Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000894215.1 |
Isolate | Argentina |
Release date | 2015/2/22 |
Submitter | Vaghi Medina,C.G., Lopez Lambertini,P.M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_004958246.1 |
---|---|
Location | 143-829 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGTGATGCCCCATGGCGTTTAATGGCGGGGACCACTAAGGTTTCCCGCTCCACCAATTATTCACCTGGTGGGGCTAATTCCAAGCGTGATGCTTGGGTTAATAGGCCCATGTATAGGAAGCCTCGAATATATCGTACGTTGAGAGGGCCTGATGTTCCCAAAGGGTGTGAAGGCCCATGCAAGGTCCAGTCTTATGAACAGCGACATGACATCTCTCATGTTGGCAAGGTCATGTGTATTTCCGATATTACCCGTGGTAATGGTATAACTCACCGTGTTGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATTTTAGGGAAGATATGGATGGATGAGAATATCAAGTTGAAGAACCACACCAACAGCGTCATGTTCTGGTTAGTTAGAGATCGTAGACCGTATGGGACACCTATGGATTTTGGTCAAGTGTTTAATATGTTTGACAATGAGCCTAGCACTGCTACTGTTAAGAACGATCTCCGTGACCGTTATCAAGTTCTACACAAGTTCTACGCTAAGGTGACCGGTGGTCAGTATGCGAGCAACGAGCAAGCTCTCGTGAAGCGTTTCTGGAGGGTTAACAACTATGTGGTCTACAACCATCAGGAAGCTGGCAAATATGAGAATCACACTGAGAACGCTCTGTTTATTGTATATGGCATGTACACATGCCTCTAA |
Protein Sequence | MPKRDAPWRLMAGTTKVSRSTNYSPGGANSKRDAWVNRPMYRKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVLHKFYAKVTGGQYASNEQALVKRFWRVNNYVVYNHQEAGKYENHTENALFIVYGMYTCL |
NCBI Accession | YP_004958247.1 |
---|---|
Location | 884-1282 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTTACGCACCGGGGAATTCATCACTGCGCCTCAAGCAGCGAATGGCGTCTTTATTTGGGAGATTACAAATCCCCTGTATTTCAAGATAATCGACGTGGAGGACCCGTCATACACAACAACCAGGATATACCACGTCCAGATACGGTTCAACCACAGCCTGCGGAGAGCACTGGGTCTCCACAAGGCATTTCTCAATTTCCAAGTCTGGACGACATCAGTGACAGCTTCTGGGATGACATATTTAAGTAGATTCAAATATTTAGTCTTATTGTATGTAAATCAATTAGGTGTAATTTCTCTTAATAATGTAATTAGAGCTGTTCGTTATGCAACAGACAGATATTATGTAAATTATGTACTTGAAAATCATGATATAAAATTCAAACTTTATTAA |
Protein Sequence | MDLRTGEFITAPQAANGVFIWEITNPLYFKIIDVEDPSYTTTRIYHVQIRFNHSLRRALGLHKAFLNFQVWTTSVTASGMTYLSRFKYLVLLYVNQLGVISLNNVIRAVRYATDRYYVNYVLENHDIKFKLY |
NCBI Accession | YP_004958248.1 |
---|---|
Location | 1029-1418 |
Gene Name | AC2 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAAGCACAGCACAGAGCAGCTAAACGGAGAGCAACTAGACGAAGACGCATAGACCTAAACTGTGGCTGCACTATTTACGTACACATCGGTTGCTGCAACCATGGATTTACGCACCGGGGAATTCATCACTGCGCCTCAAGCAGCGAATGGCGTCTTTATTTGGGAGATTACAAATCCCCTGTATTTCAAGATAATCGACGTGGAGGACCCGTCATACACAACAACCAGGATATACCACGTCCAGATACGGTTCAACCACAGCCTGCGGAGAGCACTGGGTCTCCACAAGGCATTTCTCAATTTCCAAGTCTGGACGACATCAGTGACAGCTTCTGGGATGACATATTTAAGTAG |
Protein Sequence | MLNSSSSTPPSIKAQHRAAKRRATRRRRIDLNCGCTIYVHIGCCNHGFTHRGIHHCASSSEWRLYLGDYKSPVFQDNRRGGPVIHNNQDIPRPDTVQPQPAESTGSPQGISQFPSLDDISDSFWDDIFK |
NCBI Accession | YP_004958249.1 |
---|---|
Location | 1360-2418 |
Gene Name | AC1 |
Protein Name | replication associated protein |
