Genus | Begomovirus |
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NCBI Assembly | GCF_014884275.1 |
Isolate | India |
Release date | 2021/6/1 |
Submitter | Manivannan,K., Renukadevi,P., Malathi,V.G., Balakrishnan,N., Karthikeyan,G. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_010087323.1 |
---|---|
Location | 401-1210 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGGCAATTGGGAACTATACGAAGACGCCCCCCAAGGGCTACGGTGTCCGTAATTATCGTAATTACGGACGGACATATCAGTTTCGAACTCTGAAGAACTGGCGACGGCCTGAAGGACGTTCTCTCCGATGGTTTCGTCGACCTTCGAAAGCTGTGGTCGACCTCTTTGGCGACGATTCGAGTAGGCAATTCCGGCCTAAGGAATTGACGGAGGTTCAACGTGGAACGGACTATGTCGTGTCCAACAACCGTTACGTAACTACTTATGTTACGTACCCCAGCAAGACCCGAATCGGAACGAGCAACCGCACGACATCGTTCATTAGAGTGAACGGCCTGAAGATGTCTGGGACTGTGTCCGTGCGATCTACTGGAATGGAGACGGATGTCGACAGCGTGCATGTCCCGTTTGGCTTGATGTCGATTGTTGTCGTCCGAGACAAGAAGCCCAAGCTGTATTCCGGTGCACAGCCGCTTATGCCGTTCGTGGAGCTGTTTGGTTCCGTTGAATCGTGCAAGGGCACTTTGAAGGTGGCCGATCAGCACAGAGATAGGTTTATTTTGTTGAGGCAGACGTCCTTCATGGTGACGGGTCTTCATGGGACGGCCATGAAGAGATTTAATGTTAGCAACTGCATTCCTTCGTCATACAACACGTGGGTCACGTTCAAGGACGAAGATGAGAACAATTGCACCGGTCAATATTCTAATACGGCGCGAAATGCGCTGCTTGTTTATTATGTTTGGTTGAGCGACGTCCCGTCGCATGCGGAAGTCTATAGCAACCTAACGTTGAATTATGTGGGGTAG |
Protein Sequence | MAIGNYTKTPPKGYGVRNYRNYGRTYQFRTLKNWRRPEGRSLRWFRRPSKAVVDLFGDDSSRQFRPKELTEVQRGTDYVVSNNRYVTTYVTYPSKTRIGTSNRTTSFIRVNGLKMSGTVSVRSTGMETDVDSVHVPFGLMSIVVVRDKKPKLYSGAQPLMPFVELFGSVESCKGTLKVADQHRDRFILLRQTSFMVTGLHGTAMKRFNVSNCIPSSYNTWVTFKDEDENNCTGQYSNTARNALLVYYVWLSDVPSHAEVYSNLTLNYVG |
NCBI Accession | YP_010087324.1 |
---|---|
Location | 1322-2179 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGTCGACGAGCAAGAGATACGAGAGCGGTGCGATTGGCGTGCTTCCTGGAGGATACATCAACTCAGAGCGAGTTGAGTACGCCCTAACAAACGATGCTACGGACGTGGTCCTGTCCTTTCCTTCAATGTTCGAACAGAAACTCAGCCAGCTTCGCAACCGGTGCATGAAGATAGACCACGTCGTCCTGGAGTATCGGAATCAGGTTCCGATAAACGCCCTTGGTCACGTCGTCATCGAAATTCACGACATGCGGTTGACAGAGGGCGACACCAAGCAGGCCGAATTCACGATTCCGATCAAATGCAACTGTAATCTGCACTACTACTCCTCCTCCTATTTCTCGATACGGGATAAAAACCCGTGGAGGGTCGAATACAGAGTGGAAGACACGAACGTGGTGAACGGCGTGCACTTCTGCAAGATCATGGGAAAGCTGCGGCTATCTTCTGCCAAACATTCCACAGACGTGGAATTCAAGCCGCCAAAGATAGAAATCCTAAGCAAAGAGTTCACCGTGAACGACATAGACTTCTGGGCCGTGGGTGCCAAGGCCCAATCAAGACGTCTGGTCGAAGGTGCAACCCTAACGGGCCTTCGCTCCAACTCCATGCGCGTTCCACACCTATCAATCAGGCCCAACGAGTCTTGGGCCAGCAGATCCGAAGTTGGGACCGGGTCCAGTTCCAGCAGGCCCTATCAAGGCCTGAACGCGCTGGACGACAACGCCATCGACCCTGGCCAGTCAGCATCACAAGTCGGAAGCTTCACGAAACACGACATAACAGAATTAATATCCAAAACAGTCGAACATTGTATACGATCTAATATCAACGCACCTGTAACAAAGGCCATTTAG |
