Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000894835.3 |
Isolate | Venezuela |
Release date | 2016/8/8 |
Submitter | Zambrano,K., Geraud-Pouey,F., Chirinos,D., Romay,G., Marys,E., Geraud,F. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_004821540.1 |
---|---|
Location | 442-1212 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTTCTCTGTTAGGTACAGACGTGGAGCCTACCACAGTCAACCACGTGGACAAACACGTCAGCCTATGTTTAAAAGGCAGGCCCATGTTAAACGCAATGATGGCAGGCGTCGAGCGACCCAGAATCTGAAGGCCTCTGATGAGCCCAAGATGACTGCCCAGCGGATTCACGAGAACCAGTACGGTTCGGAGTTTATGATGGCCCACAATACAGCCATATCCACTTTCATCAGCTACCCTGAGTTATGCAAAGCCCAACCGAACCGAACTAGGTCGTACATCAAGTTGAAACGGCTGCGTTTCAAGGGAACTGTGAAGATTGAACGTGTTGCCACTGACGTCAGCATGGATGGTTATGGCCCCAAGACGGAAGGGGTATTCACAATGGTCATAGTTGTTGACCGCAAACCGCATTTGCCTGCGTCTGGGTGCCTGCCAACCTTCGATGAACTCTTCGGTGCAAGAATCCACAGCCATGGTAACTTGGCCGTATCTCCTTCACTGAAAGACCGTTTCTACATACGCCACGTGTTGAAGCGAGTATTGTCCGTGGAGAAGGACAGTCTGATGGTAGACGTGGAAGGATCAACTGCCCTGTCTAATAGGCGTTTTAATTGTTGGTCTAGTTTTAAGGACCTTGATGTTGAGTCACGTAAGGGTGTTTATGACAACATAAGCAAGAACGCCCTGTTAGTTTATTACTGTTGGATGTCTGACACCGTGTCCAAGGCATCGACATTTGTATCGTTTGACCTCGATTATATCGGGTGA |
Protein Sequence | MFSVRYRRGAYHSQPRGQTRQPMFKRQAHVKRNDGRRRATQNLKASDEPKMTAQRIHENQYGSEFMMAHNTAISTFISYPELCKAQPNRTRSYIKLKRLRFKGTVKIERVATDVSMDGYGPKTEGVFTMVIVVDRKPHLPASGCLPTFDELFGARIHSHGNLAVSPSLKDRFYIRHVLKRVLSVEKDSLMVDVEGSTALSNRRFNCWSSFKDLDVESRKGVYDNISKNALLVYYCWMSDTVSKASTFVSFDLDYIG |
NCBI Accession | YP_004821541.1 |
---|---|
Location | 1252-2133 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGGAATCTCAGTTAGTTAATCCTCCCAGTGCTTTCAACTACATTGAGTCCCATCGAGACGAGTATCAGCTTTCCCATGACTTAACTGAGATATTCCTCCAATTTCCATCAACGGCGGCTCAATTGACGGCGAGGCTTAGTCGGAGCTGTATGAAAATCGACCATTGCGTCATCGAATACAGGCAACAGGTACCCATAAACGCCACCGGGACGGTAATTGTGGAGATTCACGACCGGAGACTGACTGACAACGAGTCTTTACAGGCATCGTGGACTTTTCCGATCAGGTGCAACATAGATCTCCACTATTTTTCATCGTCCTTCTTCTCCTTGAAGGACCCGATTCCATGGAAACTCTACTACAGAGTGTGCGACACGAACGTCCAGCAGCAGACCCACTTCACGAAATTCAAGGGGAAGCTGAAACTGTCGACGGCGAAACATTCCGTCGACATCCCGTTCAGAGCACCGACTGTAAAAATCCACTCCAAACAATTCACAGAGAAGGACGTGGATTTCTCACACGTGGACTACGGACGATGGGAAAGGAAGACATTGAGATGCGCGTCCATGTCTCGTGTTGGGCTCAGAGGCCCAATTGAAATTAGGCCTGGTGAATCATGGGCTTCAAGGAGCGCAGTTGGCATTGGCCCATCGGACGCGGACTCCGAGACGGAGAACGAGATCCACCCATACAGAGAGCTGCACAGGCTCGGGTCAAGCGCAATAGATCCGGGTGAGTCTGCATCCATGGTGGGGGCGAGAAGGGCAGAGTCCAACATTACGATGTCGGTGGCCCAATTAAACGAACTAGTAAGGACTACGGTCCAAGAATGTATTAAGAGCAATTGTAGTGGGGCACAGCCCAAGAACTTGAAATAA |
Protein Sequence | MESQLVNPPSAFNYIESHRDEYQLSHDLTEIFLQFPSTAAQLTARLSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDRRLTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVCDTNVQQQTHFTKFKGKLKLSTAKHSVDIPFRAPTVKIHSKQFTEKDVDFSHVDYGRWERKTLRCASMSRVGLRGPIEIRPGESWASRSAVGIGPSDADSETENEIHPYRELHRLGSSAIDPGESASMVGARRAESNITMSVAQLNELVRTTVQECIKSNCSGAQPKNLK |
NCBI Accession | YP_004821542.1 |
---|---|
Location | 192-947 |
Gene Name | AV1 |
Protein Name | capsid protein |
