Bhendi yellow vein mosaic virus
Basic Information
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTAAGTGGTGGGTCCAGAACGCACGACGATGCAGACTCAAAGCTTAGATAACGCTCCTTCGGCTATAAGTACGTGCGCACTAAGTTTCAATTCAAAAAATGTGGGATCCACTATTAAACGAATTTCCGGATACGGTTCACGGGTTTCGTTGTATGCTATCTCTAAAATATTTGCAACTTTTGTCGCAGGATTATTCTCCAGATACGCTTGGGTACGAGTTAATACGGGATTTAATTTGTATTTTACGTTCCCGTAATTATGTCGAAGCGAGCTGCCGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAACAACAGGCATGGACAAACAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAGGGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAGTCTCGACACGATGTCGTTCATATTGGTAAGGTAATGTGTATTTCGGATGTTACGCGTGGAGTCGGTTTGACCCATCGTATAGGTAAGCGTTTTTGTGTCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAACATCAAGACGAAGAACCATACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGACGACCGGTAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAATGAGCCCAGTACGGCGACCGTGAAGAACATGCATAGGGATCGTTACCAGGTGTTGAGGAAATGGCATGCAACCGTTACTGGTGGTCAATATGCAGCGAGGGAACAGGCGTTGGTTAAGAAATTTGTCAGGGTTAACAATTATGTTGTTTACAACCAGCAGGAGGCAGGAAAATACGAGAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCAGTGTATGCTACGCTTAAGATTCGGATTTATTTTTATGACTCTGTAACGAATTGAATTAATAAAGTTTGAATTTTATATCTGAATATTGGTCTACATACATTGTCTGATTAACTACATTGTACAATACATGTTCGACGGCTTTAATAACTAAATTAAGTGAGATTACACCTAGATTATTGAGATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGGAAGGTTAGAAAACACTTGTGTATTCCCAGAGCTTTCCGTAGGTTGTAGTTGAAATGGATCCTGAGTGTTATTATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGTTGAGGATCTTGAAATAGAGGGGATTTGGAACCTTCCAGATATAGACGCCATTCTTTGCTTGAGCTGCAGTGATGCGTTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTTGATGCTAAGATAATAACTGCATCCGCATTCAAGGTCCACTCGTCTCCTCCTGTGCACTCGCTTCGCTTCCTTGTGTTGAACTTTGATTGGTACCCGAGTACAACGGTTGGGTGAGAAAGACGAATGCTGCATTTTTTAAAGCCCACGCTTTCAAAGCTGAGTTCTTTTCCTCGTCTAAAAACTCTTTATAGCTTGCGTTGGGGCCTGGATTGCAGAGGAAGATTGTTGGAATGCCTCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGTTTCAGATAATGCGGGTCAACATCATCTATAATGTTGAACCACGCATCGTTTGAATACACTTTAGGGCTTAGATCCAAGTGCCCACATAAATAATTATGTGGCCCCAAGGAACGGGCCCATTGTGTTTTCCCAGTTCTAGACTCCCCCTCTAGAACTAAACTCAAAGGTCTCTGAGGCCGCGCAGCGGCGTCCATGACGTTCTCCGACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCAAAAGAAGAAGATAAAAATGGACAAACATAAACCTCCTGAGGAGGAGTAAAAATCCTATCTAAATTTGAATTTAAATTATGATATTGTAAGACATAATCTTTGGGGGCTAATTCTTTAAGAACTCTAAGAGCCTCTGCCTTACTTCCTGTGTTAAGTGCTGCCGCGTAAGCGTCATTGGCTGATTGTTGTCCTCCCCTTGCAGATCTGCCGTCGATCTGGAATTCCCCCCATTCAAGGGTATCTCCGTCCTTGTCGATATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGTTTGTGGCGACCAAGTCGAAGAATCTCTGATTCTGGCACTTGTATTTTCCTTCGAACTGGATGAGCACGTGAAGATGAGGTTCCCCATTTTCATGAAGCTCACTGCAGATCTTTATGTATTTTTTATTTGTTGGGGTTTGTATATTTTGTAGTTGGGATAATGCCTCTTCTTTATTAAGAGAGCATTGTGGATAAGTAAGGAAATAATTTTTGGAATTGATGACAAAACGCCTTGGAGGCATGTTGACTATTTTTGAGACCCGATTGACCGCTCTTACAACTCTCCCCAGTATATCGGGTCCCTATATATAGTGAGACCCAAATGGCATAATTGTAATAAAACAACTTTAATTTGAAATTCAAACGAAAAGGCTAAAGCGGCCATCCGTATAATATT
Gene Information
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NCBI Accession
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NP_579971.1
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Location
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120-485 |
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Gene Name
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AV2 |
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Protein Name
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precoat protein AV2 |
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Coding Region
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ATGTGGGATCCACTATTAAACGAATTTCCGGATACGGTTCACGGGTTTCGTTGTATGCTATCTCTAAAATATTTGCAACTTTTGTCGCAGGATTATTCTCCAGATACGCTTGGGTACGAGTTAATACGGGATTTAATTTGTATTTTACGTTCCCGTAATTATGTCGAAGCGAGCTGCCGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAACAACAGGCATGGACAAACAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAGGGGATGTGA |
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Protein Sequence
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MWDPLLNEFPDTVHGFRCMLSLKYLQLLSQDYSPDTLGYELIRDLICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQETQNVPDVQKSGCSKGM |
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NCBI Accession
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NP_579972.1
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Location
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280-1050 |
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Gene Name