Protein Sequence | MSTSKRYESGAIGVLPGGYINSERVEYALTNDATDVVLSFPSMFEQKLSQLRNRCMKIDHVVLEYRNQVPINALGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHYYSSSYFSIRDKNPWRVEYRVEDTNVVNGVHFCKIMGKLRLSSAKHSTDVEFKPPKIEILSKEFTVNDIDFWAVGAKAQSRRLVEGATLTGLRSNSMRVPHLSIRPNESWASRSEVGTGSSSSRPYQGLNALDDNAIDPGQSASQVGSFTKHDITELISKTVEHCIRSNINAPVTKAI |
NCBI Accession | YP_010087325.1 |
---|---|
Location | 120-458 |
Gene Name | AV2 |
Protein Name | pre coat protein |
Coding Region | ATGTGGGATCCACTTTTGCACGCGTTCCCTGACACCGTGCACGGCTTGCGTTGTATGCTAGCCGTAAAATACCTGCAGGAGGTTGAGAAGACGTATTCGCCGGATACGGTCGGATACGACTGGGTGCGCGACTTGATCCTTGTCGTTCGCGGCAGGAACTATGTCGAATCGAAAAGCAGATATCATCATTTCAACGCCCGCCTCGAAGGCACGCCGACGTCTGAATTTCGACAGCCCCTATGCGGCCCGTGCAGTTGTCCCCATTGTCCGAGGCACAAAGGCAAGGGTATGGGCCAACAGGCCCATGAACAGAAAGCCCAGGATCTACCGAATGTTTAG |
Protein Sequence | MWDPLLHAFPDTVHGLRCMLAVKYLQEVEKTYSPDTVGYDWVRDLILVVRGRNYVESKSRYHHFNARLEGTPTSEFRQPLCGPCSCPHCPRHKGKGMGQQAHEQKAQDLPNV |
NCBI Accession | YP_010087326.1 |
---|---|
Location | 280-1050 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAATCGAAAAGCAGATATCATCATTTCAACGCCCGCCTCGAAGGCACGCCGACGTCTGAATTTCGACAGCCCCTATGCGGCCCGTGCAGTTGTCCCCATTGTCCGAGGCACAAAGGCAAGGGTATGGGCCAACAGGCCCATGAACAGAAAGCCCAGGATCTACCGAATGTTTAGAAGCCCAGATGTACCACGGGGCTGTGAAGGCCCGTGTAAGGTACAGTCTTTCGAGTCCAGGCATGACGTGGCCCATATTGGGAAGGTGATGTGCGTTAGTGACGTGACGCGCGGGACCGGGCTGACGCATCGTGTCGGCAAGCGTTTCTGTGTCAAGTCTGTGTACGTGCTGGGTAAGGTGTGGATGGACGAGAACATCAAGACCAAAAATCACACAAATACTGTCATGTTCTTCCTTGTTCGTGGTAGGAGGCCTATTGACAAGCCTCAGGATTTCAGCGAGGTCTTCAACATGTTTGACAACGAGCCTAGCAGGGCTACCGTGATGAACATGCATCGTGATCGATATCAGGTTTTACGGAATTCACACACGACCGTGACGGGAGGAACGTATGCGTGCAGCCGGCACGCACTAGTTAGGAAGTTTATTAGGGTTAATAACTATGTTGTTTACAACCAACAAGAAGCGGGCAAGTATGAGAATCCCACAGACAATGCCCTTATGTTGTACATGGCGTCGACGCCGCATTCTAATCCTGTATATGCAACGCTGAAGATCCGGATCTATTTTTATGATTCGGTGTCCAATTAA |
Protein Sequence | MSNRKADIIISTPASKARRRLNFDSPYAARAVVPIVRGTKARVWANRPMNRKPRIYRMFRSPDVPRGCEGPCKVQSFESRHDVAHIGKVMCVSDVTRGTGLTHRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRGRRPIDKPQDFSEVFNMFDNEPSRATVMNMHRDRYQVLRNSHTTVTGGTYACSRHALVRKFIRVNNYVVYNQQEAGKYENPTDNALMLYMASTPHSNPVYATLKIRIYFYDSVSN |
NCBI Accession | YP_010087327.1 |
---|---|
Location | 1047-1595 |
Gene Name | AC2 |
Protein Name | transcription activator protein |
