Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_002867655.1 |
Isolate | Brazil: Goias |
Release date | 2018/8/26 |
Submitter | Albuquerque,L.C., Varsani,A., Fernandes,F.R., Pinheiro,B., Martin,D.P., de Tarso Oliveira Ferreira,P., Lemos,T.O., Inoue-Nagata,A.K., Martins,D.P., Ferreira,P.T.O. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009508029.1 |
---|---|
Location | 156-902 |
Protein Name | V1 |
Coding Region | ATGCCAAAGCGAGATGCCCCATGGCGTATAGTGGCAGGGACCACGAAAGTATCCCGCTCTTCTAATTATTCACCTCGGGGAGGTATACCCAAGCGGGATGCTTGGGTAAACAGGCCCATGTACAGGAAGCCCAGGATATATCGTACGTTGAGAGGGCCTGATGTTCCTAAAGGGTGTGAAGGCCCATGTAAAGTTCAATCCTATGAGCAACGTCATGACATTTCTCATCTTGGCAAGGTGATGTGTATCTCTGATGTGACACGTGGTAATGGTATTACACACCGTGTTGGTAAGCGTTTTTGCGTTAAGTCTGTGTACATATTGGGTAAGATATGGATGGACGAAAATATTAAACTGAAGAACCATACCAACAGTGTTATTTTTTGGTTAGTGAGGGATCGTAGACCCTATGGGACACCTATGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCTAGTACTGCTACGGTGAAGAACGATCTTCGTGATCGTTATCAAGTCATTCATCGATTCAATGCTAAGGTTACGGGTGGACAGTATGCTAGCAACGAGCAAGCTCTTGTTCGGCGTTTCTGGAAGGTCAATAATCATGTAGTTTATAATCATCAGGAAGCCAGCGAAGTACGAGAATCCATACCGGAGAATGCTCTGTTATTGTATATGGCATGTACACATGCCTCTAATCCCGTGTATGCTACTTTGAAAATTCGGATCTATTTTTATGATTCGATTTCAAATTAA |
Protein Sequence | MPKRDAPWRIVAGTTKVSRSSNYSPRGGIPKRDAWVNRPMYRKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVIHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEASEVRESIPENALLLYMACTHASNPVYATLKIRIYFYDSISN |
NCBI Accession | YP_009508030.1 |
---|---|
Location | 899-1297 |
Protein Name | C3 |
Coding Region | ATGGATTCACGCACCGCGGAACCCATCACTGTGCCTCAAGCAGAGAATGGCGTCTTTATTTGGGAGATTACAAATCCCCTCTATTTCAAGATAACCAACGTCGAGGACCCCTATTATACAACGACCAGGATATACCATGTGCAGATACGTTTCAACCACAACCTGCGGAAAGCGTTGGGTCTCCACAAGGCATTTCTAAATTTCCAAGTCTGGACGACATCCCTGAGAGCTTCTGGGATGACATATTTAACTAGATTTAGATATTTCGTTTTATTGTATCTGAACCAATTAGGTATTATTTCCATTAACAATGTAATCAGAGCTGTTCGTTTCGCAACAGACAAATCTTATGTAAATTATGTACTCGAAAATCATTCAATAAAATTTAAACTTTATTAA |
Protein Sequence | MDSRTAEPITVPQAENGVFIWEITNPLYFKITNVEDPYYTTTRIYHVQIRFNHNLRKALGLHKAFLNFQVWTTSLRASGMTYLTRFRYFVLLYLNQLGIISINNVIRAVRFATDKSYVNYVLENHSIKFKLY |
NCBI Accession | YP_009508031.1 |
---|---|
Location | 1044-1433 |
Protein Name | C2 |
Coding Region | ATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAGCCACGGCACAGAGCCGCCAAACAGAAAACAACCAGGCGTAAACGCATAGACCTAAACTGCGGCTGCTCCATATACATCCACATCAACTGTAGAAATAATGGATTCACGCACCGCGGAACCCATCACTGTGCCTCAAGCAGAGAATGGCGTCTTTATTTGGGAGATTACAAATCCCCTCTATTTCAAGATAACCAACGTCGAGGACCCCTATTATACAACGACCAGGATATACCATGTGCAGATACGTTTCAACCACAACCTGCGGAAAGCGTTGGGTCTCCACAAGGCATTTCTAAATTTCCAAGTCTGGACGACATCCCTGAGAGCTTCTGGGATGACATATTTAACTAG |
Protein Sequence | MLNSSSSTPPSIKPRHRAAKQKTTRRKRIDLNCGCSIYIHINCRNNGFTHRGTHHCASSREWRLYLGDYKSPLFQDNQRRGPLLYNDQDIPCADTFQPQPAESVGSPQGISKFPSLDDIPESFWDDIFN |
NCBI Accession | YP_009508032.1 |
---|---|
Location | 1354-2430 |
Protein Name | C1 |
