Tomato leaf curl Moheli virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_002987035.1 |
| Isolate |
Comoros:Moheli, Fomboni |
| Release date |
2018/8/26 |
| Submitter |
Lefeuvre,P., Martin,D.P., Hoareau,M., Naze,F., Becker,N., Delatte,H., Reynaud,B., Lett,J.M. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCCCGAAAAAGAAAAGTGGACCCTCCCCATGATTTATTGTCCGCCAATGAGAATCGCGCGTCAAAGCTTAGATAATTGTTTTTGTCTTTATATACTTGCTCGCCAAGGAGTTGTCCCACAAAATGTGGGATCCGGATCCACTCTTAAATGAGTTCCCAGACTCTGTTCACGGTTTTCGTTGTATGCTAGCTATCAAATATTTGCAGGCCATTGAGCAAACCTACGAGCCCAATACTTTGGGCCACGAATTGATTCGTGATCTCATATCCGTTATCAGAGCTCGTGACTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCTTCGAAGGTGCGTCGAAGGTTGAACTTCGACAGCCCGTTTACCAGCCGTGCTGTTGTCCCCATTGTCCCAGGCACAAGCAGACGTCGGTCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTCCAGTCTTATGAGCAGAGGGATGATGTTAAACATACTGGTATTGTTCGTTGTGTTAGTGATGTTACGCGTGGTCCGGGAATTACTCATAGAGTTGGCAAGAGGTTCTGTGTTAAGTCCATTTACATTTTAGGTAAGATATGGATGGATGAAAATATCAAGAAGCAGAATCACACTAATCAGGTTATGTTTTTTTTAGTCCGTGATAGAAGGCCCTATGGTGCAGCCCCAATGGATTTTGGGCAGGTGTTTAACATGTTTGATAATGAGCCCAGCACAGCTACGGTGAAGAATGATTTGAGAGACAGGTATCAGGTTTTGCGGAAGTTTCATGCAACTGTTGTAGGTGGGCCCTCTGGGATGAAGGAACAGGCGTTAGTTAAGAGATTTTTTAAGATTAATAGTCATGTAACATATAATCATCAGGAAGCAGCTAAGTATGAGAACCATACGGAGAATGCTTTGTTGTTGTATATGGCGTGTACTCATGCCTCTAATCCAGTGTATGCTACTCTTAAGATACGAATCTACTTCTACGATTCGATCGGTAATTAATAAATATTAAATTTTATTTCATGATTTTCTGATACTTGCAGAGTATTTTTCAATACATTATACAATACATGATAAACTGCTCTAATTACATCGTTAATTGAAATAACCCCTAATCTATCTAAATACTTGAGAACCTGAGTCCTAAATACCCTTAAGAAAAGACCAGTCTGAGGCTGTGAGCTCGTCCAGACCCTGAAGTTGAGAAAACATTTGTGAATCCCCAGTTCCTTCCTCAAGTTGTGGTTGAATCTTATCTGGACTGATATGATGTCGTGGGGCATGTTGAATGGTCGGTTCTCGTGGTCGATAATCTTGAAATACAGGGGATTTTGTATCTCCCAGATAAACACGCCACTCTGTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGAAAATCCATGGTCGATGCAGTTGATGTGGAGATAGTATGAGCAGCCGCAGTCGAGATCAATCCTTCTACGCCTCACTGCCCTCTTCTTGGCTATTCTGTGCTGGACTTTGATTGGTATTTGAGAACAGTGGCTCGTGGAGGGTGACGAAGGTCGCATTCTTTAGTGCCCAGTCTTTTAGTGGTGCATTCTTTTCCTCGTCTAGGAACTCTTTATACGAGGAAGTTGGTCCTGGATTGCAAAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATTGGCTTCCCGTATTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTGAAGTGCTTCAAATAATGCGGGTCCACGTCATCAATGACGTTGTACCACGCATCATTACTGTACACCTTTGGGCTGAGATCAAGATGACCACACAAGTAATTATGTGGACCCAATGATCTGGCCCACATTGTCTTCCCCGTCCGACTATCACCCTCAATCACAATGCTAATCGGTCTCCAAGGCCGCGCAGCGGAACCCATTACGTTCTCAGACACCCAGACTTCAAGTTCTTCCGGAACTTGATTAAAAGAAGAAGAAAGAAAAGGAGAAACATAAGGAGCCGGAGGCTCTTGAAAATCCTATCTAAATTACTATTTAAATTATGATACTGTAAAACAAAATCCTTTGGAGCTAACTCCCTAATGACTCTAAGAGCCTCTGACTTACTGCCTGAGTTAATAGCTTTGGCGTAAGCGTCATTGGCTGATTGTTGTCCCCCTCTTGCAGATCGTCCATCGATCTGAAACTCTCCCCACTCAAGGGTGTCTCCGTCCTTGTCCAGATAGGACTTGACGTCAGAGCTGGACTTAGCTCCTTGTATGTTGGGGTGGAAACAGGTGCTACTGCTTGGGTGTACGCAATCGAAGAGGCGATTGTTGGTGCACGTGAGTTTTCCCTCGAATTGAATAAGGGCATGCAGATGAGGTTCCCCATTCTGGTGGTGTTCAAGGCAGATTTTAATATATTTAGGGTTAGTTGGAAGTGAGAGGTTTTGTAAGAATGATAGAAGGTGTTCTTTGCTAAGAGAACACTTTGGATAAGTGAGGAAAATGTTTTTGGCTTGAATTTTAAAACGTGGAGTTCTCATGTTGACTTGGTCAATTGGAGACACTCGGCTGTAACTCTCTCTAATGAATTGGAGACAATATATAGTGTCTCCAAATGGCATTTCTGTAATAAGCCTCATTGTAATTTGAATTTTGAAATCCAAAAGCGGCCATCCGTATAATATT
Gene Information
|
NCBI Accession
|
YP_009508191.1
|
|
Location
|
136-492 |
|
Gene Name
|
v2 |
|
Protein Name
|
V2 protein |
|
Coding Region
|
ATGTGGGATCCGGATCCACTCTTAAATGAGTTCCCAGACTCTGTTCACGGTTTTCGTTGTATGCTAGCTATCAAATATTTGCAGGCCATTGAGCAAACCTACGAGCCCAATACTTTGGGCCACGAATTGATTCGTGATCTCATATCCGTTATCAGAGCTCGTGACTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCTTCGAAGGTGCGTCGAAGGTTGAACTTCGACAGCCCGTTTACCAGCCGTGCTGTTGTCCCCATTGTCCCAGGCACAAGCAGACGTCGGTCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGA |
|
Protein Sequence
|
MWDPDPLLNEFPDSVHGFRCMLAIKYLQAIEQTYEPNTLGHELIRDLISVIRARDYVEATRRYNHFHARFEGASKVELRQPVYQPCCCPHCPRHKQTSVMDVQAHVSKAQDVQNVQKP |
|
NCBI Accession
|
YP_009508192.1
|
|
Location
|
302-1078 |
|
Gene Name
|
cp |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCTTCGAAGGTGCGTCGAAGGTTGAACTTCGACAGCCCGTTTACCAGCCGTGCTGTTGTCCCCATTGTCCCAGGCACAAGCAGACGTCGGTCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTCCAGTCTTATGAGCAGAGGGATGATGTTAAACATACTGGTATTGTTCGTTGTGTTAGTGATGTTACGCGTGGTCCGGGAATTACTCATAGAGTTGGCAAGAGGTTCTGTGTTAAGTCCATTTACATTTTAGGTAAGATATGGATGGATGAAAATATCAAGAAGCAGAATCACACTAATCAGGTTATGTTTTTTTTAGTCCGTGATAGAAGGCCCTATGGTGCAGCCCCAATGGATTTTGGGCAGGTGTTTAACATGTTTGATAATGAGCCCAGCACAGCTACGGTGAAGAATGATTTGAGAGACAGGTATCAGGTTTTGCGGAAGTTTCATGCAACTGTTGTAGGTGGGCCCTCTGGGATGAAGGAACAGGCGTTAGTTAAGAGATTTTTTAAGATTAATAGTCATGTAACATATAATCATCAGGAAGCAGCTAAGTATGAGAACCATACGGAGAATGCTTTGTTGTTGTATATGGCGTGTACTCATGCCTCTAATCCAGTGTATGCTACTCTTAAGATACGAATCTACTTCTACGATTCGATCGGTAATTAA |
