Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000879555.1 |
Isolate | Brazil |
Release date | 2015/2/22 |
Submitter | Castillo-Urquiza,G.P., Beserra,J.E. Jr., Bruckner,F.P., Lima,A.T., Varsani,A., Alfenas-Zerbini,P., Murilo Zerbini,F., Beserra,J.E.A. Jr., Lima,A.T.M., Zerbini,P.A., Zerbini,F.M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_001960952.1 |
---|---|
Location | 153-908 |
Gene Name | CP |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGCGATGCCCCATGGCCCCACAGGGCACCTTCGACGAAGATTAGCCGTTCAGCTAATTTCTCCCCTCGTTCGGGAACTGGGCCTGGGCCTAGCAAAGCCGCTGAATGGGTGAATAGGCCCATGTACAGGAAGCCCAGGATATACAGAACTATGAGAACGCCCGACGTTCCTAGAGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTACGAGCAACGCCACGATATTTCCCATACTGGGAAGGTGATGTGCATATCAGACGTCACACGTGGCAACGGAATTACCCACCGTGTCGGTAAGCGTTTCTGCGTTAAGTCTGTGTATATTCTAGGAAAGATTTGGATGGACGAGAACATCAAGTTGAAAAACCATACGAACAGTGCTATGTTCTGGTTGGTCAGAGACCGAAGACCATATGGCACCCCTATGGATTTTGGCCAAGTGTTCAACATGTTTGACAACGAGCCCAGCACTGCAACCGTGAAGAACGATCTACGTGATCGTTTCCAGGTTATGCATAAGTTCTATGCCAAGGTCACGGGTGGACAATATGCTAGCAATGAGCAGGCGCTGGTCAAGCGGTTCTGGAGGGTCAACAATCATGTGGTCTACAATCATCAAGAAGCCGGGAAGTATGAGAATCACACGGAGAACGCGCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTATATGCAACTTTAAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAA |
Protein Sequence | MPKRDAPWPHRAPSTKISRSANFSPRSGTGPGPSKAAEWVNRPMYRKPRIYRTMRTPDVPRGCEGPCKVQSYEQRHDISHTGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSAMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWRVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | YP_001960953.1 |
---|---|
Location | 905-1303 |
Gene Name | Ren |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAACGCATCACTGTGCGTCAGGCAGAGAATGGCGTCTATATATGGGAGCTAACAAATCCCCTTTATTTCAAGATGTACCAAGTAGAGGACATCCGGTACACCAGGACCAGAGTGTACCATGTCCAAATAAGGTTCAACCACAACCTGAGGAGAGCACTGGGTCTCCACAAGGCATTTCTCAACTTCCAAGTCTGGACGACATCCCTGACAGCTTCTGGGACGACTTACTTAAATAGATTTAAATATTTAGTAATGTTGTATATTGATCAGTTAGGAGTCATTTCAGTTAATAATGTAATTAGAGCTGTTCGCTTTGCAACAGACAGATCATATGTAAATGCTGTACTTGAAAATCATTCAATAAAATTTAAATTATATTAA |
Protein Sequence | MDSRTGERITVRQAENGVYIWELTNPLYFKMYQVEDIRYTRTRVYHVQIRFNHNLRRALGLHKAFLNFQVWTTSLTASGTTYLNRFKYLVMLYIDQLGVISVNNVIRAVRFATDRSYVNAVLENHSIKFKLY |
NCBI Accession | YP_001960954.1 |
---|---|
Location | 1050-1436 |
Gene Name | Trap |
