Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_013087485.1 |
Isolate | Brazil |
Release date | 2021/6/1 |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_010086753.1 |
---|---|
Location | 502-1257 |
Gene Name | NSP |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTATTCAAGTAAATACAAACGTGGTGGGTCTTTTAATGTCCGCCGTGGTTCTTTAAGAAATCCCACGTCTAAGCGTTATCTCTCAATGAAACGTCGATCGGGATTAGCGAATAAGTCACAAGAAAATAGTAAGATGACATCTCAACGCATTCACGAGAACCAGTTTGGACCAGAATTTGTGATGGGCCATAATTCAGCTATTTCTTCGTATATAACGTTTCCATCTGTTGGTAAGAGTGAGCCGAACCGGTCCAGGTCATATATCAAGTTAAAACGTCTACGTTTTAAAGGGACTGTAAAGGTAGAACGTGCACATGTCGACGTTAACATGGATGGATCAGCTCAGAAGATCGAGGGCGTATTTTCAATGGTAATCGTGGTCGATCGTAAACCTCATTTGGGTTCTTCAGGGCGCCTTCACACGTTCGATGAATTATTCGGTGCTAGGATTCACAGCCATGGTAACCTGGCGATATCTCCAGGCTTAAAGGACCGTTACTACATACGGCATGTTCATAAACGTGTTTTGTCTGTGGAGAAGGACAGTTTGATGGTTGATATTGAAGGAACGACATCGTTCTCTAACAGGCGTTTTAATTGTTGGTCTAGTTTTAATGACGTTGACCGTGACTCATGTAACGGTGTATACGCCAATATTAACAAGAACGCATTACTAGTATATTACTGTTGGATGTCTGATATTTCATCGAAGGCATCGACTTTTGTATCGTTTGACTTAGATTATGTCGGTTGA |
Protein Sequence | MYSSKYKRGGSFNVRRGSLRNPTSKRYLSMKRRSGLANKSQENSKMTSQRIHENQFGPEFVMGHNSAISSYITFPSVGKSEPNRSRSYIKLKRLRFKGTVKVERAHVDVNMDGSAQKIEGVFSMVIVVDRKPHLGSSGRLHTFDELFGARIHSHGNLAISPGLKDRYYIRHVHKRVLSVEKDSLMVDIEGTTSFSNRRFNCWSSFNDVDRDSCNGVYANINKNALLVYYCWMSDISSKASTFVSFDLDYVG |
NCBI Accession | YP_010086754.1 |
---|---|
Location | 1315-2196 |
Gene Name | MP |
Protein Name | movement protein |
Coding Region | ATGGAATCCCAATTAATGAATCCTCCAAATGCCTTTAATTACATCGAATCTCAGCGTGATGAGTATCAGCTATCTCATGATCTGACAGAGATCATCCTACAATTTCCATCAACGGCGTCTCAAATAAGCGCAAGACTAAGCCGTAGCTGTATGAAGATAGACCATTGCGTCATCGAATTCAGGCAACAGGTTCCGATAAACGCTACGGGGTCAGTCGTCGTGGAGATCCATGACAAGAGAATGACAGACAACGAATCATTGCAGGCGTCATGGACTTTTCCGATTAGATGTAACATAGATCTTCATTATTTCTCATCGTCGTTCTTCTCACTTAAAGATCCTATTCCATGGAAGTTATACTACAGGGTATGCGATACAAATGTTCATCAGAGGACCCACTTTGCCAAATTTAAGGGAAAGCTAAAGTTGTCGACGGCGAAGCACTCTGTCGATATTCCTTTCCGAGCACCTACAGTGAAGATACTGTCTAAACAGTTTACAGAAAAAGACGTCGATTTCTGCCACGTCGGCTACGGGAAATGGGAAAGGAAAACAGTCAGGTCCAATTCGGTTGCCAGATATGGGCTTCACTGCCCAATTGAGCTAAAGCCGGGAGAGTCATGGGCTTCAAGGAGTACGATTGGACCCAACAATTCATATGCGGGATCCGACATCGGAGAGGAAATACATCCTTATCGAGAACTAAATCGGCTGGGAACAACGATATTAGATCCAGGAGAATCCGCCTCAATTGTGGGAGACCAGAGGGCCCAATCCAACATAACGATGTCAATGGCCCAGTTGAACGAGTTAGTTAGAACAACTGTTCAGGAATGTATTAATACCAATTGTACTCCGTCAGAAACGAAGTCTCTCAAATAA |
