Tomato leaf curl Kunene virus
Basic Information
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCCCTCATTTACAAAAGTAGTGGTGACAGGGACCACCACTAATAATTGTCGACCAATAAGATTTCAGCCTGAAAGCTAATTGGTTTAGTTTTGTCTTTATATACTTGGTGCCTAAGGATATTTTGAACTAAGTGGGAGCCACCCAAGCACGAGCTTGCCGTCGGTGCTTTTATGTGGGATCCATTATTACACGAGCTGCCGGAATCGGTGCACGGATTCCGGTGTATGCTTGCAAACAAATATCTTCAAGCCGTCGAAGAAACTTACGAGCCTAATACGCTAGGTTGGGAGTTAATTAGAGACCTTCTATCTGTCATCCGATCTAAAGATTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAGATACAGTCATTTGATCAGCGTGATTCTGTTGTCCATACGGGTACTGTTAGGTGTCTCAGCGATGTCACTAGGGGTGGTGGTCTTACACATCGCACTGGTAAACGCTTTTGTATTAAGTCTATATATGTATTAGGTAAGGTCTGGATGGACGAGAACGTGAAGAAGTCTAACCATACGAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGGCCAAGCCCACAGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGCTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCGTCAGGATGTAAGGAGGCTGCCATCGTTAAGAGATTTTTCCGTTTGAATCATCATGTTACTTACAACCATCAAGAGGCCGCAAAATACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGTATGTATTTCTATGATTCAGTTGGCAATTAATAAAGATCAAATTTTATATCATGATTCTCCCAAACATCTATTGTATTTACAAGTACATTATTTAATACATGATTGACCGCTCTAATTATAAAATTAATTGAAATTACACCAATTTGATCTAAATATTTCATTACTTGTGTTCTAAATACATTTAAGAAACGACCAGTCTGAGGACGTAAGCCCGTCCAGATCTGGAAGTTCAGAAAACATTTGTGAATCCCCAAAGCCCTCCTGAGGTTGTGGTTGAACCGTATTTGTATTGATATGATGTCGTGGTTGCATTGGAATGGCCTCTGGACGTGTCTCGTTATCTTGAAGTACAGGGGATTGGGTACTTCCCAGAAGAAGACGCCATTCCATGCTTGATGAGCAGTGATGTCTTCCCCTGTGCGCAAATCCATTTAAGGCGCAGTTGATGTGTATGAAGAATGAACAGCCACAATCTAGGTCAATCCTCTTCCGTCGCACCGCTTTCGCCTTGCCAATTTTGTGACGTACCTTTATTGGAACCTGAGTAGAGCGGCTCGTAGATGGTGACGAAGATCGCATTCTTGATAGTCCAGGCTTTCAGTGCTGCATTTTTTTCTTCGTCAAGATATTCTTTATATGATGATGTTGGTCCAGGATTGCAGAGGAAGATAGTGGGTATTCCCCCTTTAATTTGAATTGGCTTTCCGTATTTTGTGTTACTTTGCCAGTCTCTTTGGGCCCCCATAAATTCTTTGAAGTGTTTGAGGTAATGCGGATCAACGTCATCAATGACGTTGAACCATGCGTCGTTGGAATATACCTTTGGGCTTAGATCAAGATGCCCACACAAATAATTGTGTGGTCCTAATGACCTAGCCCACATTGTTTTTCCTGTACGACTATCACCCTCAATTACTATACTTATGGGCCTAATAGGCCGCGCAGCGGAACACACAACATTTTCAGCAGCCCATTCTTCAAGTTCCTGAGGGACTTGATCATAGGAAGAAGAAAGAAAAGGAGAAACATAAGGAGTCGGAGGCTCCTGAAAAATTCTATCTAAATTCGATTTTAAATTATGATATTGAAATATAAAATCTTTAGGGAGTTTCTCTCTAATAATAGCCATAGCAGCTTCAGCGGACCCTGCATTTAGGGCTTCTGCGGCGGCGTCATTAGCATTCTGACAACCTCCTCTAGCACTTCGTCCGTCGATTTGGAACTCTCCCCATTCGAGTGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCGGAACTTGATTTAGCTCCCTGAACGTTCGGATGGAAATGTGTTGACCTGGTTGGGGATACCAGGTCGAAGAATCTTTGATTCTTGCAGTTGAATTTACCCTCGAATTGGATAAGCACGTGGAGATGAGGCTCCCCATCTTCGTGAAGCTCTCGACAGACTTTTATATATTTTTTGTTCGTTGGTGTTTCTAGTTTTTGAAGTTGCTCTAGGGCTTCTTCCTTTGTAAGAGAACATTTTGGGAAAGTGAGGAAATAGTTTTTCGAATTTATTCGAAAATGCTTAGGAGGAGGCATTTGGTCAATGGGCACCGATTGACCTTATATTTCATTTACCCCATTATATTGGGGTCCTATATATACTATGCCCCAAATGGCATATATGTAAATTTGAAAAGATATAACTTTAATTTAAATCTTGTAGCGGCCATCCGTCTAATATT
Gene Information
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NCBI Accession
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QKE61400.1
|
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Location
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185-535 |
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Protein Name
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movement protein |
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Coding Region
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ATGTGGGATCCATTATTACACGAGCTGCCGGAATCGGTGCACGGATTCCGGTGTATGCTTGCAAACAAATATCTTCAAGCCGTCGAAGAAACTTACGAGCCTAATACGCTAGGTTGGGAGTTAATTAGAGACCTTCTATCTGTCATCCGATCTAAAGATTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGA |
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Protein Sequence