Protein Name | trans-activating protein |
Coding Region | ATGCTAAATTCATCATCCTCAACTCCCCCCTCTATCAAACTACGGCACAGGATTGCGAAGAGAGCACCTCGACGTAGAAGGATAGACCTAAACTGTGGCTGCTCTTTGTACGTCAACCTCAACTGCAGTAACTATGGATTCACGCACAGGGGAACGCATCACTGTGCGTCAGGCAGAGAATGGCGTCTATATATGGGAGCTAACAAATCCCCTTTATTTCAAGATGTACCAAGTAGAGGACATCCGGTACACCAGGACCAGAGTGTACCATGTCCAAATAAGGTTCAACCACAACCTGAGGAGAGCACTGGGTCTCCACAAGGCATTTCTCAACTTCCAAGTCTGGACGACATCCCTGACAGCTTCTGGGACGACTTACTTAAATAG |
Protein Sequence | MLNSSSSTPPSIKLRHRIAKRAPRRRRIDLNCGCSLYVNLNCSNYGFTHRGTHHCASGREWRLYMGANKSPLFQDVPSRGHPVHQDQSVPCPNKVQPQPEESTGSPQGISQLPSLDDIPDSFWDDLLK |
NCBI Accession | YP_001960955.1 |
---|---|
Location | 1360-2427 |
Gene Name | Rep |
Protein Name | replication-associated protein |
Coding Region | ATGCCACGGAACCCTAATATATTCAGATTAACGGCGAGAAACATATTTCTCACATATCCACAGTGCGATATACCAAAAGATGAAGCTCTTCAAATGCTTCAATCTCTTCCATGGTCAGTCGTCAAACCCACATATATACGAGTCGCCAGAGAGGAACACTCCGACGGATTCCCCCATCTTCACTGTCTTGTCCAACTCTCCGGAAAATCGAATATCAAGGATGTTAGGTTTTTCGACCTCACTCACCCCAGACGGTCTACCGGATTTCACCCAAATGTTCAGGCAGCCAAAGACACCAATGCAGTCAAGAATTACATCACCAAAGAAGGTGATTATTGTGAATCCGGACAGTACAAGGTGTCTGGGGGAACAAAGGCAAATAAAGACGACGTGTACCACAACGCCGTCAATGCATCTTCTCCGGGAGAGGCTCTCGACATTATCAGGGCCGGAGACCCCAAGACTTTCCTCGTCAACTATCACAATGTGAAGGCTAATCTAGAGAGGATCTTCCAAAAAGCTCCGGCACCGTGGGTTCCTCCGTTTCCCCTCTCCTCATTCACTAACGTGCCCGACGAGATGCAAGAATGGGCTGATGATTATTTTGGAAGGGATGCAGCTGCGCGGCCTATCAGACCTATAAGTATTGTCATCGAGGGTAATAGTCGGACGGGGAAGACGATGTGGGCGCGTGCACTTGGCCCACATAACTATCTAAGTGGACACCTGGATTTCAATTCTAGGGTTTACTCAAACGATGTACTGTATAACGTCATTGATGACGTCTCTCCGCATTACTTAAAGTTAAAGCACTGGAAAGAATTGATTGGGGCCCAAATAGATTGGCAATCAAATTGTAAGTACGGAAAGCCAGTTCAAATTAAAGGGGGTATCCCATCAATCGTGCTCTGCAATCCTGGAGAGGGGGCCAGCTATAAAGATTTCCTAGCCAAAGAGGAAAACGCATCTCTCAAGTCGTGGACACTCCATAATGCTAAATTCATCATCCTCAACTCCCCCCTCTATCAAACTACGGCACAGGATTGCGAAGAGAGCACCTCGACGTAG |
Protein Sequence | MPRNPNIFRLTARNIFLTYPQCDIPKDEALQMLQSLPWSVVKPTYIRVAREEHSDGFPHLHCLVQLSGKSNIKDVRFFDLTHPRRSTGFHPNVQAAKDTNAVKNYITKEGDYCESGQYKVSGGTKANKDDVYHNAVNASSPGEALDIIRAGDPKTFLVNYHNVKANLERIFQKAPAPWVPPFPLSSFTNVPDEMQEWADDYFGRDAAARPIRPISIVIEGNSRTGKTMWARALGPHNYLSGHLDFNSRVYSNDVLYNVIDDVSPHYLKLKHWKELIGAQIDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLAKEENASLKSWTLHNAKFIILNSPLYQTTAQDCEESTST |
NCBI Accession | YP_001960956.1 |
---|---|