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AV1 |
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Protein Name
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coat protein AV1 |
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Coding Region
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ATGTCGAAGCGAGCTGCCGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAACAACAGGCATGGACAAACAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAGGGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAGTCTCGACACGATGTCGTTCATATTGGTAAGGTAATGTGTATTTCGGATGTTACGCGTGGAGTCGGTTTGACCCATCGTATAGGTAAGCGTTTTTGTGTCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAACATCAAGACGAAGAACCATACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGACGACCGGTAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAATGAGCCCAGTACGGCGACCGTGAAGAACATGCATAGGGATCGTTACCAGGTGTTGAGGAAATGGCATGCAACCGTTACTGGTGGTCAATATGCAGCGAGGGAACAGGCGTTGGTTAAGAAATTTGTCAGGGTTAACAATTATGTTGTTTACAACCAGCAGGAGGCAGGAAAATACGAGAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCAGTGTATGCTACGCTTAAGATTCGGATTTATTTTTATGACTCTGTAACGAATTGA |
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Protein Sequence
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MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWTNRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHRIGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYAAREQALVKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
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NCBI Accession
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NP_579973.1
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Location
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628-984 |
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Gene Name
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AC5 |
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Protein Name
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AC5 protein |
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Coding Region
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ATGGGTACAAGCCATATAAAGCATCAATGCATTCTCGGTGTGATTCTCGTATTTTCCTGCCTCCTGCTGGTTGTAAACAACATAATTGTTAACCCTGACAAATTTCTTAACCAACGCCTGTTCCCTCGCTGCATATTGACCACCAGTAACGGTTGCATGCCATTTCCTCAACACCTGGTAACGATCCCTATGCATGTTCTTCACGGTCGCCGTACTGGGCTCATTATCAAACATATTAAATACTTCACCAAAATCTTGTGGTTTATCTACCGGTCGTCGATCACGAACAAGGAAAAACATCACCGAATTCGTATGGTTCTTCGTCTTGATGTTCTCGTCCATCCATATCTTACCTAA |
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Protein Sequence
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MGTSHIKHQCILGVILVFSCLLLVVNNIIVNPDKFLNQRLFPRCILTTSNGCMPFPQHLVTIPMHVLHGRRTGLIIKHIKYFTKILWFIYRSSITNKEKHHRIRMVLRLDVLVHPYLT |
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NCBI Accession
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NP_579974.1
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Location
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1052-1456 |
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Gene Name
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AC3 |
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Protein Name
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replication enhancer protein AC3 |
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Coding Region
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ATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCAAGCAAAGAATGGCGTCTATATCTGGAAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAACCACGACAACCGTCCATTCACGACGAACATGGACATAATAACACTCAGGATCCATTTCAACTACAACCTACGGAAAGCTCTGGGAATACACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAATAATCTAGGTGTAATCTCACTTAATTTAGTTATTAAAGCCGTCGAACATGTATTGTACAATGTAGTTAATCAGACAATGTATGTAGACCAATATTCAGATATAAAATTCAAACTTTATTAA |
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Protein Sequence
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MDSRTGERITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDIITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNLVIKAVEHVLYNVVNQTMYVDQYSDIKFKLY |
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NCBI Accession
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NP_579975.1
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Location
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1170-1601 |
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Gene Name