Coding Region | ATGCGCTCTTCATCACCCTCGAAGGTCCCCTCTATTCCGGCGGGAATCAAGGCGCAACACCGGAAGTGCAAGAGAGCAATCCGACGCAGGCGGATTGACTTGAAGTGCGGCTGCTCGTACTACTACTCCATCGACTGCCACGACCATGGATTCACGCACAGGGGAGTACATCACTGCAACTCAAGCAGAGAATGGCGCGTTTATCTGGACGGTACCAAATCCCCTCTATTTCAAGATAACAGACCACGCAGTCCGTCCGTCTTTCAGCCAACAGGACATCATAACAATCGAAATCAGATTCAACCACAACCTGAGGAGAGCTCTGCAGATTCACAAGTGTTTTCTAACCTACAAGGTCTGGACTGGTTTACAGCCTCAGACCTGGCTTTTTTTGAGGGTATTCAGGACGCAGTCCTGAAATATCTGGACATGTTAGGAGTAGTCAGCCTAAACAATGTAATTAGGGCAGTAGACCATGTTTTGTGGAACGTTATCCACAAAACAGAATATGTAGACCGCACTTATTCAATAAAATTCAATGTTTATTAA |
Protein Sequence | MRSSSPSKVPSIPAGIKAQHRKCKRAIRRRRIDLKCGCSYYYSIDCHDHGFTHRGVHHCNSSREWRVYLDGTKSPLFQDNRPRSPSVFQPTGHHNNRNQIQPQPEESSADSQVFSNLQGLDWFTASDLAFFEGIQDAVLKYLDMLGVVSLNNVIRAVDHVLWNVIHKTEYVDRTYSIKFNVY |
NCBI Accession | YP_010087328.1 |
---|---|
Location | 1178-1450 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAGTACATCACTGCAACTCAAGCAGAGAATGGCGCGTTTATCTGGACGGTACCAAATCCCCTCTATTTCAAGATAACAGACCACGCAGTCCGTCCGTCTTTCAGCCAACAGGACATCATAACAATCGAAATCAGATTCAACCACAACCTGAGGAGAGCTCTGCAGATTCACAAGTGTTTTCTAACCTACAAGGTCTGGACTGGTTTACAGCCTCAGACCTGGCTTTTTTTGAGGGTATTCAGGACGCAGTCCTGA |
Protein Sequence | MDSRTGEYITATQAENGAFIWTVPNPLYFKITDHAVRPSFSQQDIITIEIRFNHNLRRALQIHKCFLTYKVWTGLQPQTWLFLRVFRTQS |
NCBI Accession | YP_010087329.1 |
---|---|
Location | 1498-2583 |
Gene Name | AC1 |
Protein Name | replication initiation protein |
Coding Region | ATGCCTCGTCTCAAGAAATTTCTAGTGAGTGCCAAAAATGTTTTCCTCACTTTCCCAAAATGCCCTCTTTCAAAAGACACGATGCTTGAACTTCTTAAAAATATAGAGTGCCCTTCGGATAAATTATTCATACGAGTTGCGCAAGAGAGACACCAAGATGGGTCTCTGCACATCCACGCTCTTCTCCAGTTCAAGGGTAAGGCCCAGTTCAGAAACCCCAGACACTTCGATGTCACTCACCCTAATTGCTCCGCCACCTTCCACCCAAACTTCCAGGGAGCTAAGTCCAGCTCCGACGTTAAGTCATACATCGAGAAGGACGGTGATTACATCGACTGGGGTGTGTTTCAGATCGATGGACGATCTGCTCGAGGAGGTCAACAGACAGCTCACGATGCGGCAGCAGAGGCCCTAAATTCTGGTTCCGTGGAAGACGCACTTGCAATCCTTCGGGAAAAGCTCCCGAAGGACTTCCTATTCCAGTATCACAATTTAAAGGCCAATCTCGAACGGATTTTTTCAACTCCGTTAGAGCCGTTTGTTTCTCCTTATTCATTGAATTCATTCGATCTCGTTCCGCCAGAACTCGTCGATTGGGTGTCAAATAACGTTTGCAGTGCCGCTGCGCGGCCATTTAGACCCATAAGTATAGTTATCGAGGGTGATAGTAGAACGGGCAAGACAATGTGGGCGCGTTCACTGGGAACGCACAACTATCTCTGCGGGCATCTAGATCTCAGTCCCAAGATCTATTCCAACGATGCTTGGTACAACGTCATTGATGACGTCGACCCGCACTATCTAAAGCACTTCAAAGAGTTCATGGGGGCCCAGCGTGACTGGCAAAGCAACACGAAATACGGAAAGCCAGTCCACATAAAAGGCGGCATTCCCACTATCTTCCTCTGCAATCCAGGACCTAGCTCCAGCTATATAGAATATCTGGAAGAAGAAAAGAACGCCGCACTCAAAGCCTGGGTTCTGAAGAATGCGCTCTTCATCACCCTCGAAGGTCCCCTCTATTCCGGCGGGAATCAAGGCGCAACACCGGAAGTGCAAGAGAGCAATCCGACGCAGGCGGATTGA |
