Tomato leaf curl China virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000842525.1 |
| Isolate | China:Guangxi |
| Release date | 2015/2/12 |
| Submitter | Ma,X., Zhou,X. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_005320
Gene Information
| NCBI Accession | NP_955737.1 |
|---|---|
| Location | 131-481 |
| Gene Name | AV2 |
| Protein Name | AV2 protein |
| Coding Region | ATGTGGGATCCTTTACTGAATGAGTTTCCCGAAACCGTACATGGTTTCAGGTGTATGTTAGCCATCAAGTATTTGCAGCTGGTAGAAAATACATACTCCCCTGATACTTTAGGGTACGATTTAATTCGTGATTTAATTTTAGTCGTCCGTGCTAGAGATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAACTTCGACAGCCCGTATGCCAGCCGTGCTGCTGTCCCCACTGTCCTCGTCACAAATCGAAAGCGATCATGGACCAACAGGCCCATGAATCGAAAGCCGAAAATGTACAGGATGTACAGAAGCCCTGA |
| Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVVRARDYVEASRRYSHFHSRIQGASPAELRQPVCQPCCCPHCPRHKSKAIMDQQAHESKAENVQDVQKP |
| NCBI Accession | NP_955738.1 |
|---|---|
| Location | 291-1064 |
| Gene Name | AV1 |
| Protein Name | AV1 protein |
| Coding Region | ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAACTTCGACAGCCCGTATGCCAGCCGTGCTGCTGTCCCCACTGTCCTCGTCACAAATCGAAAGCGATCATGGACCAACAGGCCCATGAATCGAAAGCCGAAAATGTACAGGATGTACAGAAGCCCTGATGTCCCTAGAGGATGTGAGGGTCCATGTAAGGTCCAGTCGTTTGATGCTAAGAACGATATTGGTCACATGGGTAAGGTTATATGTTTGTCCGATGTTACGAGGGGAAATGGTTTGACTCATCGAGTTGGTAAACGTTTCTGCGTTAAGTCGTTGTATTTTGTGGGCAAGATTTGGATGGATGAGAACATCAAGGTTAAGAACCACACTAACACCGTTTTGTTCTGGATTGTCCGAGACAGGCGTCCTAGTGGCACCCCTAGTGATTTTCAGCAGGTTTTTAATGTTTATGATAACGAGCCGTCTACCGCTACTGTGAAGAACGATCAGCGTGATCGTTACCAAGTGATACGCAGGTTTCAGGCAACGGTGACTGGTGGACAATATGCAGCTAAGGAACAGGCGATAATTAGAAGATTTTATCGTGTTAATAATTACGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTCTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTGAGGAGTTATTTCTATGACTCAGTCACGAATTAA |
| Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYASRAAVPTVLVTNRKRSWTNRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGNGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPSGTPSDFQQVFNVYDNEPSTATVKNDQRDRYQVIRRFQATVTGGQYAAKEQAIIRRFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
| NCBI Accession | NP_955739.1 |
|---|---|
| Location | 1061-1465 |
| Gene Name | AC3 |
| Protein Name | AC3 protein |
| Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCAACTCAGGCAGAGAATGGCGTTTTTACTTGGGAGATAACAAATCCCCTATATTTCAAGATAACGGAACTACGAAACAGGCCCTTCCTGTCGGACAACGACATAGTGACGGTCAGGATCCAATTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAATGTTTTCTGGACTTCCGGATATGGACGAACTCACACCTTCAGACTGGTCGTTTCTTAAGAGTATTTAGGACACAAGTTTTGAAGTTTCTCAGTAATTTAGGTGTCATTAGTTTAAATAATGTAATTAGAGCAGTGAATTATGTATTATGGGACGCATTAACGCAAACAACATTTGTACAAAGTTCTCATGTAATAAAATTTAATCTTTATTAA |
| Protein Sequence | MDSRTGELITATQAENGVFTWEITNPLYFKITELRNRPFLSDNDIVTVRIQFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLSNLGVISLNNVIRAVNYVLWDALTQTTFVQSSHVIKFNLY |
| NCBI Accession | NP_955740.1 |
|---|---|
| Location | 1206-1613 |
| Gene Name | AC2 |
| Protein Name | AC2 protein |
| Coding Region | ATGCAGTCTTCGTCAGCATCACCGAGCCACTGTACTCAAGTACCTATCAAAGTCCAGCACAGGATAGCCAAGAAGAAAATAACCAGGAGACGGAGGATTGACCTTCCCTGTGGTTGTTCTTATTTCAGCTCACTTAACTGCGCCAACCATGGATTCACGCACAGGGGAACTCATCACTGCAACTCAGGCAGAGAATGGCGTTTTTACTTGGGAGATAACAAATCCCCTATATTTCAAGATAACGGAACTACGAAACAGGCCCTTCCTGTCGGACAACGACATAGTGACGGTCAGGATCCAATTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAATGTTTTCTGGACTTCCGGATATGGACGAACTCACACCTTCAGACTGGTCGTTTCTTAAGAGTATTTAG |
| Protein Sequence | MQSSSASPSHCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSSLNCANHGFTHRGTHHCNSGREWRFYLGDNKSPIFQDNGTTKQALPVGQRHSDGQDPIQLQPEESTGDAPMFSGLPDMDELTPSDWSFLKSI |
| NCBI Accession | NP_955741.1 |
|---|---|
| Location | 1513-2601 |
| Gene Name | AC1 |
| Protein Name | AC1 protein |
