Tomato leaf curl Guangxi virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000868445.1
Isolate China:Guangxi
Release date 2015/2/13
Submitter Xu,Y.P., Cai,X.Z., Zhou,X.P.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_008329
ACCGGATGGCCGCGCAAAGTGTTAAAGTGGTCCCCCCTCCACTAACTGACAAAGACATGTCGGCCAATAAAAACGCTCCCTCAAAGTTAAATTAGTGGTGGTCCCTCTATTTAAACTTCCTTAGCAAGTAGTTCATTCCGCACTATGTGGGATCCATTGCTTAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGCATGTTAGCAATTAAGTATTTGCAGTTAGTAGAAAATACATACTCTCCGGATACGTTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTGTTCGTGCTCGAGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGATGTTCCACGAGCCTGTGAAGGGCCTTGCAAAGTCCAATCTTTCGATGCAAAGAATGATATCGGTCACATGGGTAAGGTCATATGTCTGTCTGGTGTTACTAGGGGAGTGGGTTTGACCCATCGTGTTGGTAAACGTTTCTGTGTTAAGTCACTGTATTTTGTTGGCAAGATTTGGATGGATGAAAACATCAAGGTGAAGAACCACACTAACACCGTTATGTTCTGGATAGTGAGGGATAGACGTCCTAGTGGAACTCCTAATGATTTTCAGCAGGTGTTTAATGTTTACGATAATGAACCTTCTACGGCTACCGTCAAGAACGACCATCGTGATCGTTTCCAGGTGTTGAGGAGGTTCCAGGCAACAGTTACTGGTGGACAGTATGCAGCTAAGGAGCAGGCGATAATTAGGAAGTTTTATCGTGTTAATAATCATGTTGTGTACAATCACCAAGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTCTTTTGTTGTACATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTAAGGAGTTATTTCTATGACTCCGTTACGAATTAATAAATATTGAATTTTATTATATGAGAATGTGTTACATATTCTGTTTTTTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACTCAAATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAACGAGTCCAGATCTGGAAGATCAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCGTTATGATGTCGTGGTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAATGGGCTTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCTGCATTCTTTAATGCCCAATCTTTTAATGCTGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGGCCTGGATTGCAAAGGAAGATACTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTTGGGCTTAGATCAAGATGTCCACACAAATAATTGTGTGGTCCCAGTGATCTGGCCCACATTGTTTTACCTGTACGACTATCACCTTCTATCACAATACTTTTGGGTCTCCAAGGCCGCGCAGCGGCACCACTCACATTCTCAGAAACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAAGAAATGGACAAACAAAAACCTCTAAAGGAGGTGCAAAAATCCTATCTAAGTTAGAGTTTAAATTATGAAATTGTAAAACATAATCTTTAGGAGCTAACTCCTTAATTACTCTAAGAGCCTCAGCCTTACTGCCGCTGTTAATTGCCTGGGCGTAAGCATCATTGGCTGATTGTTGACCCCCTCTTGCAGATCGTCCGTCGATCTGAAACTCTCCCCAGTCGAGGGTGTCTCCGTCCTTCTCCAGGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAGGTCGAAGAATCTGTTATTTTGGCATTTGTATTTGCCTTCGAATTGGATAAGCACGTGGAGATGAGGGCTCCCATCTTCATGAAGTTCGCTGCAGATTTTGATGTATTTTTTATTTGTTGGGGTGTTTAGGTTTTTTATTTGGGAAAGTGCCTCTTCTTTAGTAAGAGAGCATTGTGGATAAGTGAGGAAAAAGTTTTTGGCATATATTTGAAAACGCTTAGGAGGAGCCATTGACTTGGTCAATCGGTACTCAACAAACTTGGCTATGCAATCGGTGATTGGTACTCAATATATAGTGAGTACCAAATGGCATGATTGTAATTTCTTAAAGAAATTCAAATTGTAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_740293.1
Location 145-495
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCATTGCTTAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGCATGTTAGCAATTAAGTATTTGCAGTTAGTAGAAAATACATACTCTCCGGATACGTTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTGTTCGTGCTCGAGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVVRARDYVEASRRYSHFHSRIQGASSVEFRQPLYQPCCCHHCPRHKQKEIMGQSAHVSKAQDVQDVQKP

