Genus | Begomovirus |
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NCBI Assembly | GCF_002005645.1 |
Isolate | Burkina Faso |
Release date | 2017/2/23 |
Submitter | Ouattara,A., Tiendrebeogo,F., Lefeuvre,P., Claverie,S., Hoareau,M., Traore,E.V., Barro,N., Traore,O., Lett,J.M., Lett,J.-M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009345713.1 |
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Location | 139-489 |
Protein Name | movement protein |
Coding Region | ATGTGGGATCCACTTTTGAATGAGTTCCCCGATTCTGTTCACGGATTTCGTTGTATGCTAGCTATCAAATATTTGCAGGCCGTCGAGGAAACGTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTGATCTCTGTCGTTAGGGCTCGAGATTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGCCCCAGGCACAAACAGGCGTCGATCATGGACTTACCGCCCCATGTATCGAAAGCCTCGGATGTACAGAATGTTCAGAAGTCCTGA |
Protein Sequence | MWDPLLNEFPDSVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDLISVVRARDYVEATRRYNHFHARLEGSSKAELRQPIQQPCCCPHCPRHKQASIMDLPPHVSKASDVQNVQKS |
NCBI Accession | YP_009345714.1 |
---|---|
Location | 299-1075 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGCCCCAGGCACAAACAGGCGTCGATCATGGACTTACCGCCCCATGTATCGAAAGCCTCGGATGTACAGAATGTTCAGAAGTCCTGATGTTCCTCGTGGTTGCGAGGGCCCTTGTAAGGTTCAGTCGTATGAGCAGAGGGATGATGTTAAGCACACTGGTATCGTTCGTTGCGTTAGTGATGTCACACGTGGTTCTGGTATTACTCATCGTGTCGGAAAAAGATTTTGTATTAAATCGATATATGTTCTTGGAAAGGTCTGGATGGATGAAAATATTAAGAAGCAGAATCATACTAATCAGGTTATGTTCTTTTTAGTTCGTGATAGACGTCCCTATGGGAATAGCCCGATGGATTTTGGTCAGGTTTTTAATATGTTCGATAATGAGCCCAGTACTGCTACTGTGAAGAATGATTTGCGTGACAGATATCAAGTCTTGAGGAAATTTCATGCTACTGTGATAGGTGGACCCTCGGGCATGAAAGAGCAGGCTTTAGTTAAGAGATTTTTTAGGGTTAACACTCATGTTGTTTACAATCACCAGGAAGCAGCAAAATACGAGAATCATACGGAGAACGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCAACATTGAAGATACGCATCTATTTTTATGATGCTGTTACTAATTAA |
Protein Sequence | MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAVVPIAPGTNRRRSWTYRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITHRVGKRFCIKSIYVLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDNEPSTATVKNDLRDRYQVLRKFHATVIGGPSGMKEQALVKRFFRVNTHVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN |
NCBI Accession | YP_009345715.1 |
---|---|
Location | 1072-1476 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCTCATCAAGCAAAGAATGGCGTGTTTATCTCGGAGATAAACAATCCCCTATATTTCACGATAACAAGACACGACATCAGGCCATTCAACATGAACCAGGACATCATCACATTACAGATACGGTTCAATCACAACCTCAGGAGGGCACTGGGGATTCACAAATGTTTTCTCAACTTCAAAGTCTGGACGACCTTACGGCCTCAGACTGGTCTTTTCTTAAGGGTCTTTAAATTCCAAGTTCTCAAGCATCTGAAGCATTTAGAAGTAATTTCAATTAATAATGTAATTAGAGCAGTTGATCATGTATTATATAACGTACTTGTAAACACAATTTCCGTTACGGAAAATCATGAAATAAAATTCAATATTTATTAA |
Protein Sequence | MDSRTGEPITAHQAKNGVFISEINNPLYFTITRHDIRPFNMNQDIITLQIRFNHNLRRALGIHKCFLNFKVWTTLRPQTGLFLRVFKFQVLKHLKHLEVISINNVIRAVDHVLYNVLVNTISVTENHEIKFNIY |
NCBI Accession | YP_009345716.1 |
---|---|
