Tobacco leaf curl Zimbabwe virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000838925.1 |
| Isolate | Zimbabwe |
| Release date | 2015/2/12 |
| Submitter | Paximadis,M., Rey,M.E., Rey,C. |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_002817
ACCGGATGGCCGCGCCCCGGAAAAGAAGTGGGCCCCACATTTGATAATGATGTGCCGACCAATCATATCGTAGCCTGAAAGGCTAGATATTTGTTCTTTGTCTTTATATACTTGCTCGTCAATTATGGGCCTTGTCCATCATGTGGGATCCTCTATTGAATGAGTTTCCCGAATCTGTTCACGGATTTCGTTGTATGCTGGCCATCAAATATTTGCAGGCCGTTGAGGAAAGTTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTTATTTGTGTTATTAGGGCTCGAGACTATGTCGAAGCGACCAGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGCTGCTGTCCCCATTGTCCAAGGCATAAGCAAACGACGGTCGTGGACTTACCGGCCCAGTTACCGAAAGCCCAGAATGTACCGGATGTACAGAAGTCCTGATGTGCCTCGCGGTTGTGAGGGTCCGTGTAAGATACAGTCATTTGATCAGCGTGATTCCGTTGTTCATACGGGTACTGTTAGGTGTCTTAGCGATGTCACTAGGGGTGGTGGTCTTACGCATCGCACTGGTAAACGCTTTTGTATTAAGTCGATATATGTATTAGGTAAGATCTGGATGGATGAGAACGTGAAGAAGTCTAACCATACTAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGACCTAGTCCCCAGGATTTTGGTCAGGTGTTTAACATGTTTGATAACGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGTTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCTTCAGGATGCAAGGAGGCTGCTATCGTTAAGAGATTTTTCCGTCTGAATCATCATGTGACGTATAACCATCAAGAGGCCGCAAAGTACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGAATGTATTTCTATGATTCAGTATCGAATTAATAAAGTTTGAATTTTATTATATGATATTCGTGTACATCGATTGTTCCATCTAATACATCATACAATACATGTGCTACTGCTCTAATTACATTATTAAGCGTAATGACACCTAAATTATCCAAATACTTTAGGACTTGTGTCCTAAATACTCTTAAGAAATGACCAATCAGAGGCTGTAAGGTCGTCCAGACCTGGAAGTTCAGAAAACATTTGTGAATCCCCAATGCCTTCCTGAGGTTGTAGTTGAATCGTATTTGAAGGTGTATGATGTCGTAATTCTTGAAGAACGGTCTTATGTGGTGTTTGGTTATCTTGAAATAAAGCGGATTTGTTATCTCCCAGGTAAAAACGCCATTCTGAGCTTGATGCGCAGTGATGTCTTCCCCTGTGCGTAAATCCATGATTTCTGCAGCCGATATGTATGTAGTAGGAACACCCGCAGGCTAAATCTATTCGCTTACGGCGAATGGCTTTCGTCTTGGCTTTGCGGTGGAGGACTTTGATTGGTATCTGAGTAGAGTGGCCTGTCGAGGGTGATGAATGTTGCATTCTTGAGCGTCCAGCTTTTGAGTGCGTAATTCTTCGCCTCTTCTAGGAATTCTCTATATGAGGATGTTGGGCCTGGATTGCAGAGGAAGATAGTGGGAATGCCGCCTTTAACTTGAATTGGCTTTCCGTATTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCAAAGAATTCCTTCCAGTGCTTTAGATAATGCGGATCAACATCATCAATGACGTTATACCATGCGTCATTAGAATATACTTTTGGACTTAAGTCTAAATGACCACATAAGTAATTATGTGGCCCTAATGACCTAGCCCAAATAGTTTTGCCGGTACGACTATCGCCTTCTATTACAATACTATTGGGCCTCCAAGGCCGCGCAGCGGCACCACACACATTCTCAGAGACCCACCCTTCAAGTTCCTCAGGGACTTGATCAAAAGAAGAAGAAGAGAAAGGAGAAATATAAGGCTCTGGGGGAGCCTGGAAAATCCTATCTAAATTAGTCTTTAAATTATGATACTGAAAAATAAAATCTTTAGGGAGTTTTTCCCTAATAATAGCCATAGCTGCTTCAGCGGAACCTGCGTTTAAAGCGTCGGCGCATGCGTCGTTAGCATTCTGGCAGCCTCCTCTAGCACTTCGTCCGTCGACCTGGAATTCTCCCCATTCAAGTGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCGGAGCTTGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGGTGATTCTTGCAGTTGAATTTTCCCTCGAACTGAATAAGCACGTGGAGATGAGGTTCCCCATTTTCGTGTAGCTCTCTGCAGATTTTGATGTATTTTTTATTGGTGGGTGTTTCAAGGTTTAATAATTGGGAGAGTGTCTCTTCCTTTGTGAGAGAGCATTTTGGATAAGTGACGAAATAGTTTTTGGAATTTATTTGAAAGCGTTTCGGAGGAGCCATTTGGTCAATGGGTACCGATTGACTCTCAAATTGCATTCTCCTGGTATATCGGTACCCAATATATAGTGGGTACCGAATGGCACAAATGTAATTTGGGGAAAGTAATTTAAAATTCAAATTTTAAACGCTTAAAGCGGCCATCCGATTAATATT
Gene Information
| NCBI Accession | NP_148928.1 |
|---|---|
| Location | 141-491 |
| Gene Name | V1 |
| Protein Name | V1 |
| Coding Region | ATGTGGGATCCTCTATTGAATGAGTTTCCCGAATCTGTTCACGGATTTCGTTGTATGCTGGCCATCAAATATTTGCAGGCCGTTGAGGAAAGTTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTTATTTGTGTTATTAGGGCTCGAGACTATGTCGAAGCGACCAGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGCTGCTGTCCCCATTGTCCAAGGCATAAGCAAACGACGGTCGTGGACTTACCGGCCCAGTTACCGAAAGCCCAGAATGTACCGGATGTACAGAAGTCCTGA |
| Protein Sequence | MWDPLLNEFPESVHGFRCMLAIKYLQAVEESYEPNTLGHDLIRDLICVIRARDYVEATRRYNHFHARLEGSSKAELRQPIYQPCCCPHCPRHKQTTVVDLPAQLPKAQNVPDVQKS |
| NCBI Accession | NP_148929.1 |
|---|---|
| Location | 301-1077 |
| Gene Name | V2 |
| Protein Name | V2 |
| Coding Region | ATGTCGAAGCGACCAGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGCTGCTGTCCCCATTGTCCAAGGCATAAGCAAACGACGGTCGTGGACTTACCGGCCCAGTTACCGAAAGCCCAGAATGTACCGGATGTACAGAAGTCCTGATGTGCCTCGCGGTTGTGAGGGTCCGTGTAAGATACAGTCATTTGATCAGCGTGATTCCGTTGTTCATACGGGTACTGTTAGGTGTCTTAGCGATGTCACTAGGGGTGGTGGTCTTACGCATCGCACTGGTAAACGCTTTTGTATTAAGTCGATATATGTATTAGGTAAGATCTGGATGGATGAGAACGTGAAGAAGTCTAACCATACTAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGACCTAGTCCCCAGGATTTTGGTCAGGTGTTTAACATGTTTGATAACGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGTTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCTTCAGGATGCAAGGAGGCTGCTATCGTTAAGAGATTTTTCCGTCTGAATCATCATGTGACGTATAACCATCAAGAGGCCGCAAAGTACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGAATGTATTTCTATGATTCAGTATCGAATTAA |