Coding Region | ATGCCTAAGCGCGATCTCCCATGGCGCGCGATGCCCGGTACGTCAAAGGTCACCCGCAATGCGAATTACTCCCCACGCGCACGCATCGGCCCAACAACGAACAGGGCCACGGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGAATATATCGGACGCTAAGGACTCCCGATGTTCCAAGAGGTTGTGAAGGCCCGTGTAAGGTCCAGTCTTATGAACAGCGTCACGATATTGCTCACACTGGTAAGGTGATGTGTATTTCCGATGTGACACGTGGCAATGGTATTACCCACCGTGTTGGTAAGCGTTTCTGTGTTAAGTCCGTATACATATTAGGCAAGGTGTGGATGGATGACAACATCAAGTTGAAGAACCACACTAACAGCGTTATGTTCTGGTTAGTTAGGGACCGGAGACCGTATGGCACTCCTATGGATTTTGGACAGGTATTTAATATGTTTGATAATGAGCCCAGCACTGCCACCGTTAAGAACGATCTCCGTGATCGTTACCAGGTGATGAAGAAGTTCTATGCCAAGGTGACAGGTGGACAGTATGCCAGCAACGAGCAGGCTCTGGTCAAGCGTTTCTGGAAGGTCAACAATTATGTGGTGTACAACCACCAGGAGGCTGGGAAGTATGAGAATCATACGGAGAACGCCCTGTTATTGTATATGGCATGTACCCATGCCTCTAACCCCGTGTATGCAACCCTTAAGATTCGGATCTACTTCTACGATTCGATAATGAATTAA |
Protein Sequence | MPKRDLPWRAMPGTSKVTRNANYSPRARIGPTTNRATEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDIAHTGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMKKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession | YP_004821543.1 |
---|---|
Location | 944-1342 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAATTCATCAATGCGCGTCAAGCAGAGAATGGCGTTTATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATTTCCCAGGTAGAGGACATGCCATACACCAGAACGAGGGTGTACCACCTCCAGATACGGTTCAACCACAACCTCAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAATTTCCAAGTCTGGACGACATCCCTGAAAGCTTCTGGGAAGACTTATTTGTTTAGGTTTAGGCATTTAGTTATGATGTATTTAGATCAGTTAGGCGTAATTTCCCTTAACAATGTAATTAGAGCTGTACGATACGCCACCGACAAGGCGTACGTCAATCATGTACTAGAAAATCATTCAATAAAATTCAAACTTTATTAA |
Protein Sequence | MDSRTGEFINARQAENGVYIWEITNPLYFKISQVEDMPYTRTRVYHLQIRFNHNLRRALHLHKAYLNFQVWTTSLKASGKTYLFRFRHLVMMYLDQLGVISLNNVIRAVRYATDKAYVNHVLENHSIKFKLY |
NCBI Accession | YP_004821544.1 |
---|---|
Location | 1089-1493 |
Gene Name | AC2 |
Protein Name | transactivator protein |
Coding Region | ATGCTGTCTTCATCACACTCGACTCCCCCCTGTATCAAGAAGAGACACAGGCAGGCCAAGAAGAAACAGCCCAAGAGGAGAGCCATCAGGAGACGGCGTCTTGACTGGGGGTGCAATTGCACAGCTTACGTAGACATAAACTGCAGAGATCATGGATTCACGCACAGGGGAATTCATCAATGCGCGTCAAGCAGAGAATGGCGTTTATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATTTCCCAGGTAGAGGACATGCCATACACCAGAACGAGGGTGTACCACCTCCAGATACGGTTCAACCACAACCTCAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAATTTCCAAGTCTGGACGACATCCCTGAAAGCTTCTGGGAAGACTTATTTGTTTAG |
Protein Sequence | MLSSSHSTPPCIKKRHRQAKKKQPKRRAIRRRRLDWGCNCTAYVDINCRDHGFTHRGIHQCASSREWRLYLGDNKSPVFQDFPGRGHAIHQNEGVPPPDTVQPQPQESVASPQSLPEFPSLDDIPESFWEDLFV |
NCBI Accession | YP_004821545.1 |
---|---|
Location | 1390-2490 |
Gene Name | AC1 |
Protein Name | REP protein |