Coding Region | ATGCCACCACCAAAGCGTTTCACTGTAAATGCAAAAAATTTCTTCCTTACATACCCTCATTGTTCATTAACCAAAGAGGAAACACTTTCCCAATTACAGACACTTAAAACACCAACAAACAAGAAATTTATTCGTGTAACCAGAGAATTTCACGAAGATGGGGAACCTCATCTCCATGTGCTTATTCAATTCGAAGGCAAATTCAAATGCCAGAATCAACGGTTCTTCGACTTGGTATCCCCAACAAGATCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCGTCCGACGTCAAGACCTACATGGAAAAAGACGGAGACTTCATTGATTTTGGAAATTTCCAGATCGATGGAAGATCAGCAAGAGGAGGCTGCCAAACTGCCAATGACACTTATGCGAAGGTTCTAAACGCAGAAAATCTATCCAAGGCCTTAAATATATTAAAAGAAGAACAACCTAGAGATTATGTTCTTCATTTGGACAAAATACAATCACATGTCCAAAAAATATTTGCAAAGGCTCCAGCCCCATGGGTCCCTATATTTGAATTATCTTCCTTTACTCACGTTCCTGATGAGATGCAGCAATGGGCTGATGAGTATTTCGGAAGGGGTGCCGCTGCGCGGCCGGAAAGACCTATTAGTATCATCATTGAGGGTGATTCTAGGACGGGGAAGACTATGTGGGCTCGTGCACTAGGACCACATAATTATTTAAGTGGACACTTGGATTTTAATTCTAAAGTTTATTCAAATGAAGTGGAGTATAACGTCATTGATGATGTCACTCCGCATTATCTAAAAATGAAGCACTGGAAAGAACTAATTGGGTCCCAGCGTGACTGGCAAAGCAATTGCAAGTACGGAAAGCCGGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTTTGCAATCCAGGAGAGGGGGCTAGTTATAAAGACTTCCTTGACAAACATGAAAATGCATCTCTAAGAGCTTGGACACTGCATAATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAGCCACGGCACAGAGCCGCCAAACAGAAAACAACCAGGCGTAA |
Protein Sequence | MPPPKRFTVNAKNFFLTYPHCSLTKEETLSQLQTLKTPTNKKFIRVTREFHEDGEPHLHVLIQFEGKFKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYMEKDGDFIDFGNFQIDGRSARGGCQTANDTYAKVLNAENLSKALNILKEEQPRDYVLHLDKIQSHVQKIFAKAPAPWVPIFELSSFTHVPDEMQQWADEYFGRGAAARPERPISIIIEGDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNEVEYNVIDDVTPHYLKMKHWKELIGSQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKHENASLRAWTLHNAKFIFLNSPLYQATAQSRQTENNQA |
NCBI Accession | YP_009508033.1 |
---|---|
Location | 2016-2273 |
Protein Name | C4 |
Coding Region | ATGGGGAACCTCATCTCCATGTGCTTATTCAATTCGAAGGCAAATTCAAATGCCAGAATCAACGGTTCTTCGACTTGGTATCCCCAACAAGATCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCGTCCGACGTCAAGACCTACATGGAAAAAGACGGAGACTTCATTGATTTTGGAAATTTCCAGATCGATGGAAGATCAGCAAGAGGAGGCTGCCAAACTGCCAATGACACTTATGCGAAGGTTCTAA |
Protein Sequence | MGNLISMCLFNSKANSNARINGSSTWYPQQDQHISIQTFRELKARPTSRPTWKKTETSLILEISRSMEDQQEEAAKLPMTLMRRF |
1 |
Dos Reis LNA, et al. Virus Genes. 2021 Feb;57(1):127-131. doi: 10.1007/s11262-020-01810-z. Epub 2020 Nov 19. PMID: 33211226 |
---|---|
2 |
Cloned tomato golden mosaic virus back in tomatoes. Wyant PS, et al. Virus Res. 2012 Aug;167(2):397-403. doi: 10.1016/j.virusres.2012.05.021. Epub 2012 Jun 4. PMID: 22677771 |
3 |
Saunders K, et al. J Gen Virol. 2001 Jan;82(Pt 1):45-51. doi: 10.1099/0022-1317-82-1-45. PMID: 11125157 |
4 |
Berger MR, et al. J Gen Virol. 2013 Jun;94(Pt 6):1398-1406. doi: 10.1099/vir.0.050161-0. Epub 2013 Mar 13. PMID: 23486662 |
5 |
González-Pérez E, et al. Viruses. 2024 May 31;16(6):888. doi: 10.3390/v16060888. PMID: 38932180 |
6 |
Determinants of tomato golden mosaic virus symptom development located on DNA B. von Arnim A, et al. Virology. 1992 Jan;186(1):286-93. doi: 10.1016/0042-6822(92)90083-2. PMID: 1727604 |
7 |
Further characterization of tomato-infecting begomoviruses in Brazil. Albuquerque LC, et al. Arch Virol. 2012 Apr;157(4):747-52. doi: 10.1007/s00705-011-1213-7. Epub 2012 Jan 5. PMID: 22218964 |
8 |
Nava A, et al. Arch Virol. 2013 Feb;158(2):399-406. doi: 10.1007/s00705-012-1501-x. Epub 2012 Oct 14. PMID: 23064695 |
9 |
Bornancini VA, et al. Viruses. 2020 Feb 11;12(2):202. doi: 10.3390/v12020202. PMID: 32054104 |
10 |
Shaw J, et al. Nucleus. 2014 Jan-Feb;5(1):85-94. doi: 10.4161/nucl.28315. Epub 2014 Feb 24. PMID: 24637832 |