Coding Region | ATGCCATCTGCTCCAAAACGCTTTCGCATTTCTTCAAAGAATTACTTCATCACATATCCTCATTGTTCTCTCTCAAAAGAAGAAGCTCTTTCTCAATTACAGAAAATAAATACTCCAACAAACAAGAAATACATTAAAATCTGTAGAGAACTCCATGAAAATGGGGAACCTCATCTCCATGTGCTTATTCAGTTCGAAGGAAAGTTCGTCTGCACGAATCAGCGACTCTTCGACATGGTATCCCCAACAAGATCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCTGACGTCAAGTCCTACATCGACAAGGACGGGGATACTCTCGAATGGGGAGAATTTCAGATCGACGGACGAAGTGCTAGAGGAGGTTGCCAGTCAGCTAATGACGCTGCCGCAGAGGCTCTGAACGCCCCATCTAAAGAAACGGCTATGCAAATAATAAGGGAGAAACTCCCAGAGAAATACTTATTTCAATTTCATAATTTAAATTCTAATTTAGATAGAATTTTCAGTAAGGCTCCGGAGCCGTGGGTTCCTCCGTTTCGACTCTCCTCATTCACTAATGTCCCTGACGAGATGCAAGAATGGGCTGATGCTTATTTTGGTATGGATTCCGCTGCGCGGCCAGAAAGACCTATTAGTATTATCATTGAAGGAGATAGTCGAACAGGGAAGACGATGTGGGCTCGTGCACTAGGCCCACATAATTATTTGAGCGGACATCTTGATTTTAATTCTAAAGTATATTCAAATACTGTTCAATATAACGTCATTGATGATGTCAGTCCGCATTATCTAAAGATGAAACATTGGAAAGAGTTGATTGGGGCCCAAAGGGACTGGCAGTCCAACTGTAAATACGGAAAGCCTGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTGTGCAATCCAGGAGAGGGGGCTAGTTATAAAGACTTCCTAGACAAACAAGAAAATGCATCTCTGAAGGCGTGGACTCTTCATAATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAAGCACAGCACAGAGCAGCTAA |
Protein Sequence | MPSAPKRFRISSKNYFITYPHCSLSKEEALSQLQKINTPTNKKYIKICRELHENGEPHLHVLIQFEGKFVCTNQRLFDMVSPTRSTHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGCQSANDAAAEALNAPSKETAMQIIREKLPEKYLFQFHNLNSNLDRIFSKAPEPWVPPFRLSSFTNVPDEMQEWADAYFGMDSAARPERPISIIIEGDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNTVQYNVIDDVSPHYLKMKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKQENASLKAWTLHNAKFIFLNSPLYQSTAQSS |
NCBI Accession | YP_004958250.1 |
---|---|
Location | 2001-2264 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGAAAATGGGGAACCTCATCTCCATGTGCTTATTCAGTTCGAAGGAAAGTTCGTCTGCACGAATCAGCGACTCTTCGACATGGTATCCCCAACAAGATCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCTGACGTCAAGTCCTACATCGACAAGGACGGGGATACTCTCGAATGGGGAGAATTTCAGATCGACGGACGAAGTGCTAGAGGAGGTTGCCAGTCAGCTAATGACGCTGCCGCAGAGGCTCTGA |
Protein Sequence | MKMGNLISMCLFSSKESSSARISDSSTWYPQQDQHISIRTFRELNHRLTSSPTSTRTGILSNGENFRSTDEVLEEVASQLMTLPQRL |
NCBI Accession | YP_004958251.1 |
---|---|
Location | 368-1138 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTATCCTTTAAAGTACAGACGTGGCTGGTCGTCTAGTCAACGACGAGGGTATTTACGTCAGTCTATGTTTAAACGATCTAACTACGTGAAACGTGCAGATGGGAAACGTCGTCCGCAGAATTCTAATCAGACTACCGATGACATTAGAATGTCACAACAACGTATACATGAGAATCAGTTTGGCCCAGAATTTGTGATTGGTCAGAATTCTGCTATTTCCACCTTCATCACTTATCCTTCTCTTGGTAAGAATGAACCCAGTCGCTCTAAGTCATATATTAAGTTGAAACGTTTGCGTTTCAAAGGTACAGTGAAGGTTGAGCGTTTGCATGCGGAGGTGATCATGGATGGTATAACTCCAAAAATTGAAGGAGTATTTTCTATGGTCGTCGTGGTTGATCGCAAACCACATTTAAGTTCATCAGGATGTTTGCATACATTTGATGAGTTATTTGGTGCACGTATTCACAGTCATGGCAATTTAGCCATAAGTCCTGCTTTGAAGGATCGTTTTTACATACGTCATGTTTGGAAGAATGTAATTTCTGTCGAGAAGGACAGTACGATGATTGATCTTGAAGGAACGACAGCACTATCTAATAGGCGTTTTAATTGTTGGGCATCGTTTAGTGATCTTGATCATGATTCATGTAACGGGGTGTATTCTAATATTAGCAAGAACGCCCTCTTAGTTTACTATTGTTGGATGTCGGACGTCACATCTAAGGCGTCTACATTTGTATCATTTGATCTTGATTATGTTGGTTGA |
Protein Sequence | MYPLKYRRGWSSSQRRGYLRQSMFKRSNYVKRADGKRRPQNSNQTTDDIRMSQQRIHENQFGPEFVIGQNSAISTFITYPSLGKNEPSRSKSYIKLKRLRFKGTVKVERLHAEVIMDGITPKIEGVFSMVVVVDRKPHLSSSGCLHTFDELFGARIHSHGNLAISPALKDRFYIRHVWKNVISVEKDSTMIDLEGTTALSNRRFNCWASFSDLDHDSCNGVYSNISKNALLVYYCWMSDVTSKASTFVSFDLDYVG |