Location | 1217-1624 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCGATCTTCGTCACCATCGACAACCCATTGTTCACAGGTACCAATCAAAGTACAACACAGAGCGGCCAAGAAGAAAGCAGTGAGACGTAAACGAGTAGACCTAGACTGCGGCTGTTCATACTACCTCCACATCGACTGCATCAACCATGGATTCACGCACAGGGGAACCCATCACTGCTCATCAAGCAAAGAATGGCGTGTTTATCTCGGAGATAAACAATCCCCTATATTTCACGATAACAAGACACGACATCAGGCCATTCAACATGAACCAGGACATCATCACATTACAGATACGGTTCAATCACAACCTCAGGAGGGCACTGGGGATTCACAAATGTTTTCTCAACTTCAAAGTCTGGACGACCTTACGGCCTCAGACTGGTCTTTTCTTAAGGGTCTTTAA |
Protein Sequence | MRSSSPSTTHCSQVPIKVQHRAAKKKAVRRKRVDLDCGCSYYLHIDCINHGFTHRGTHHCSSSKEWRVYLGDKQSPIFHDNKTRHQAIQHEPGHHHITDTVQSQPQEGTGDSQMFSQLQSLDDLTASDWSFLKGL |
NCBI Accession | YP_009345717.1 |
---|---|
Location | 1533-2612 |
Protein Name | replication associated protein |
Coding Region | ATGGCTCCTCCAAAGCGTTTTAGAGTTAATTCCAAAAATTATTTCCTTACTTTCCCAAAATGTTCTCTAACCAAAGACGAAGCCCTCGAACAACTACTTAAACTCCAAACCCCAACAAATAAAAAATACATTAAAATCTGCAGAGAGTTGCACGAAGATGGCGAACCTCATTTACATGTGCTTCTGCAGTTCGAAGGAAAATTCAACTGCCAAAATCAGAGATTCTTCGACCTCGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGCGATACACTCGAATGGGGAGAATTCCAGATCGACGGACGATCTGCAAGGGGCGGGCAGCAATCAGCCAACGACGCTTACGCAAAAGCACTTAACGCAGGAAGTAAGCCGGCGGCTCTTAATGTAATAAGGGAATTAGCCCCTAAAGATTTTATTTTACAATTTCATAATTTAAATAATAATTTAGATAGGATTTTTGAAGAGCCTCCGGCTCCTTATATTTCTCCTTTTTCTTCTTCTTCTTTCGATCAAGTTCCGGAGGAACTTGAGACATGGGTTTCTGAGAACGTCATGCCTTCCGCTGCGCGGCCCTGGAGGCCCAACAGTATTGTCATTGAGGGAGAAAGCCGGACCGGGAAGACCATATGGGCCCGTTCTCTAGGCCCACATAACTACTTATGTGGACACCTTGACCTAAGCCCAAAGGTCTACAGCAACGATGCGTGGTACAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTCAAGGAATTTATGGGTGCCCAACGAGACTGGCAAAGCAACACAAAGTACGGGAAACCAATCCAAATTAAAGGCGGGATTCCCACAATCTTTCTATGCAATCCAGGGCCAACATCCTCATATAAAGAATATCTCGACGAGGAAAAAAACGCAGCACTAAGAGCCTGGGCTATTAAAAATGCGATCTTCGTCACCATCGACAACCCATTGTTCACAGGTACCAATCAAAGTACAACACAGAGCGGCCAAGAAGAAAGCAGTGAGACGTAA |
Protein Sequence | MAPPKRFRVNSKNYFLTFPKCSLTKDEALEQLLKLQTPTNKKYIKICRELHEDGEPHLHVLLQFEGKFNCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNAGSKPAALNVIRELAPKDFILQFHNLNNNLDRIFEEPPAPYISPFSSSSFDQVPEELETWVSENVMPSAARPWRPNSIVIEGESRTGKTIWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAALRAWAIKNAIFVTIDNPLFTGTNQSTTQSGQEESSET |
NCBI Accession | YP_009345718.1 |
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Location | 2165-2455 |
Protein Name | C4 protein |
Coding Region | ATGGCGAACCTCATTTACATGTGCTTCTGCAGTTCGAAGGAAAATTCAACTGCCAAAATCAGAGATTCTTCGACCTCGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGCGATACACTCGAATGGGGAGAATTCCAGATCGACGGACGATCTGCAAGGGGCGGGCAGCAATCAGCCAACGACGCTTACGCAAAAGCACTTAACGCAGGAAGTAAGCCGGCGGCTCTTAATGTAA |
Protein Sequence | MANLIYMCFCSSKENSTAKIRDSSTSYPQPGQHISIRTFRELNPAPTSSPTSTRTAIHSNGENSRSTDDLQGAGSNQPTTLTQKHLTQEVSRRLLM |
1 |
Ouattara A, et al. Arch Virol. 2017 May;162(5):1427-1429. doi: 10.1007/s00705-017-3231-6. Epub 2017 Feb 4. PMID: 28161765 |
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2 |
Conflon D, et al. Virus Res. 2018 Jul 15;253:124-134. doi: 10.1016/j.virusres.2018.06.003. Epub 2018 Jun 15. PMID: 29908896 |
3 |
Tiendrébéogo F, et al. Virol J. 2010 Feb 23;7:48. doi: 10.1186/1743-422X-7-48. PMID: 20178575 |
4 |
Tiendrébéogo F, et al. Virol J. 2012 Mar 14;9:67. doi: 10.1186/1743-422X-9-67. PMID: 22416906 |