTAAGTCCAGCTCTGACGTCAAGTCCTATCTGGACAAGGACGGAGACACCCTTGAGTGGGGAGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGACGCTTACGCCAAAGCTATTAACTCAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAGGGAGTTAG |
Protein Sequence | MGNLICMPLFNSRENSRAPTIASSIAYTQAVAPVSTPTYKELSPALTSSPIWTRTETPLSGESFRSMDDLQEGDNNQPMTLTPKLLTQAVSQRLLESLGS |
1 |
Kumar J, et al. Arch Virol. 2013 Jun;158(6):1349-53. doi: 10.1007/s00705-013-1613-y. Epub 2013 Jan 30. PMID: 23361863 |
---|---|
2 |
Kumar J, et al. Arch Virol. 2013 Jan;158(1):257-61. doi: 10.1007/s00705-012-1486-5. Epub 2012 Sep 29. PMID: 23053516 |
3 |
Kumar J, et al. Arch Virol. 2014 Aug;159(8):2109-13. doi: 10.1007/s00705-014-2039-x. Epub 2014 Mar 9. PMID: 24610555 |
4 |
Kumar J, et al. Virus Res. 2013 Dec 26;178(2):478-485. doi: 10.1016/j.virusres.2013.10.010. Epub 2013 Oct 25. PMID: 24512752 |