Genus | Begomovirus |
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NCBI Assembly | GCF_001046705.1 |
Isolate | India |
Release date | 2018/10/31 |
Submitter | Jose,J., Usha,R. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_579971.1 |
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Location | 120-485 |
Gene Name | AV2 |
Protein Name | precoat protein AV2 |
Coding Region | ATGTGGGATCCACTATTAAACGAATTTCCGGATACGGTTCACGGGTTTCGTTGTATGCTATCTCTAAAATATTTGCAACTTTTGTCGCAGGATTATTCTCCAGATACGCTTGGGTACGAGTTAATACGGGATTTAATTTGTATTTTACGTTCCCGTAATTATGTCGAAGCGAGCTGCCGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAACAACAGGCATGGACAAACAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAGGGGATGTGA |
Protein Sequence | MWDPLLNEFPDTVHGFRCMLSLKYLQLLSQDYSPDTLGYELIRDLICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQETQNVPDVQKSGCSKGM |
NCBI Accession | NP_579972.1 |
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Location | 280-1050 |
Gene Name | AV1 |
Protein Name | coat protein AV1 |
Coding Region | ATGTCGAAGCGAGCTGCCGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAACAACAGGCATGGACAAACAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAGGGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAGTCTCGACACGATGTCGTTCATATTGGTAAGGTAATGTGTATTTCGGATGTTACGCGTGGAGTCGGTTTGACCCATCGTATAGGTAAGCGTTTTTGTGTCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAACATCAAGACGAAGAACCATACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGACGACCGGTAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAATGAGCCCAGTACGGCGACCGTGAAGAACATGCATAGGGATCGTTACCAGGTGTTGAGGAAATGGCATGCAACCGTTACTGGTGGTCAATATGCAGCGAGGGAACAGGCGTTGGTTAAGAAATTTGTCAGGGTTAACAATTATGTTGTTTACAACCAGCAGGAGGCAGGAAAATACGAGAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCAGTGTATGCTACGCTTAAGATTCGGATTTATTTTTATGACTCTGTAACGAATTGA |
Protein Sequence | MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWTNRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHRIGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYAAREQALVKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | NP_579973.1 |
---|---|
Location | 628-984 |
Gene Name | AC5 |
Protein Name | AC5 protein |
Coding Region | ATGGGTACAAGCCATATAAAGCATCAATGCATTCTCGGTGTGATTCTCGTATTTTCCTGCCTCCTGCTGGTTGTAAACAACATAATTGTTAACCCTGACAAATTTCTTAACCAACGCCTGTTCCCTCGCTGCATATTGACCACCAGTAACGGTTGCATGCCATTTCCTCAACACCTGGTAACGATCCCTATGCATGTTCTTCACGGTCGCCGTACTGGGCTCATTATCAAACATATTAAATACTTCACCAAAATCTTGTGGTTTATCTACCGGTCGTCGATCACGAACAAGGAAAAACATCACCGAATTCGTATGGTTCTTCGTCTTGATGTTCTCGTCCATCCATATCTTACCTAA |
Protein Sequence | MGTSHIKHQCILGVILVFSCLLLVVNNIIVNPDKFLNQRLFPRCILTTSNGCMPFPQHLVTIPMHVLHGRRTGLIIKHIKYFTKILWFIYRSSITNKEKHHRIRMVLRLDVLVHPYLT |
NCBI Accession | NP_579974.1 |
---|---|
Location | 1052-1456 |
Gene Name | AC3 |
Protein Name | replication enhancer protein AC3 |
Coding Region | ATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCAAGCAAAGAATGGCGTCTATATCTGGAAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAACCACGACAACCGTCCATTCACGACGAACATGGACATAATAACACTCAGGATCCATTTCAACTACAACCTACGGAAAGCTCTGGGAATACACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAATAATCTAGGTGTAATCTCACTTAATTTAGTTATTAAAGCCGTCGAACATGTATTGTACAATGTAGTTAATCAGACAATGTATGTAGACCAATATTCAGATATAAAATTCAAACTTTATTAA |
Protein Sequence | MDSRTGERITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDIITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNLVIKAVEHVLYNVVNQTMYVDQYSDIKFKLY |
NCBI Accession | NP_579975.1 |
---|---|
Location | 1170-1601 |
Gene Name | AC2 |
Protein Name | transcriptional activator protein AC2 |