| Coding Region | ATGGCTCCCCCAAATAAATTCAGAATTAATGCCAAAAATTATTTCCTCACATATCCACACTGCTCTCTCACTAAAGAAGAAGCACTTTCCCAAATTAAAACCCTAGAAACCCCAGTAAATAAACTATTTATCCGCATCTGCAGAGAATTACACGAAGATGGGTCTCCTCACCTGCATGTGCTCATCCAATTCGAAGGAAAATTCCAGTGTAAAAATCAAAGATTCTTCGATCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGCAGCTAAAAGCTCAACAGATGTCAAGTCCTACATGGACAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTTCGGCCCTCAATATACTAAAGGAGAAAGCTCCTAAAGATTATGTTTTACAATTTCATAATTTAAATAATAATTTAGATAGGATTTTTACTCCTCAGATGGAGGTTTATGTTTCGCCTTTTTCTTCTTCTTCGTTTGATCGAGTTCCAGAGGAACTCGAAGACTGGGCTGCAGAGAACGTCGTCAGTTCCGCTGCGCGGCCATTACGACCAATAAGTATAGTTATCGAAGGCGATAGTCGGACGGGGAAGACGATGTGGGCCAGGTCATTAGGACGCCATAATTATTTGTGTGGTCATCTTGATTTGAGTCCAAAGGTATACAATAATGACGCCTGGTACAACGTCATTGATGACGTAGATCCGCACTACCTAAAGCATTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGAAAGCCTGTTCAAATTAAAGGTGGCATTCCCGCTATCTTCCTATGCAATCCAGGGCCCAACTCAAGCTATAAAGAATACCTAGACGAGGAAAAGAATACTGCATTAAAGTCGTGGGCAATAAAAAATGCAGTCTTCGTCAGCATCACCGAGCCACTGTACTCAAGTACCTATCAAAGTCCAGCACAGGATAGCCAAGAAGAAAATAACCAGGAGACGGAGGATTGA |
| Protein Sequence | MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIKTLETPVNKLFIRICRELHEDGSPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKSYMDKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILKEKAPKDYVLQFHNLNNNLDRIFTPQMEVYVSPFSSSSFDRVPEELEDWAAENVVSSAARPLRPISIVIEGDSRTGKTMWARSLGRHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAVFVSITEPLYSSTYQSPAQDSQEENNQETED |
| NCBI Accession | NP_955742.1 |
|---|---|
| Location | 2151-2444 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGTCTCCTCACCTGCATGTGCTCATCCAATTCGAAGGAAAATTCCAGTGTAAAAATCAAAGATTCTTCGATCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGCAGCTAAAAGCTCAACAGATGTCAAGTCCTACATGGACAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTTCGGCCCTCAATATACTAA |
| Protein Sequence | MGLLTCMCSSNSKENSSVKIKDSSISHPQAGQHISIRTFRQLKAQQMSSPTWTKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY |
References More References in PubMed
| 1 |
Tomato leaf curl New Delhi virus: an emerging plant begomovirus threatening cucurbit production. Cai L, et al. aBIOTECH. 2023 Oct 25;4(3):257-266. doi: 10.1007/s42994-023-00118-4. eCollection 2023 Sep. PMID: 37970471 |
|---|---|
| 2 |
First report of squash leaf curl China virus infecting tomato in China. Qiu Y, et al. Plant Dis. 2022 Feb 27. doi: 10.1094/PDIS-10-21-2192-PDN. Online ahead of print. PMID: 35224985 |
| 3 |
Natural resistance of tomato plants to Tomato yellow leaf curl virus. H El-Sappah A, et al. Front Plant Sci. 2022 Dec 19;13:1081549. doi: 10.3389/fpls.2022.1081549. eCollection 2022. PMID: 36600922 |
| 4 |
Occurrence of Tomato leaf curl New Delhi virus in tomato (Lycopersicon esculentum) in China. Li R, et al. Plant Dis. 2022 Oct 24. doi: 10.1094/PDIS-06-22-1427-PDN. Online ahead of print. PMID: 36281022 |
| 5 |
Zhou Y, et al. Lett Appl Microbiol. 2022 May;74(5):640-646. doi: 10.1111/lam.13611. Epub 2021 Dec 14. PMID: 34822723 |
| 6 |
Occurrence of Tomato Leaf Curl New Delhi Virus in Cucurbit Plants in China. Zeng R, et al. Plant Dis. 2023 Mar 22. doi: 10.1094/PDIS-01-23-0059-PDN. Online ahead of print. PMID: 36947833 |
| 7 |
Tobacco leaf curl Puer virus: a novel monopartite begomovirus infecting Nicotiana tabacum in China. Jiang N, et al. Arch Virol. 2022 Jan;167(1):229-232. doi: 10.1007/s00705-021-05267-9. Epub 2021 Oct 15. PMID: 34652555 |
| 8 |
First Report of Tomato Yellow Leaf Curl Virus Infecting Pepper and Tomato in Oklahoma. Paslay C, et al. Plant Dis. 2022 Aug 12. doi: 10.1094/PDIS-04-22-0927-PDN. Online ahead of print. PMID: 35961018 |
| 9 |
Resistance to Tomato Yellow Leaf Curl Virus in Tomato Germplasm. Yan Z, et al. Front Plant Sci. 2018 Aug 20;9:1198. doi: 10.3389/fpls.2018.01198. eCollection 2018. PMID: 30177938 |
| 10 |
Naganur P, et al. Plants (Basel). 2023 Jan 20;12(3):490. doi: 10.3390/plants12030490. PMID: 36771575 |