Protein Sequence | MESQLMNPPNAFNYIESQRDEYQLSHDLTEIILQFPSTASQISARLSRSCMKIDHCVIEFRQQVPINATGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTEKDVDFCHVGYGKWERKTVRSNSVARYGLHCPIELKPGESWASRSTIGPNNSYAGSDIGEEIHPYRELNRLGTTILDPGESASIVGDQRAQSNITMSMAQLNELVRTTVQECINTNCTPSETKSLK |
NCBI Accession | YP_010086755.1 |
---|---|
Location | 193-948 |
Gene Name | CP |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGGGAAGCCCCGTGGCGCCTGATGGCGGGAACAACTAAGGTTAGTCGACCTGCTGGCTATTCCACCCGTTTAGCTCCCGGCCCAAGAATAAACAAGGCCGCAGAATGGGTGAACAGGCCCATGTACAGGAAGCCCAGGATATATAGGGTTTTGAGGACACCTGATGTCCCTAGAGGGTGTGAGGGGCCTTGTAAGGTCCAGTCCTACGAGCAGCGGCATGATATCTCTCATGCCGGGAAGGTGATATGTATATCTGATGTCACACGTGGCAGTGGTATCACCCACCGTGTTGGTAAGCGTTTCTGTGTCAAGTCTGTGTACATTTTAGGCAAGATCTGGATGGACGAGAACATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGAGACAGACGACCGAACGGTACGCCCATGGATTTCGGACATTTATTTAACATGTTCGACAACGAGCCCAGCACCGCTACGGTCAAGAATGATCTCCGTGATCGGTTCCAGGTTTTGCACAGGTTTTATGCCAAGGTCACAGGTGGTCAATACGCCAGCAATGAACAGGCGCTGGTCAAGCGGTTCTGGAAGGTCAACAACCATGTGGTGTACAACAACCAGGAAGCCGCTCGATACGAGAATCATACGGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTTAAGATTCGAATCTATTTCTACGATTCGATAACAAATTAA |
Protein Sequence | MPKREAPWRLMAGTTKVSRPAGYSTRLAPGPRINKAAEWVNRPMYRKPRIYRVLRTPDVPRGCEGPCKVQSYEQRHDISHAGKVICISDVTRGSGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPNGTPMDFGHLFNMFDNEPSTATVKNDLRDRFQVLHRFYAKVTGGQYASNEQALVKRFWKVNNHVVYNNQEAARYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | YP_010086756.1 |
---|---|
Location | 945-1349 |
Gene Name | Ren |
Protein Name | replication enhancer protein |
Coding Region | ATGGTTATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCAGAGAGTGGCGTCTATATCTGGGGGATAACAAATCCCCTGTATTTCAAGATGTACAGAGTAGAAGACATCCCGTACACGACGACCAGAGTATATCACCTCCAGATAAGGTTCAATCACAACCTGAGGAGAGCGTTGCATCTCCACAAGGCATTCCTGAATTTCCAAGTTTGGACGACATCTCTGACAGCTTCTGGGAAGACATATTTAAATAGATTTAGACATTTAGTTTTGCTGTATCTAGACCGATTAGGGGTAATCGCAATTAATAATGTAATTAGAGCTGTTCGTTTTGCAACAGACAAGTCGTATGTCAGTCATGTACTTGAAAATCATTCAATAAAATTCAAAATTTATTAA |
Protein Sequence | MVMDSRTGELITAHQAESGVYIWGITNPLYFKMYRVEDIPYTTTRVYHLQIRFNHNLRRALHLHKAFLNFQVWTTSLTASGKTYLNRFRHLVLLYLDRLGVIAINNVIRAVRFATDKSYVSHVLENHSIKFKIY |
NCBI Accession | YP_010086757.1 |
---|---|
Location | 1090-1479 |
Gene Name | Trap |
Protein Name | trans-activating protein |