|
Protein Sequence
|
MSKRPADIIISTPASKVRRRLNFDSPFTSRAVVPIVPGTSRRRSWTYRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGPGITHRVGKRFCVKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGAAPMDFGQVFNMFDNEPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN |
|
NCBI Accession
|
YP_009508193.1
|
|
Location
|
1075-1479 |
|
Gene Name
|
c3 |
|
Protein Name
|
C3 protein |
|
Coding Region
|
ATGGATTTTCGCACAGGGGAACTCATCACTGCAGCTCAAGCACAGAGTGGCGTGTTTATCTGGGAGATACAAAATCCCCTGTATTTCAAGATTATCGACCACGAGAACCGACCATTCAACATGCCCCACGACATCATATCAGTCCAGATAAGATTCAACCACAACTTGAGGAAGGAACTGGGGATTCACAAATGTTTTCTCAACTTCAGGGTCTGGACGAGCTCACAGCCTCAGACTGGTCTTTTCTTAAGGGTATTTAGGACTCAGGTTCTCAAGTATTTAGATAGATTAGGGGTTATTTCAATTAACGATGTAATTAGAGCAGTTTATCATGTATTGTATAATGTATTGAAAAATACTCTGCAAGTATCAGAAAATCATGAAATAAAATTTAATATTTATTAA |
|
Protein Sequence
|
MDFRTGELITAAQAQSGVFIWEIQNPLYFKIIDHENRPFNMPHDIISVQIRFNHNLRKELGIHKCFLNFRVWTSSQPQTGLFLRVFRTQVLKYLDRLGVISINDVIRAVYHVLYNVLKNTLQVSENHEIKFNIY |
|
NCBI Accession
|
YP_009508194.1
|
|
Location
|
1220-1627 |
|
Gene Name
|
c2 |
|
Protein Name
|
C2 protein |
|
Coding Region
|
ATGCGACCTTCGTCACCCTCCACGAGCCACTGTTCTCAAATACCAATCAAAGTCCAGCACAGAATAGCCAAGAAGAGGGCAGTGAGGCGTAGAAGGATTGATCTCGACTGCGGCTGCTCATACTATCTCCACATCAACTGCATCGACCATGGATTTTCGCACAGGGGAACTCATCACTGCAGCTCAAGCACAGAGTGGCGTGTTTATCTGGGAGATACAAAATCCCCTGTATTTCAAGATTATCGACCACGAGAACCGACCATTCAACATGCCCCACGACATCATATCAGTCCAGATAAGATTCAACCACAACTTGAGGAAGGAACTGGGGATTCACAAATGTTTTCTCAACTTCAGGGTCTGGACGAGCTCACAGCCTCAGACTGGTCTTTTCTTAAGGGTATTTAG |
|
Protein Sequence
|
MRPSSPSTSHCSQIPIKVQHRIAKKRAVRRRRIDLDCGCSYYLHINCIDHGFSHRGTHHCSSSTEWRVYLGDTKSPVFQDYRPREPTIQHAPRHHISPDKIQPQLEEGTGDSQMFSQLQGLDELTASDWSFLKGI |
|
NCBI Accession
|
YP_009508195.1
|
|
Location
|
2155-2457 |
|
Gene Name
|
c4 |
|
Protein Name
|
C4 protein |
|
Coding Region
|
ATGGGGAACCTCATCTGCATGCCCTTATTCAATTCGAGGGAAAACTCACGTGCACCAACAATCGCCTCTTCGATTGCGTACACCCAAGCAGTAGCACCTGTTTCCACCCCAACATACAAGGAGCTAAGTCCAGCTCTGACGTCAAGTCCTATCTGGACAAGGACGGAGACACCCTTGAGTGGGGAGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGACGCTTACGCCAAAGCTATTAACTCAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAGGGAGTTAG |
|
Protein Sequence
|
MGNLICMPLFNSRENSRAPTIASSIAYTQAVAPVSTPTYKELSPALTSSPIWTRTETPLSGESFRSMDDLQEGDNNQPMTLTPKLLTQAVSQRLLESLGS |