Location | 1938-2207 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGTTAGGTTTTTCGACCTCACTCACCCCAGACGGTCTACCGGATTTCACCCAAATGTTCAGGCAGCCAAAGACACCAATGCAGTCAAGAATTACATCACCAAAGAAGGTGATTATTGTGAATCCGGACAGTACAAGGTGTCTGGGGGAACAAAGGCAAATAAAGACGACGTGTACCACAACGCCGTCAATGCATCTTCTCCGGGAGAGGCTCTCGACATTATCAGGGCCGGAGACCCCAAGACTTTCCTCGTCAACTATCACAATGTGA |
Protein Sequence | MLGFSTSLTPDGLPDFTQMFRQPKTPMQSRITSPKKVIIVNPDSTRCLGEQRQIKTTCTTTPSMHLLRERLSTLSGPETPRLSSSTITM |
NCBI Accession | YP_001960957.1 |
---|---|
Location | 411-1181 |
Gene Name | NSP |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTATTTCTCTAAAAATAAGCGTAGTTGGGCGTCTACTAATCGACGTCTATCCTCACGATATTTTACCTCTAAAAGGTCAATTAGCTTGTTACGTAATGATGGTAAACGTCGAGTGGATATTTCTAGCAAATTCCAGGAAGAAATTAAGATGTCGTCGCATCGAATACATGAAACACAATATGGGCCTGAATTTGTATTAGGTAATAATTCGGCGATATCCACATTTATTACGTATCCTTGTCTTGGCAAGACAGAGCCCAGTCGTACGAGGTCATATATCAAATTAAAACGCCTGCGTTTTAACGGCACTGTTAAAATTGAACGTGCACATACAGATGTGAATATGAATGGGATACCTCCCAAGATTGATGGAGTATTTACTATTGTCGTTGTTATCGATCGAAAACCGCACTTGACCTCTGCTGGTGGTCTCTATACATTCGACGAGCTGTTTGGTGCTAGGATTCACAGTCATGGAAATTTGGCAATAACTCCATTGTTAAAGGATCGTTTTTACATCCGTCATGTCGTCAAACGTGTGTTGTCCGTGGAGAAGGATACGACTATGATTGATCTTGATGGGACGACAACATTGTCTAATAGGCGCTATAACTGTTGGGCTAATTTTAGGGACCTTGATCATGACTCATGTAATGGTATTTATGCAAATATTTGCAAGAACGCCATATTAGTCTATTATTGTTGGATGTCTGATACAGTGTCCAAGGCATCTACATTTGTGTCATTTGACCTAGATTATGTTGGATAA |
Protein Sequence | MYFSKNKRSWASTNRRLSSRYFTSKRSISLLRNDGKRRVDISSKFQEEIKMSSHRIHETQYGPEFVLGNNSAISTFITYPCLGKTEPSRTRSYIKLKRLRFNGTVKIERAHTDVNMNGIPPKIDGVFTIVVVIDRKPHLTSAGGLYTFDELFGARIHSHGNLAITPLLKDRFYIRHVVKRVLSVEKDTTMIDLDGTTTLSNRRYNCWANFRDLDHDSCNGIYANICKNAILVYYCWMSDTVSKASTFVSFDLDYVG |
NCBI Accession | YP_001960958.1 |
---|---|
Location | 1272-2153 |
Gene Name | MP |
Protein Name | movement protein |
Coding Region | ATGAATTCTCAGTTAGTTGTTCCTCCAAATGCTTTTAATTATGTTGAATCACACCGGGATGAATATCAGCTGTCTCATGACTTGACTGAAATTGTTCTACAATTTCCTTCTACGGCATCTCAAATAAGTGCTAAACTTAGTCGCAGCTGTATGAAAATCGACCATTGTGTCATTGAATACAGACAGCAAGTGCCTATAAATGCAACTGGGTCTGTCATAGTTGAAATTCATGACAAACGAATGACAGACAACGAGTCATTGCAGGCGTCATGGACTTTCCCTCTTAGATGTAACATAGACTTACATTATTTCTCAGCGTCTTTCTTCTCGCTTAAAGACCCCATTCCATGGAAACTATACTACAGGGTTAGCGATACAAACGTACATCAAAGAACACATTTCGCAAAATTCAAGGGCAAGTTAAAACTATCCACAGCTAAACACTCTGTAGATATCCCTTTCCGGGCACCCACAGTGAAGATATTGTCGAAGCAGTTTTCAGACAAGGATATCGACTTTGCTCATGTTGGGTTCGGAAAATGGGAGAGAAAATTAGTCAGATGTGCTTCGACTAACAATTTTGGGCCTTCGGGCCCAATAGAAATTAAGGCTGGAGAATCATGGGCCTCCAGAAGTACAGTTGGTATTAGCAACTCTTGTATGGACTCCGAAAAGAGCAACGATCTCAATCCATATAGGGACCTAAACAGATTGGGCACAACATTTCTCGACCCAGGTGAATCAGCTTCAATCGTTGCGGCACAAAGGACGCAGTCTAACATTACATTGTCGTTAGCCCAGTTAAATGATATTGTTAGGACAACTGTCCAAGAATGTATTAACACCAATTGTACACCTTCGGAACCAAAGTCTTTGAAATAA |
Protein Sequence | MNSQLVVPPNAFNYVESHRDEYQLSHDLTEIVLQFPSTASQISAKLSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPLRCNIDLHYFSASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFSDKDIDFAHVGFGKWERKLVRCASTNNFGPSGPIEIKAGESWASRSTVGISNSCMDSEKSNDLNPYRDLNRLGTTFLDPGESASIVAAQRTQSNITLSLAQLNDIVRTTVQECINTNCTPSEPKSLK |
1 |
First Report of Tomato mosaic virus on Common Sow Thistle in Iran. Hashemi SS, et al. Plant Dis. 2014 Aug;98(8):1164. doi: 10.1094/PDIS-03-14-0220-PDN. PMID: 30708804 |
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2 |
The phylogeographic history of tomato mosaic virus in Eurasia. Xu Y, et al. Virology. 2021 Feb;554:42-47. doi: 10.1016/j.virol.2020.12.009. Epub 2020 Dec 24. PMID: 33360588 |
3 |
Nogueira AM, et al. Viruses. 2023 Oct 11;15(10):2074. doi: 10.3390/v15102074. PMID: 37896851 |
4 |
Tiberini A, et al. Plants (Basel). 2022 Feb 11;11(4):489. doi: 10.3390/plants11040489. PMID: 35214821 |
5 |
Resistance Against Melon Chlorotic Mosaic Virus and Tomato Leaf Curl New Delhi Virus in Melon. Romay G, et al. Plant Dis. 2019 Nov;103(11):2913-2919. doi: 10.1094/PDIS-02-19-0298-RE. Epub 2019 Aug 20. PMID: 31436474 |
6 |
Chanda B, et al. Virol J. 2021 Jan 6;18(1):7. doi: 10.1186/s12985-020-01479-8. PMID: 33407624 |
7 |
Tomato Brown Rugose Fruit Virus: Survival and Disinfection Efficacy on Common Glasshouse Surfaces. Skelton A, et al. Viruses. 2023 Oct 11;15(10):2076. doi: 10.3390/v15102076. PMID: 37896853 |
8 |
Mwaipopo B, et al. Plant Dis. 2018 Nov;102(11):2361-2370. doi: 10.1094/PDIS-01-18-0198-RE. Epub 2018 Sep 19. PMID: 30252625 |
9 |
First Report of Tomato mottle mosaic virus Infection of Pepper in China. Li YY, et al. Plant Dis. 2014 Oct;98(10):1447. doi: 10.1094/PDIS-03-14-0317-PDN. PMID: 30703948 |
10 |
Potato yellow mosaic virus: a synonym of tomato yellow mosaic virus. Morales FJ, et al. Arch Virol. 2001;146(11):2249-53. doi: 10.1007/s007050170035. PMID: 11765926 |