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AC2 |
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Protein Name
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transcriptional activator protein AC2 |
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Coding Region
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ATGCAGCATTCGTCTTTCTCACCCAACCGTTGTACTCGGGTACCAATCAAAGTTCAACACAAGGAAGCGAAGCGAGTGCACAGGAGGAGACGAGTGGACCTTGAATGCGGATGCAGTTATTATCTTAGCATCAACTGCCACAACCATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCAAGCAAAGAATGGCGTCTATATCTGGAAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAACCACGACAACCGTCCATTCACGACGAACATGGACATAATAACACTCAGGATCCATTTCAACTACAACCTACGGAAAGCTCTGGGAATACACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAATAA |
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Protein Sequence
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MQHSSFSPNRCTRVPIKVQHKEAKRVHRRRRVDLECGCSYYLSINCHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQPTESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQ |
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NCBI Accession
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NP_579976.1
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Location
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1498-2586 |
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Gene Name
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AC1 |
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Protein Name
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replicase AC1 |
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Coding Region
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ATGCCTCCAAGGCGTTTTGTCATCAATTCCAAAAATTATTTCCTTACTTATCCACAATGCTCTCTTAATAAAGAAGAGGCATTATCCCAACTACAAAATATACAAACCCCAACAAATAAAAAATACATAAAGATCTGCAGTGAGCTTCATGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGAAAATACAAGTGCCAGAATCAGAGATTCTTCGACTTGGTCGCCACAAACAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGATACCCTTGAATGGGGGGAATTCCAGATCGACGGCAGATCTGCAAGGGGAGGACAACAATCAGCCAATGACGCTTACGCGGCAGCACTTAACACAGGAAGTAAGGCAGAGGCTCTTAGAGTTCTTAAAGAATTAGCCCCCAAAGATTATGTCTTACAATATCATAATTTAAATTCAAATTTAGATAGGATTTTTACTCCTCCTCAGGAGGTTTATGTTTGTCCATTTTTATCTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTCGGAGAACGTCATGGACGCCGCTGCGCGGCCTCAGAGACCTTTGAGTTTAGTTCTAGAGGGGGAGTCTAGAACTGGGAAAACACAATGGGCCCGTTCCTTGGGGCCACATAATTATTTATGTGGGCACTTGGATCTAAGCCCTAAAGTGTATTCAAACGATGCGTGGTTCAACATTATAGATGATGTTGACCCGCATTATCTGAAACACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGAGGCATTCCAACAATCTTCCTCTGCAATCCAGGCCCCAACGCAAGCTATAAAGAGTTTTTAGACGAGGAAAAGAACTCAGCTTTGAAAGCGTGGGCTTTAAAAAATGCAGCATTCGTCTTTCTCACCCAACCGTTGTACTCGGGTACCAATCAAAGTTCAACACAAGGAAGCGAAGCGAGTGCACAGGAGGAGACGAGTGGACCTTGA |
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Protein Sequence
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MPPRRFVINSKNYFLTYPQCSLNKEEALSQLQNIQTPTNKKYIKICSELHENGEPHLHVLIQFEGKYKCQNQRFFDLVATNRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKAEALRVLKELAPKDYVLQYHNLNSNLDRIFTPPQEVYVCPFLSSSFDQVPEELEEWASENVMDAAARPQRPLSLVLEGESRTGKTQWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTQPLYSGTNQSSTQGSEASAQEETSGP |
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NCBI Accession
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NP_579977.1
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Location
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2130-2438 |
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Gene Name
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AC4 |
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Protein Name
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AC4 protein |
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Coding Region
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ATGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGAAAATACAAGTGCCAGAATCAGAGATTCTTCGACTTGGTCGCCACAAACAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGATACCCTTGAATGGGGGGAATTCCAGATCGACGGCAGATCTGCAAGGGGAGGACAACAATCAGCCAATGACGCTTACGCGGCAGCACTTAACACAGGAAGTAAGGCAGAGGCTCTTAGAGTTCTTAAAGAATTAG |
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Protein Sequence
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MKMGNLIFTCSSSSKENTSARIRDSSTWSPQTGQHISIQTFRELNPAPTSSPISTRTEIPLNGGNSRSTADLQGEDNNQPMTLTRQHLTQEVRQRLLEFLKN |