| Protein Sequence | MSKRPGDIIISTPVSKVRRRLNFDSPYTNRAAVPIVQGISKRRSWTYRPSYRKPRMYRMYRSPDVPRGCEGPCKIQSFDQRDSVVHTGTVRCLSDVTRGGGLTHRTGKRFCIKSIYVLGKIWMDENVKKSNHTNTCMFWVVRDRRPYGPSPQDFGQVFNMFDNEPSTATVQNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEAAKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSVSN |
| NCBI Accession | NP_148930.1 |
|---|---|
| Location | 1074-1478 |
| Gene Name | C3 |
| Protein Name | C3 |
| Coding Region | ATGGATTTACGCACAGGGGAAGACATCACTGCGCATCAAGCTCAGAATGGCGTTTTTACCTGGGAGATAACAAATCCGCTTTATTTCAAGATAACCAAACACCACATAAGACCGTTCTTCAAGAATTACGACATCATACACCTTCAAATACGATTCAACTACAACCTCAGGAAGGCATTGGGGATTCACAAATGTTTTCTGAACTTCCAGGTCTGGACGACCTTACAGCCTCTGATTGGTCATTTCTTAAGAGTATTTAGGACACAAGTCCTAAAGTATTTGGATAATTTAGGTGTCATTACGCTTAATAATGTAATTAGAGCAGTAGCACATGTATTGTATGATGTATTAGATGGAACAATCGATGTACACGAATATCATATAATAAAATTCAAACTTTATTAA |
| Protein Sequence | MDLRTGEDITAHQAQNGVFTWEITNPLYFKITKHHIRPFFKNYDIIHLQIRFNYNLRKALGIHKCFLNFQVWTTLQPLIGHFLRVFRTQVLKYLDNLGVITLNNVIRAVAHVLYDVLDGTIDVHEYHIIKFKLY |
| NCBI Accession | NP_148931.1 |
|---|---|
| Location | 1219-1626 |
| Gene Name | C2 |
| Protein Name | C2 |
| Coding Region | ATGCAACATTCATCACCCTCGACAGGCCACTCTACTCAGATACCAATCAAAGTCCTCCACCGCAAAGCCAAGACGAAAGCCATTCGCCGTAAGCGAATAGATTTAGCCTGCGGGTGTTCCTACTACATACATATCGGCTGCAGAAATCATGGATTTACGCACAGGGGAAGACATCACTGCGCATCAAGCTCAGAATGGCGTTTTTACCTGGGAGATAACAAATCCGCTTTATTTCAAGATAACCAAACACCACATAAGACCGTTCTTCAAGAATTACGACATCATACACCTTCAAATACGATTCAACTACAACCTCAGGAAGGCATTGGGGATTCACAAATGTTTTCTGAACTTCCAGGTCTGGACGACCTTACAGCCTCTGATTGGTCATTTCTTAAGAGTATTTAG |
| Protein Sequence | MQHSSPSTGHSTQIPIKVLHRKAKTKAIRRKRIDLACGCSYYIHIGCRNHGFTHRGRHHCASSSEWRFYLGDNKSALFQDNQTPHKTVLQELRHHTPSNTIQLQPQEGIGDSQMFSELPGLDDLTASDWSFLKSI |
| NCBI Accession | NP_148932.1 |
|---|---|
| Location | 1535-2614 |
| Gene Name | C1 |
| Protein Name | C1 |
| Coding Region | ATGGCTCCTCCGAAACGCTTTCAAATAAATTCCAAAAACTATTTCGTCACTTATCCAAAATGCTCTCTCACAAAGGAAGAGACACTCTCCCAATTATTAAACCTTGAAACACCCACCAATAAAAAATACATCAAAATCTGCAGAGAGCTACACGAAAATGGGGAACCTCATCTCCACGTGCTTATTCAGTTCGAGGGAAAATTCAACTGCAAGAATCACCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTTGAATGGGGAGAATTCCAGGTCGACGGACGAAGTGCTAGAGGAGGCTGCCAGAATGCTAACGACGCATGCGCCGACGCTTTAAACGCAGGTTCCGCTGAAGCAGCTATGGCTATTATTAGGGAAAAACTCCCTAAAGATTTTATTTTTCAGTATCATAATTTAAAGACTAATTTAGATAGGATTTTCCAGGCTCCCCCAGAGCCTTATATTTCTCCTTTCTCTTCTTCTTCTTTTGATCAAGTCCCTGAGGAACTTGAAGGGTGGGTCTCTGAGAATGTGTGTGGTGCCGCTGCGCGGCCTTGGAGGCCCAATAGTATTGTAATAGAAGGCGATAGTCGTACCGGCAAAACTATTTGGGCTAGGTCATTAGGGCCACATAATTACTTATGTGGTCATTTAGACTTAAGTCCAAAAGTATATTCTAATGACGCATGGTATAACGTCATTGATGATGTTGATCCGCATTATCTAAAGCACTGGAAGGAATTCTTTGGGGCCCAAAGGGACTGGCAAAGCAACACAAAATACGGAAAGCCAATTCAAGTTAAAGGCGGCATTCCCACTATCTTCCTCTGCAATCCAGGCCCAACATCCTCATATAGAGAATTCCTAGAAGAGGCGAAGAATTACGCACTCAAAAGCTGGACGCTCAAGAATGCAACATTCATCACCCTCGACAGGCCACTCTACTCAGATACCAATCAAAGTCCTCCACCGCAAAGCCAAGACGAAAGCCATTCGCCGTAA |
| Protein Sequence | MAPPKRFQINSKNYFVTYPKCSLTKEETLSQLLNLETPTNKKYIKICRELHENGEPHLHVLIQFEGKFNCKNHRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQVDGRSARGGCQNANDACADALNAGSAEAAMAIIREKLPKDFIFQYHNLKTNLDRIFQAPPEPYISPFSSSSFDQVPEELEGWVSENVCGAAARPWRPNSIVIEGDSRTGKTIWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHWKEFFGAQRDWQSNTKYGKPIQVKGGIPTIFLCNPGPTSSYREFLEEAKNYALKSWTLKNATFITLDRPLYSDTNQSPPPQSQDESHSP |
| NCBI Accession | NP_148933.1 |
|---|---|
| Location | 2200-2457 |
| Gene Name | C4 |
| Protein Name | C4 |
| Coding Region | ATGGGGAACCTCATCTCCACGTGCTTATTCAGTTCGAGGGAAAATTCAACTGCAAGAATCACCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTTGAATGGGGAGAATTCCAGGTCGACGGACGAAGTGCTAGAGGAGGCTGCCAGAATGCTAACGACGCATGCGCCGACGCTTTAA |
| Protein Sequence | MGNLISTCLFSSRENSTARITDSSTWYPQPGQHISIQTFRELNQAPTSSPTSTRMETHLNGENSRSTDEVLEEAARMLTTHAPTL |
References More References in PubMed
| 1 |
Tomato leaf curl Kunene virus: a novel tomato-infecting monopartite begomovirus from Namibia. Lett JM, et al. Arch Virol. 2020 Aug;165(8):1887-1889. doi: 10.1007/s00705-020-04666-8. Epub 2020 May 23. PMID: 32447622 |
|---|---|
| 2 |
Paximadis M, et al. J Gen Virol. 2001 Dec;82(Pt 12):3091-3097. doi: 10.1099/0022-1317-82-12-3091. PMID: 11714987 |
| 3 |
Zhou YC, et al. Arch Virol. 2008;153(4):693-706. doi: 10.1007/s00705-008-0042-9. Epub 2008 Feb 16. PMID: 18278427 |
| 4 |
N'cho J, et al. Arch Virol. 2021 Jun;166(6):1755-1758. doi: 10.1007/s00705-021-05019-9. Epub 2021 Mar 20. PMID: 33743049 |
| 5 |
Characterization of tobacco geminiviruses in the Old and New World. Paximadis M, et al. Arch Virol. 1999;144(4):703-17. doi: 10.1007/s007050050537. PMID: 10365162 |
| 6 |
First Molecular Identification of a Begomovirus Isolated from Tomato in Madagascar. Delatte H, et al. Plant Dis. 2002 Dec;86(12):1404. doi: 10.1094/PDIS.2002.86.12.1404C. PMID: 30818457 |