Protein Sequence | MPRLKKFLVSAKNVFLTFPKCPLSKDTMLELLKNIECPSDKLFIRVAQERHQDGSLHIHALLQFKGKAQFRNPRHFDVTHPNCSATFHPNFQGAKSSSDVKSYIEKDGDYIDWGVFQIDGRSARGGQQTAHDAAAEALNSGSVEDALAILREKLPKDFLFQYHNLKANLERIFSTPLEPFVSPYSLNSFDLVPPELVDWVSNNVCSAAARPFRPISIVIEGDSRTGKTMWARSLGTHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVHIKGGIPTIFLCNPGPSSSYIEYLEEEKNAALKAWVLKNALFITLEGPLYSGGNQGATPEVQESNPTQAD |
NCBI Accession | YP_010087330.1 |
---|---|
Location | 2169-2426 |
Gene Name | AC4 |
Protein Name | symptom determinant protein |
Coding Region | ATGGGTCTCTGCACATCCACGCTCTTCTCCAGTTCAAGGGTAAGGCCCAGTTCAGAAACCCCAGACACTTCGATGTCACTCACCCTAATTGCTCCGCCACCTTCCACCCAAACTTCCAGGGAGCTAAGTCCAGCTCCGACGTTAAGTCATACATCGAGAAGGACGGTGATTACATCGACTGGGGTGTGTTTCAGATCGATGGACGATCTGCTCGAGGAGGTCAACAGACAGCTCACGATGCGGCAGCAGAGGCCCTAA |
Protein Sequence | MGLCTSTLFSSSRVRPSSETPDTSMSLTLIAPPPSTQTSRELSPAPTLSHTSRRTVITSTGVCFRSMDDLLEEVNRQLTMRQQRP |
1 |
Lee HJ, et al. Plant Dis. 2022 Jan 24. doi: 10.1094/PDIS-11-21-2500-PDN. Online ahead of print. PMID: 35072507 |
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2 |
Ahsan M, et al. Plants (Basel). 2023 Oct 8;12(19):3503. doi: 10.3390/plants12193503. PMID: 37836243 |
3 |
A new seed-transmissible begomovirus in bitter gourd (Momordica charantia L.). Manivannan K, et al. Microb Pathog. 2019 Mar;128:82-89. doi: 10.1016/j.micpath.2018.12.036. Epub 2018 Dec 21. PMID: 30583019 |
4 |
First Report of Tomato leaf curl Palampur virus on Bitter Gourd in Pakistan. Ali I, et al. Plant Dis. 2010 Feb;94(2):276. doi: 10.1094/PDIS-94-2-0276A. PMID: 30754274 |
5 |
Kiran GVNSM, et al. 3 Biotech. 2021 Dec;11(12):500. doi: 10.1007/s13205-021-02975-6. Epub 2021 Nov 17. PMID: 34881163 |
6 |
Raj SK, et al. Int J Food Sci Nutr. 2005 May;56(3):185-92. doi: 10.1080/09637480500103946. PMID: 16009633 |
7 |
Seed Transmission of Begomoviruses: A Potential Threat for Bitter Gourd Cultivation. Gomathi Devi R, et al. Plants (Basel). 2023 Mar 21;12(6):1396. doi: 10.3390/plants12061396. PMID: 36987084 |
8 |
First Report of Cucurbit aphid-borne yellows virus infecting five cucurbits in India. Verma R, et al. Plant Dis. 2023 Oct 26. doi: 10.1094/PDIS-09-23-1719-PDN. Online ahead of print. PMID: 37883637 |
9 |
Arazi T, et al. Biochem Biophys Res Commun. 2002 Mar 29;292(2):441-8. doi: 10.1006/bbrc.2002.6653. PMID: 11906182 |