Coding Region | ATGCAGCATTCGTCTTTCTCACCCAACCGTTGTACTCGGGTACCAATCAAAGTTCAACACAAGGAAGCGAAGCGAGTGCACAGGAGGAGACGAGTGGACCTTGAATGCGGATGCAGTTATTATCTTAGCATCAACTGCCACAACCATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCAAGCAAAGAATGGCGTCTATATCTGGAAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAACCACGACAACCGTCCATTCACGACGAACATGGACATAATAACACTCAGGATCCATTTCAACTACAACCTACGGAAAGCTCTGGGAATACACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAATAA |
Protein Sequence | MQHSSFSPNRCTRVPIKVQHKEAKRVHRRRRVDLECGCSYYLSINCHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQPTESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQ |
NCBI Accession | NP_579976.1 |
---|---|
Location | 1498-2586 |
Gene Name | AC1 |
Protein Name | replicase AC1 |
Coding Region | ATGCCTCCAAGGCGTTTTGTCATCAATTCCAAAAATTATTTCCTTACTTATCCACAATGCTCTCTTAATAAAGAAGAGGCATTATCCCAACTACAAAATATACAAACCCCAACAAATAAAAAATACATAAAGATCTGCAGTGAGCTTCATGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGAAAATACAAGTGCCAGAATCAGAGATTCTTCGACTTGGTCGCCACAAACAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGATACCCTTGAATGGGGGGAATTCCAGATCGACGGCAGATCTGCAAGGGGAGGACAACAATCAGCCAATGACGCTTACGCGGCAGCACTTAACACAGGAAGTAAGGCAGAGGCTCTTAGAGTTCTTAAAGAATTAGCCCCCAAAGATTATGTCTTACAATATCATAATTTAAATTCAAATTTAGATAGGATTTTTACTCCTCCTCAGGAGGTTTATGTTTGTCCATTTTTATCTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTCGGAGAACGTCATGGACGCCGCTGCGCGGCCTCAGAGACCTTTGAGTTTAGTTCTAGAGGGGGAGTCTAGAACTGGGAAAACACAATGGGCCCGTTCCTTGGGGCCACATAATTATTTATGTGGGCACTTGGATCTAAGCCCTAAAGTGTATTCAAACGATGCGTGGTTCAACATTATAGATGATGTTGACCCGCATTATCTGAAACACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGAGGCATTCCAACAATCTTCCTCTGCAATCCAGGCCCCAACGCAAGCTATAAAGAGTTTTTAGACGAGGAAAAGAACTCAGCTTTGAAAGCGTGGGCTTTAAAAAATGCAGCATTCGTCTTTCTCACCCAACCGTTGTACTCGGGTACCAATCAAAGTTCAACACAAGGAAGCGAAGCGAGTGCACAGGAGGAGACGAGTGGACCTTGA |
Protein Sequence | MPPRRFVINSKNYFLTYPQCSLNKEEALSQLQNIQTPTNKKYIKICSELHENGEPHLHVLIQFEGKYKCQNQRFFDLVATNRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKAEALRVLKELAPKDYVLQYHNLNSNLDRIFTPPQEVYVCPFLSSSFDQVPEELEEWASENVMDAAARPQRPLSLVLEGESRTGKTQWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTQPLYSGTNQSSTQGSEASAQEETSGP |
NCBI Accession | NP_579977.1 |
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Location | 2130-2438 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGAAAATACAAGTGCCAGAATCAGAGATTCTTCGACTTGGTCGCCACAAACAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGATACCCTTGAATGGGGGGAATTCCAGATCGACGGCAGATCTGCAAGGGGAGGACAACAATCAGCCAATGACGCTTACGCGGCAGCACTTAACACAGGAAGTAAGGCAGAGGCTCTTAGAGTTCTTAAAGAATTAG |
Protein Sequence | MKMGNLIFTCSSSSKENTSARIRDSSTWSPQTGQHISIQTFRELNPAPTSSPISTRTEIPLNGGNSRSTADLQGEDNNQPMTLTRQHLTQEVRQRLLEFLKN |
1 |
Singh AK, et al. Plant Dis. 2021 Sep;105(9):2595-2600. doi: 10.1094/PDIS-12-20-2655-RE. Epub 2021 Oct 28. PMID: 33393356 |
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2 |
Venkataravanappa V, et al. 3 Biotech. 2017 Oct;7(5):331. doi: 10.1007/s13205-017-0970-8. Epub 2017 Sep 18. PMID: 28955628 |
3 |
Jose J, et al. Virology. 2003 Jan 20;305(2):310-7. doi: 10.1006/viro.2002.1768. PMID: 12573576 |
4 |
Tsai WS, et al. Plant Dis. 2013 Feb;97(2):291. doi: 10.1094/PDIS-09-12-0847-PDN. PMID: 30722339 |
5 |
Venkataravanappa V, et al. Acta Virol. 2015 Jun;59(2):125-39. doi: 10.4149/av_2015_02_125. PMID: 26104329 |
6 |
Venkataravanappa V, et al. 3 Biotech. 2013 Dec;3(6):461-470. doi: 10.1007/s13205-012-0107-z. Epub 2012 Dec 20. PMID: 28324417 |
7 |
Chandran SA, et al. Virus Genes. 2014 Feb;48(1):203-7. doi: 10.1007/s11262-013-0992-1. PMID: 24122068 |
8 |
Jeyaseelan TC, et al. Mol Biol Rep. 2021 Feb;48(2):1383-1391. doi: 10.1007/s11033-021-06213-3. Epub 2021 Feb 18. PMID: 33599950 |
9 |
Kumar RV, et al. Virus Genes. 2017 Apr;53(2):275-285. doi: 10.1007/s11262-016-1414-y. Epub 2016 Nov 28. PMID: 27891562 |
10 |
Jeyabharathy C, et al. Virus Res. 2015 Jan 2;195:73-8. doi: 10.1016/j.virusres.2014.08.009. Epub 2014 Aug 27. PMID: 25169741 |