NCBI Accession | YP_004958252.1 |
---|---|
Location | 1441-2217 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGGATTCTCAACTGGTTAACCCACCTAACGCCTTTAATTACATAGAATCTCGTCGTGATGAATATCAGCTATCTCACGACCATACAGAAATCATATTGCAGTTTCCTTCCACGGCGTCTCAACTTAGCGCAAGACTAAATCGTAGCTGTATGAAGATTGACCACTGTGTCATAGAATATAGGCAGCAGGTACCAATCAACGCAACAGGGTCAGTGATTGTCGAGATTCATGACAAGCGAATGACTGATAATGAGTCATTACAGGCGTCTTGGACATTTCCAATCAGATGCAACATAGACCTCCATTATTTCTCATCATCATTCTTCTCATTAAAAGACCCAATTCCATGGAAACTATATTACAGAGTATGTGACTCGAATGTTCATCAGATGACGCATTTTGCCAAGTTCAAGGGTAAACTGAAGTTATCGACGGCGAAACATTCGGTCGACATACCGTTCAGGGCACCCACCGTAAAGATAATGTCTAAACAGTTTACAGTTAACGATATAGATTTCTCCCACGTCGGCTACGGAAAGTGGGAAAGAAAACTAATAAGATCCGCATCTACTTCTAGGTTTGGGCTTCCAGGCCCAATTGAACTTAGACCCGGAGATTCTTGGGCTTCAAGAAGTACAGTAGGAACGGCCCAATTAGATGCGGATTCAGATATAGGTGAGGCCTCACATCCATATAAGGAGCTTAACAGGTTAGGGACTGACATGCTAGACCCTGGTGAATCGGCCTCAATAATTGACGGACTCAATCAAATATAA |
Protein Sequence | MDSQLVNPPNAFNYIESRRDEYQLSHDHTEIILQFPSTASQLSARLNRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVCDSNVHQMTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIMSKQFTVNDIDFSHVGYGKWERKLIRSASTSRFGLPGPIELRPGDSWASRSTVGTAQLDADSDIGEASHPYKELNRLGTDMLDPGESASIIDGLNQI |
1 |
Top 10 plant viruses in molecular plant pathology. Scholthof KB, et al. Mol Plant Pathol. 2011 Dec;12(9):938-54. doi: 10.1111/j.1364-3703.2011.00752.x. Epub 2011 Oct 21. PMID: 22017770 |
---|---|
2 |
Tomato dwarf leaf virus, a New World begomovirus infecting tomato in Argentina. Vaghi Medina CG, et al. Arch Virol. 2012 Oct;157(10):1975-80. doi: 10.1007/s00705-012-1355-2. Epub 2012 Jun 21. PMID: 22718220 |
3 |
Tomato Yellow Leaf Curl Virus Infection in a Monocotyledonous Weed (Eleusine indica). Kil EJ, et al. Plant Pathol J. 2021 Dec;37(6):641-651. doi: 10.5423/PPJ.FT.11.2021.0162. Epub 2021 Dec 1. PMID: 34897255 |
4 |
McLaughlin A, et al. Plant Dis. 2022 Apr 12. doi: 10.1094/PDIS-09-20-2041-PDN. Online ahead of print. PMID: 35412338 |
5 |
Huang X, et al. Plant Signal Behav. 2022 Dec 31;17(1):2149942. doi: 10.1080/15592324.2022.2149942. PMID: 36453197 |
6 |
First Report of Tomato yellow leaf curl virus in Tomato in Mauritius. Lobin K, et al. Plant Dis. 2010 Oct;94(10):1261. doi: 10.1094/PDIS-01-10-0030. PMID: 30743598 |
7 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
8 |
First report of tomato leaf curl New Delhi virus infecting several cucurbit plants in China. Gu Q, et al. Plant Dis. 2023 Apr 20. doi: 10.1094/PDIS-01-23-0180-PDN. Online ahead of print. PMID: 37081636 |
9 |
Ogawa T, et al. Virus Res. 2008 Nov;137(2):235-44. doi: 10.1016/j.virusres.2008.07.021. Epub 2008 Sep 13. PMID: 18722488 |
10 |
AP2/ERF Transcription Factors Involved in Response to Tomato Yellow Leaf Curly Virus in Tomato. Huang Y, et al. Plant Genome. 2016 Jul;9(2). doi: 10.3835/plantgenome2015.09.0082. PMID: 27898839 |