Coding Region | ATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAAACCAAACACAGGATTGCGAAGAAGAGAGCCATCCGACGACGGCGGATTGACTTGAACTGCGGGTGCACCATATACGTAAACCTCAATTGCCATGGTTATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCAGAGAGTGGCGTCTATATCTGGGGGATAACAAATCCCCTGTATTTCAAGATGTACAGAGTAGAAGACATCCCGTACACGACGACCAGAGTATATCACCTCCAGATAAGGTTCAATCACAACCTGAGGAGAGCGTTGCATCTCCACAAGGCATTCCTGAATTTCCAAGTTTGGACGACATCTCTGACAGCTTCTGGGAAGACATATTTAAATAG |
Protein Sequence | MLNSSSSTPPSIKTKHRIAKKRAIRRRRIDLNCGCTIYVNLNCHGYGFTHRGTHHCTSGREWRLYLGDNKSPVFQDVQSRRHPVHDDQSISPPDKVQSQPEESVASPQGIPEFPSLDDISDSFWEDIFK |
NCBI Accession | YP_010086758.1 |
---|---|
Location | 1391-2470 |
Gene Name | Rep |
Protein Name | replication-associated protein |
Coding Region | ATGCCACGACAACCTAATACTTTTAGGCTTGCAGCTAAAAACATTTTCTTAACTTATCCCAAGTGCGACATAACCAAAGATGAAGCTCTTCAGATGCTTCAAACCCTTCCATGGTCAGTCGTCAAGCCAACCTATATCAGGGTCGCCAGAGAGGATCACGCAGACGGAAACCCCCATCTCCACTGCCTTGTTCAACTCTCCGGGAAGTCCAACATCAAGGATGCTAGATTTTTCGACCTTACTCACCCCAGACGGTCAACCACTTTTCACCCAAATATTCAGGCAGCCAAAGACACCAATGCCGTCAAGAATTACATCACCAAAGAGGGTGACTATTGTGAATCCGGACAGTACAAGGTTTCTGGGGGAACCAAAGCCAATAAGGACGATGTCTATCACAACGCCGTCCATGCAGGAAGTGTTTCAGAGGCTCTTGACATTATCAAAGCCGGAGATCCAAAATCATACATCGTCCAACACCATAACATCCGCTCTAACCTAGAACGGATATTCAAAAGGGCTCCAGAACCGTGGGTCCCTCCGTTCCCACTCGCATCGTTCACTAACGTTCCAGAAGAGCTGCAAGAATGGGCGGATGATTATTTTGGAAGAGGTGCCGCTGCGCGGCCGGAGAGACCTGTAAGTATCATAGTTGAGGGTGACTCTCGAACAGGGAAGACGATGTGGGCTCGTGCCTTAGGCCCACATAATTATTTAAGTGGACACTTGGACTTCAATTCTAGGGTTTACTCAAACGAAGTTGAGTATAACGTCATCGATGATGTCACCCCGCATTATTTAAAGTTAAAGCATTGGAAGGAGCTGATTGGTGCTCAAAAAGACTGGCAGTCAAATTGTAAGTACGGTAAGCCAGTTCAAATTAAAGGAGGAATCCCAGCAATCGTGCTCTGCAATCCTGGCGAGGGGGCCAGCTATAAAGATTTCCTCGAGAAAGAGGAAAATGCATCACTAAAATCTTGGACGCTACACAATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAAACCAAACACAGGATTGCGAAGAAGAGAGCCATCCGACGACGGCGGATTGA |
Protein Sequence | MPRQPNTFRLAAKNIFLTYPKCDITKDEALQMLQTLPWSVVKPTYIRVAREDHADGNPHLHCLVQLSGKSNIKDARFFDLTHPRRSTTFHPNIQAAKDTNAVKNYITKEGDYCESGQYKVSGGTKANKDDVYHNAVHAGSVSEALDIIKAGDPKSYIVQHHNIRSNLERIFKRAPEPWVPPFPLASFTNVPEELQEWADDYFGRGAAARPERPVSIIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNEVEYNVIDDVTPHYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKDFLEKEENASLKSWTLHNAKFIFLNSPLYQNQTQDCEEESHPTTAD |
NCBI Accession | YP_010086759.1 |
