Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000868445.1 |
Isolate | China:Guangxi |
Release date | 2015/2/13 |
Submitter | Xu,Y.P., Cai,X.Z., Zhou,X.P. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_740293.1 |
---|---|
Location | 145-495 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGATCCATTGCTTAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGCATGTTAGCAATTAAGTATTTGCAGTTAGTAGAAAATACATACTCTCCGGATACGTTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTGTTCGTGCTCGAGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVVRARDYVEASRRYSHFHSRIQGASSVEFRQPLYQPCCCHHCPRHKQKEIMGQSAHVSKAQDVQDVQKP |
NCBI Accession | YP_740294.1 |
---|---|
Location | 305-1078 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGATGTTCCACGAGCCTGTGAAGGGCCTTGCAAAGTCCAATCTTTCGATGCAAAGAATGATATCGGTCACATGGGTAAGGTCATATGTCTGTCTGGTGTTACTAGGGGAGTGGGTTTGACCCATCGTGTTGGTAAACGTTTCTGTGTTAAGTCACTGTATTTTGTTGGCAAGATTTGGATGGATGAAAACATCAAGGTGAAGAACCACACTAACACCGTTATGTTCTGGATAGTGAGGGATAGACGTCCTAGTGGAACTCCTAATGATTTTCAGCAGGTGTTTAATGTTTACGATAATGAACCTTCTACGGCTACCGTCAAGAACGACCATCGTGATCGTTTCCAGGTGTTGAGGAGGTTCCAGGCAACAGTTACTGGTGGACAGTATGCAGCTAAGGAGCAGGCGATAATTAGGAAGTTTTATCGTGTTAATAATCATGTTGTGTACAATCACCAAGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTCTTTTGTTGTACATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTAAGGAGTTATTTCTATGACTCCGTTACGAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYTSRAAATTVLVTNKRKSWVNRPMYRKPRMYRMFRSPDVPRACEGPCKVQSFDAKNDIGHMGKVICLSGVTRGVGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEPSTATVKNDHRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
NCBI Accession | YP_740295.1 |
---|---|
Location | 1075-1479 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGTTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATTTGAGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAAAACAGAATATGTAACACATTCTCATATAATAAAATTCAATATTTATTAA |
Protein Sequence | MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHDIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLSVISINNVIRACNHVLWDVLEKTEYVTHSHIIKFNIY |
NCBI Accession | YP_740296.1 |
---|---|
Location | 1220-1627 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | ATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCCATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGTTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG |
Protein Sequence | MQNSSPSTAHCTQVPIKVQHRIAKRKPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESVGNTPVFSDLPDLDSFTTSDLAFLKSI |
NCBI Accession | YP_740297.1 |
---|---|
Location | 1527-2615 |
Gene Name | AC1 |
Protein Name | AC1 protein |
Coding Region | ATGGCTCCTCCTAAGCGTTTTCAAATATATGCCAAAAACTTTTTCCTCACTTATCCACAATGCTCTCTTACTAAAGAAGAGGCACTTTCCCAAATAAAAAACCTAAACACCCCAACAAATAAAAAATACATCAAAATCTGCAGCGAACTTCATGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAATACAAATGCCAAAATAACAGATTCTTCGACCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCCAGGCAATTAACAGCGGCAGTAAGGCTGAGGCTCTTAGAGTAATTAAGGAGTTAGCTCCTAAAGATTATGTTTTACAATTTCATAATTTAAACTCTAACTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGTTTGTCCATTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAATGTGAGTGGTGCCGCTGCGCGGCCTTGGAGACCCAAAAGTATTGTGATAGAAGGTGATAGTCGTACAGGTAAAACAATGTGGGCCAGATCACTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATCCCAAGTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCATTAAAAGATTGGGCATTAAAGAATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCCATTCGGAGACGGAGAGTTGA |
Protein Sequence | MAPPKRFQIYAKNFFLTYPQCSLTKEEALSQIKNLNTPTNKKYIKICSELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTLDWGEFQIDGRSARGGQQSANDAYAQAINSGSKAEALRVIKELAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPSIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAHSETES |
NCBI Accession | YP_740298.1 |
---|---|
Location | 2168-2464 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAATACAAATGCCAAAATAACAGATTCTTCGACCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCCAGGCAATTAACAGCGGCAGTAAGGCTGAGGCTCTTAGAGTAA |
Protein Sequence | MKMGALISTCLSNSKANTNAKITDSSTWSPQPGQHISIRTFRELNPAPTSSPTWRRTETPSTGESFRSTDDLQEGVNNQPMMLTPRQLTAAVRLRLLE |
1 |
Natural resistance of tomato plants to Tomato yellow leaf curl virus. H El-Sappah A, et al. Front Plant Sci. 2022 Dec 19;13:1081549. doi: 10.3389/fpls.2022.1081549. eCollection 2022. PMID: 36600922 |
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2 |
First Report of Tomato yellow leaf curl China virus with Betasatellite Infecting Panax notoginseng. Li XJ, et al. Plant Dis. 2014 Sep;98(9):1284. doi: 10.1094/PDIS-03-14-0255-PDN. PMID: 30699620 |
3 |
Yang X, et al. Appl Environ Microbiol. 2011 May;77(9):3092-101. doi: 10.1128/AEM.00017-11. Epub 2011 Mar 4. PMID: 21378048 |
4 |
Zhang H, et al. J Zhejiang Univ Sci B. 2010 Feb;11(2):109-14. doi: 10.1631/jzus.B0900176. PMID: 20104645 |
5 |
Xu YP, et al. Wei Sheng Wu Xue Bao. 2006 Jun;46(3):358-62. PMID: 16933601 |
6 |
Cryo-EM Structure of a Begomovirus Geminate Particle. Xu X, et al. Int J Mol Sci. 2019 Apr 8;20(7):1738. doi: 10.3390/ijms20071738. PMID: 30965627 |
7 |
First Report of Potato Virus H on Solanum muricatum in China. Abouelnasr H, et al. Plant Dis. 2014 Jul;98(7):1016. doi: 10.1094/PDIS-01-14-0024-PDN. PMID: 30708895 |