Coding Region | ATGCCACCGCCTAAGAAATTTAGAATTAACTCCAAAAACTATTTCCTCACTTATCCCCAGTGCTCTCTTACTAAAGAAGAAGCACTTTCCCAATTACAAAACCTAAAAACCCCAGTAAACAAGAAGTTCATCAAAATCTGCAGAGAGCTTCACGAGAATGGGGAGCCTCATCTCCACATACTCATCCAGTTCGAGGGGAAGTACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGMTAAATCAAGCTCGGACGTTAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGAGAATTCCAGATCGACGGCAGATCTGCAAGAGGAGGTCAGCAAACAGTCAACGATACATACGCAAAGGCGTTGAATGCTGCCTCTGCCGAGCAAGCTCTGCAAATCATAAAGGAAGAACAACCACAACATTTCTTCCTTCAACACCACAACCTGGTTGCTAACGCAACCAGAATATTCAAGAAGGCTCCGGAACCGTGGGTCCCTCCGTTTCGTCTCTCCTCTTTCACTAACGTTCCGGACGAGATGCAAGAGTGGGCCGATAGTTATTTTGGGCTTGATTCCGCTGCGCGGCCAAATCGTCCAATAAGTCTCATAGTTGAGGGTGATTCAAGAACAGGCAAGACGATGTGGGCTCGTGCCTTAGGCCCACATAATTATCTGAGTGGACACCTGGACTTCAACTCAAAGGTTTACTCGAACGAAGTGGAATATAACGTCATTGATGACGTCTCTCCGCAATACTTAAAGTTGAAGCACTGGAAAGAGCTCCTTGGGGCCCAAAAAGACTGGCAGTCAAATTGCAAGTACGGGAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTCTGCAATCCAGGTGAGGGTGCCAGCTATAAAGATTTCCTGAACAAAGAGGAAAACGCATCCCTCAGGAACTGGACACTCAAGAATGCTGTCTTCATCACACTCGACTCCCCCCTGTATCAAGAAGAGACACAGGCAGGCCAAGAAGAAACAGCCCAAGAGGAGAGCCATCAGGAGACGGCGTCTTGA |
Protein Sequence | MPPPKKFRINSKNYFLTYPQCSLTKEEALSQLQNLKTPVNKKFIKICRELHENGEPHLHILIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGXKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGQQTVNDTYAKALNAASAEQALQIIKEEQPQHFFLQHHNLVANATRIFKKAPEPWVPPFRLSSFTNVPDEMQEWADSYFGLDSAARPNRPISLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNEVEYNVIDDVSPQYLKLKHWKELLGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLNKEENASLRNWTLKNAVFITLDSPLYQEETQAGQEETAQEESHQETAS |
1 |
Martins TP, et al. Arch Virol. 2021 Nov;166(11):3217-3220. doi: 10.1007/s00705-021-05220-w. Epub 2021 Sep 8. PMID: 34498121 |
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2 |
Zambrano K, et al. Arch Virol. 2011 Dec;156(12):2263-6. doi: 10.1007/s00705-011-1093-x. Epub 2011 Aug 19. PMID: 21853328 |
3 |
Spinach latent virus Infecting Tomato in Virginia, United States. Vargas-Asencio J, et al. Plant Dis. 2013 Dec;97(12):1663. doi: 10.1094/PDIS-05-13-0529-PDN. PMID: 30716862 |
4 |
First Report of Tomato mosaic virus on Hibiscus rosa-sinensis in China. Huang JG, et al. Plant Dis. 2004 Jun;88(6):683. doi: 10.1094/PDIS.2004.88.6.683C. PMID: 30812606 |
5 |
Disease complex associated with begomoviruses infecting squash and cucumber in Saudi Arabia. Amer MA, et al. Cell Mol Biol (Noisy-le-grand). 2024 Nov 27;70(11):58-63. doi: 10.14715/cmb/2024.70.11.8. PMID: 39707780 |
6 |
First Report of Parietaria mottle virus on Tomato in Spain. Aramburu J. Plant Dis. 2001 Nov;85(11):1210. doi: 10.1094/PDIS.2001.85.11.1210C. PMID: 30823185 |
7 |
First Report of Tomato severe rugose virus in Chili Pepper in Brazil. Bezerra-Agasie IC, et al. Plant Dis. 2006 Jan;90(1):114. doi: 10.1094/PD-90-0114C. PMID: 30786504 |
8 |
First Report of Tomato spotted wilt virus in Brugmansia suaveolens in Korea. Choi SK, et al. Plant Dis. 2014 Sep;98(9):1283. doi: 10.1094/PDIS-02-14-0173-PDN. PMID: 30699655 |
9 |
First Report of Tomato ringspot virus Infecting Pepper in Iran. Sokhansanj Y, et al. Plant Dis. 2012 Dec;96(12):1828. doi: 10.1094/PDIS-07-12-0664-PDN. PMID: 30727266 |
10 |
First Report of Tomato spotted wilt virus on Gerbera hybrida in Serbia. Stanković I, et al. Plant Dis. 2011 Feb;95(2):226. doi: 10.1094/PDIS-10-10-0704. PMID: 30743419 |