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MWDPLLHELPESVHGFRCMLANKYLQAVEETYEPNTLGWELIRDLLSVIRSKDYVEATRRYNHFHARLEGSSKAEFRQPIHQPCCCPHCPRHKQTSIMDVQAHVSKAQNVQNVQKP |
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NCBI Accession
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QKE61399.1
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Location
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345-1121 |
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Protein Name
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coat protein |
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Coding Region
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ATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAGATACAGTCATTTGATCAGCGTGATTCTGTTGTCCATACGGGTACTGTTAGGTGTCTCAGCGATGTCACTAGGGGTGGTGGTCTTACACATCGCACTGGTAAACGCTTTTGTATTAAGTCTATATATGTATTAGGTAAGGTCTGGATGGACGAGAACGTGAAGAAGTCTAACCATACGAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGGCCAAGCCCACAGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGCTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCGTCAGGATGTAAGGAGGCTGCCATCGTTAAGAGATTTTTCCGTTTGAATCATCATGTTACTTACAACCATCAAGAGGCCGCAAAATACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGTATGTATTTCTATGATTCAGTTGGCAATTAA |
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Protein Sequence
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MSKRPADIIISTPASKVRRRLNFDSPYTNRVAVPIAPGINKRRSWTYRPMYRKPRMYRMYKSPDVPRGCEGPCKIQSFDQRDSVVHTGTVRCLSDVTRGGGLTHRTGKRFCIKSIYVLGKVWMDENVKKSNHTNTCMFWVVRDRRPYGPSPQDFGQVFNMFDNEPSTATVQNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEAAKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSVGN |
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NCBI Accession
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QKE61403.1
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Location
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1118-1522 |
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Protein Name
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replication enhancer protein |
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Coding Region
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ATGGATTTGCGCACAGGGGAAGACATCACTGCTCATCAAGCATGGAATGGCGTCTTCTTCTGGGAAGTACCCAATCCCCTGTACTTCAAGATAACGAGACACGTCCAGAGGCCATTCCAATGCAACCACGACATCATATCAATACAAATACGGTTCAACCACAACCTCAGGAGGGCTTTGGGGATTCACAAATGTTTTCTGAACTTCCAGATCTGGACGGGCTTACGTCCTCAGACTGGTCGTTTCTTAAATGTATTTAGAACACAAGTAATGAAATATTTAGATCAAATTGGTGTAATTTCAATTAATTTTATAATTAGAGCGGTCAATCATGTATTAAATAATGTACTTGTAAATACAATAGATGTTTGGGAGAATCATGATATAAAATTTGATCTTTATTAA |
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Protein Sequence
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MDLRTGEDITAHQAWNGVFFWEVPNPLYFKITRHVQRPFQCNHDIISIQIRFNHNLRRALGIHKCFLNFQIWTGLRPQTGRFLNVFRTQVMKYLDQIGVISINFIIRAVNHVLNNVLVNTIDVWENHDIKFDLY |
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NCBI Accession
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QKE61402.1
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Location
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1263-1670 |
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Protein Name
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transcriptional activator protein |
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Coding Region
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ATGCGATCTTCGTCACCATCTACGAGCCGCTCTACTCAGGTTCCAATAAAGGTACGTCACAAAATTGGCAAGGCGAAAGCGGTGCGACGGAAGAGGATTGACCTAGATTGTGGCTGTTCATTCTTCATACACATCAACTGCGCCTTAAATGGATTTGCGCACAGGGGAAGACATCACTGCTCATCAAGCATGGAATGGCGTCTTCTTCTGGGAAGTACCCAATCCCCTGTACTTCAAGATAACGAGACACGTCCAGAGGCCATTCCAATGCAACCACGACATCATATCAATACAAATACGGTTCAACCACAACCTCAGGAGGGCTTTGGGGATTCACAAATGTTTTCTGAACTTCCAGATCTGGACGGGCTTACGTCCTCAGACTGGTCGTTTCTTAAATGTATTTAG |