NCBI Accession YP_740294.1
Location 305-1078
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGATGTTCCACGAGCCTGTGAAGGGCCTTGCAAAGTCCAATCTTTCGATGCAAAGAATGATATCGGTCACATGGGTAAGGTCATATGTCTGTCTGGTGTTACTAGGGGAGTGGGTTTGACCCATCGTGTTGGTAAACGTTTCTGTGTTAAGTCACTGTATTTTGTTGGCAAGATTTGGATGGATGAAAACATCAAGGTGAAGAACCACACTAACACCGTTATGTTCTGGATAGTGAGGGATAGACGTCCTAGTGGAACTCCTAATGATTTTCAGCAGGTGTTTAATGTTTACGATAATGAACCTTCTACGGCTACCGTCAAGAACGACCATCGTGATCGTTTCCAGGTGTTGAGGAGGTTCCAGGCAACAGTTACTGGTGGACAGTATGCAGCTAAGGAGCAGGCGATAATTAGGAAGTTTTATCGTGTTAATAATCATGTTGTGTACAATCACCAAGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTCTTTTGTTGTACATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTAAGGAGTTATTTCTATGACTCCGTTACGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYTSRAAATTVLVTNKRKSWVNRPMYRKPRMYRMFRSPDVPRACEGPCKVQSFDAKNDIGHMGKVICLSGVTRGVGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEPSTATVKNDHRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_740295.1
Location 1075-1479
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGTTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATTTGAGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAAAACAGAATATGTAACACATTCTCATATAATAAAATTCAATATTTATTAA
Protein Sequence MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHDIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLSVISINNVIRACNHVLWDVLEKTEYVTHSHIIKFNIY

NCBI Accession YP_740296.1
Location 1220-1627
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCCATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGTTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG
Protein Sequence MQNSSPSTAHCTQVPIKVQHRIAKRKPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESVGNTPVFSDLPDLDSFTTSDLAFLKSI

NCBI Accession YP_740297.1
Location 1527-2615
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGGCTCCTCCTAAGCGTTTTCAAATATATGCCAAAAACTTTTTCCTCACTTATCCACAATGCTCTCTTACTAAAGAAGAGGCACTTTCCCAAATAAAAAACCTAAACACCCCAACAAATAAAAAATACATCAAAATCTGCAGCGAACTTCATGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAATACAAATGCCAAAATAACAGATTCTTCGACCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCCAGGCAATTAACAGCGGCAGTAAGGCTGAGGCTCTTAGAGTAATTAAGGAGTTAGCTCCTAAAGATTATGTTTTACAATTTCATAATTTAAACTCTAACTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGTTTGTCCATTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAATGTGAGTGGTGCCGCTGCGCGGCCTTGGAGACCCAAAAGTATTGTGATAGAAGGTGATAGTCGTACAGGTAAAACAATGTGGGCCAGATCACTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATCCCAAGTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCATTAAAAGATTGGGCATTAAAGAATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCCATTCGGAGACGGAGAGTTGA
Protein Sequence MAPPKRFQIYAKNFFLTYPQCSLTKEEALSQIKNLNTPTNKKYIKICSELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTLDWGEFQIDGRSARGGQQSANDAYAQAINSGSKAEALRVIKELAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPSIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAHSETES

NCBI Accession YP_740298.1
Location 2168-2464
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAATACAAATGCCAAAATAACAGATTCTTCGACCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCCAGGCAATTAACAGCGGCAGTAAGGCTGAGGCTCTTAGAGTAA
Protein Sequence MKMGALISTCLSNSKANTNAKITDSSTWSPQPGQHISIRTFRELNPAPTSSPTWRRTETPSTGESFRSTDDLQEGVNNQPMMLTPRQLTAAVRLRLLE

References More References in PubMed

1

Natural resistance of tomato plants to Tomato yellow leaf curl virus.

H El-Sappah A, et al.  Front Plant Sci. 2022 Dec 19;13:1081549. doi: 10.3389/fpls.2022.1081549. eCollection 2022.

PMID: 36600922
2

First Report of Tomato yellow leaf curl China virus with Betasatellite Infecting Panax notoginseng.

Li XJ, et al.  Plant Dis. 2014 Sep;98(9):1284. doi: 10.1094/PDIS-03-14-0255-PDN.

PMID: 30699620
3

Molecular characterization of tomato leaf curl China virus, infecting tomato plants in China, and functional analyses of its associated betasatellite.

Yang X, et al.  Appl Environ Microbiol. 2011 May;77(9):3092-101. doi: 10.1128/AEM.00017-11. Epub 2011 Mar 4.

PMID: 21378048
4

Molecular characterization and infectivity of Papaya leaf curl China virus infecting tomato in China.

Zhang H, et al.  J Zhejiang Univ Sci B. 2010 Feb;11(2):109-14. doi: 10.1631/jzus.B0900176.

PMID: 20104645
5

[Genomic characterization of tomato yellow leaf curl China virus and its associated satellite DNA infecting tobacco in Guangxi].

Xu YP, et al.  Wei Sheng Wu Xue Bao. 2006 Jun;46(3):358-62.

PMID: 16933601
6

Cryo-EM Structure of a Begomovirus Geminate Particle.

Xu X, et al.  Int J Mol Sci. 2019 Apr 8;20(7):1738. doi: 10.3390/ijms20071738.

PMID: 30965627
7

First Report of Potato Virus H on Solanum muricatum in China.

Abouelnasr H, et al.  Plant Dis. 2014 Jul;98(7):1016. doi: 10.1094/PDIS-01-14-0024-PDN.

PMID: 30708895