---|---|
Location | 1969-2391 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGAAGCTCTTCAGATGCTTCAAACCCTTCCATGGTCAGTCGTCAAGCCAACCTATATCAGGGTCGCCAGAGAGGATCACGCAGACGGAAACCCCCATCTCCACTGCCTTGTTCAACTCTCCGGGAAGTCCAACATCAAGGATGCTAGATTTTTCGACCTTACTCACCCCAGACGGTCAACCACTTTTCACCCAAATATTCAGGCAGCCAAAGACACCAATGCCGTCAAGAATTACATCACCAAAGAGGGTGACTATTGTGAATCCGGACAGTACAAGGTTTCTGGGGGAACCAAAGCCAATAAGGACGATGTCTATCACAACGCCGTCCATGCAGGAAGTGTTTCAGAGGCTCTTGACATTATCAAAGCCGGAGATCCAAAATCATACATCGTCCAACACCATAACATCCGCTCTAACCTAG |
Protein Sequence | MKLFRCFKPFHGQSSSQPISGSPERITQTETPISTALFNSPGSPTSRMLDFSTLLTPDGQPLFTQIFRQPKTPMPSRITSPKRVTIVNPDSTRFLGEPKPIRTMSITTPSMQEVFQRLLTLSKPEIQNHTSSNTITSALT |
1 |
Tomato Yellow Leaf Curl Virus Infection in a Monocotyledonous Weed (Eleusine indica). Kil EJ, et al. Plant Pathol J. 2021 Dec;37(6):641-651. doi: 10.5423/PPJ.FT.11.2021.0162. Epub 2021 Dec 1. PMID: 34897255 |
---|---|
2 |
Occurrence of Tomato Leaf Curl New Delhi Virus in Cucurbit Plants in China. Zeng R, et al. Plant Dis. 2023 Mar 22. doi: 10.1094/PDIS-01-23-0059-PDN. Online ahead of print. PMID: 36947833 |
3 |
First report of tomato leaf curl New Delhi virus infecting several cucurbit plants in China. Gu Q, et al. Plant Dis. 2023 Apr 20. doi: 10.1094/PDIS-01-23-0180-PDN. Online ahead of print. PMID: 37081636 |
4 |
Resistance Against Melon Chlorotic Mosaic Virus and Tomato Leaf Curl New Delhi Virus in Melon. Romay G, et al. Plant Dis. 2019 Nov;103(11):2913-2919. doi: 10.1094/PDIS-02-19-0298-RE. Epub 2019 Aug 20. PMID: 31436474 |
5 |
First Report of Tomato yellow leaf curl virus Infecting Cowpea in China. Dai FM, et al. Plant Dis. 2011 Mar;95(3):362. doi: 10.1094/PDIS-08-10-0608. PMID: 30743529 |
6 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
7 |
Esmaeili M, et al. Virus Genes. 2015 Dec;51(3):408-16. doi: 10.1007/s11262-015-1250-5. Epub 2015 Oct 3. PMID: 26433951 |
8 |
Nava A, et al. Arch Virol. 2013 Feb;158(2):399-406. doi: 10.1007/s00705-012-1501-x. Epub 2012 Oct 14. PMID: 23064695 |
9 |
Tu YC, et al. Physiol Plant. 2017 Dec;161(4):515-531. doi: 10.1111/ppl.12615. Epub 2017 Oct 6. PMID: 28786123 |
10 |
Tomato yellow leaf curl virus, the intracellular dynamics of a plant DNA virus. Gafni Y. Mol Plant Pathol. 2003 Jan 1;4(1):9-15. doi: 10.1046/j.1364-3703.2003.00147.x. PMID: 20569358 |