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Protein Sequence
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MRSSSPSTSRSTQVPIKVRHKIGKAKAVRRKRIDLDCGCSFFIHINCALNGFAHRGRHHCSSSMEWRLLLGSTQSPVLQDNETRPEAIPMQPRHHINTNTVQPQPQEGFGDSQMFSELPDLDGLTSSDWSFLKCI |
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NCBI Accession
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QKE61401.1
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Location
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1570-2658 |
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Protein Name
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replication associated protein |
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Coding Region
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ATGCCTCCTCCTAAGCATTTTCGAATAAATTCGAAAAACTATTTCCTCACTTTCCCAAAATGTTCTCTTACAAAGGAAGAAGCCCTAGAGCAACTTCAAAAACTAGAAACACCAACGAACAAAAAATATATAAAAGTCTGTCGAGAGCTTCACGAAGATGGGGAGCCTCATCTCCACGTGCTTATCCAATTCGAGGGTAAATTCAACTGCAAGAATCAAAGATTCTTCGACCTGGTATCCCCAACCAGGTCAACACATTTCCATCCGAACGTTCAGGGAGCTAAATCAAGTTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTCGAATGGGGAGAGTTCCAAATCGACGGACGAAGTGCTAGAGGAGGTTGTCAGAATGCTAATGACGCCGCCGCAGAAGCCCTAAATGCAGGGTCCGCTGAAGCTGCTATGGCTATTATTAGAGAGAAACTCCCTAAAGATTTTATATTTCAATATCATAATTTAAAATCGAATTTAGATAGAATTTTTCAGGAGCCTCCGACTCCTTATGTTTCTCCTTTTCTTTCTTCTTCCTATGATCAAGTCCCTCAGGAACTTGAAGAATGGGCTGCTGAAAATGTTGTGTGTTCCGCTGCGCGGCCTATTAGGCCCATAAGTATAGTAATTGAGGGTGATAGTCGTACAGGAAAAACAATGTGGGCTAGGTCATTAGGACCACACAATTATTTGTGTGGGCATCTTGATCTAAGCCCAAAGGTATATTCCAACGACGCATGGTTCAACGTCATTGATGACGTTGATCCGCATTACCTCAAACACTTCAAAGAATTTATGGGGGCCCAAAGAGACTGGCAAAGTAACACAAAATACGGAAAGCCAATTCAAATTAAAGGGGGAATACCCACTATCTTCCTCTGCAATCCTGGACCAACATCATCATATAAAGAATATCTTGACGAAGAAAAAAATGCAGCACTGAAAGCCTGGACTATCAAGAATGCGATCTTCGTCACCATCTACGAGCCGCTCTACTCAGGTTCCAATAAAGGTACGTCACAAAATTGGCAAGGCGAAAGCGGTGCGACGGAAGAGGATTGA |
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Protein Sequence
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MPPPKHFRINSKNYFLTFPKCSLTKEEALEQLQKLETPTNKKYIKVCRELHEDGEPHLHVLIQFEGKFNCKNQRFFDLVSPTRSTHFHPNVQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGCQNANDAAAEALNAGSAEAAMAIIREKLPKDFIFQYHNLKSNLDRIFQEPPTPYVSPFLSSSYDQVPQELEEWAAENVVCSAARPIRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAALKAWTIKNAIFVTIYEPLYSGSNKGTSQNWQGESGATEED |
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NCBI Accession
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QKE61404.1
|
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Location
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2244-2501 |
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Protein Name
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C4 protein |
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Coding Region
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ATGGGGAGCCTCATCTCCACGTGCTTATCCAATTCGAGGGTAAATTCAACTGCAAGAATCAAAGATTCTTCGACCTGGTATCCCCAACCAGGTCAACACATTTCCATCCGAACGTTCAGGGAGCTAAATCAAGTTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTCGAATGGGGAGAGTTCCAAATCGACGGACGAAGTGCTAGAGGAGGTTGTCAGAATGCTAATGACGCCGCCGCAGAAGCCCTAA |
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Protein Sequence
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MGSLISTCLSNSRVNSTARIKDSSTWYPQPGQHISIRTFRELNQVPTSSPTSTRMETHSNGESSKSTDEVLEEVVRMLMTPPQKP |