Tobacco leaf curl Zimbabwe virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000838925.1 |
| Isolate |
Zimbabwe |
| Release date |
2015/2/12 |
| Submitter |
Paximadis,M., Rey,M.E., Rey,C. |
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCCCCGGAAAAGAAGTGGGCCCCACATTTGATAATGATGTGCCGACCAATCATATCGTAGCCTGAAAGGCTAGATATTTGTTCTTTGTCTTTATATACTTGCTCGTCAATTATGGGCCTTGTCCATCATGTGGGATCCTCTATTGAATGAGTTTCCCGAATCTGTTCACGGATTTCGTTGTATGCTGGCCATCAAATATTTGCAGGCCGTTGAGGAAAGTTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTTATTTGTGTTATTAGGGCTCGAGACTATGTCGAAGCGACCAGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGCTGCTGTCCCCATTGTCCAAGGCATAAGCAAACGACGGTCGTGGACTTACCGGCCCAGTTACCGAAAGCCCAGAATGTACCGGATGTACAGAAGTCCTGATGTGCCTCGCGGTTGTGAGGGTCCGTGTAAGATACAGTCATTTGATCAGCGTGATTCCGTTGTTCATACGGGTACTGTTAGGTGTCTTAGCGATGTCACTAGGGGTGGTGGTCTTACGCATCGCACTGGTAAACGCTTTTGTATTAAGTCGATATATGTATTAGGTAAGATCTGGATGGATGAGAACGTGAAGAAGTCTAACCATACTAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGACCTAGTCCCCAGGATTTTGGTCAGGTGTTTAACATGTTTGATAACGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGTTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCTTCAGGATGCAAGGAGGCTGCTATCGTTAAGAGATTTTTCCGTCTGAATCATCATGTGACGTATAACCATCAAGAGGCCGCAAAGTACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGAATGTATTTCTATGATTCAGTATCGAATTAATAAAGTTTGAATTTTATTATATGATATTCGTGTACATCGATTGTTCCATCTAATACATCATACAATACATGTGCTACTGCTCTAATTACATTATTAAGCGTAATGACACCTAAATTATCCAAATACTTTAGGACTTGTGTCCTAAATACTCTTAAGAAATGACCAATCAGAGGCTGTAAGGTCGTCCAGACCTGGAAGTTCAGAAAACATTTGTGAATCCCCAATGCCTTCCTGAGGTTGTAGTTGAATCGTATTTGAAGGTGTATGATGTCGTAATTCTTGAAGAACGGTCTTATGTGGTGTTTGGTTATCTTGAAATAAAGCGGATTTGTTATCTCCCAGGTAAAAACGCCATTCTGAGCTTGATGCGCAGTGATGTCTTCCCCTGTGCGTAAATCCATGATTTCTGCAGCCGATATGTATGTAGTAGGAACACCCGCAGGCTAAATCTATTCGCTTACGGCGAATGGCTTTCGTCTTGGCTTTGCGGTGGAGGACTTTGATTGGTATCTGAGTAGAGTGGCCTGTCGAGGGTGATGAATGTTGCATTCTTGAGCGTCCAGCTTTTGAGTGCGTAATTCTTCGCCTCTTCTAGGAATTCTCTATATGAGGATGTTGGGCCTGGATTGCAGAGGAAGATAGTGGGAATGCCGCCTTTAACTTGAATTGGCTTTCCGTATTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCAAAGAATTCCTTCCAGTGCTTTAGATAATGCGGATCAACATCATCAATGACGTTATACCATGCGTCATTAGAATATACTTTTGGACTTAAGTCTAAATGACCACATAAGTAATTATGTGGCCCTAATGACCTAGCCCAAATAGTTTTGCCGGTACGACTATCGCCTTCTATTACAATACTATTGGGCCTCCAAGGCCGCGCAGCGGCACCACACACATTCTCAGAGACCCACCCTTCAAGTTCCTCAGGGACTTGATCAAAAGAAGAAGAAGAGAAAGGAGAAATATAAGGCTCTGGGGGAGCCTGGAAAATCCTATCTAAATTAGTCTTTAAATTATGATACTGAAAAATAAAATCTTTAGGGAGTTTTTCCCTAATAATAGCCATAGCTGCTTCAGCGGAACCTGCGTTTAAAGCGTCGGCGCATGCGTCGTTAGCATTCTGGCAGCCTCCTCTAGCACTTCGTCCGTCGACCTGGAATTCTCCCCATTCAAGTGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCGGAGCTTGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGGTGATTCTTGCAGTTGAATTTTCCCTCGAACTGAATAAGCACGTGGAGATGAGGTTCCCCATTTTCGTGTAGCTCTCTGCAGATTTTGATGTATTTTTTATTGGTGGGTGTTTCAAGGTTTAATAATTGGGAGAGTGTCTCTTCCTTTGTGAGAGAGCATTTTGGATAAGTGACGAAATAGTTTTTGGAATTTATTTGAAAGCGTTTCGGAGGAGCCATTTGGTCAATGGGTACCGATTGACTCTCAAATTGCATTCTCCTGGTATATCGGTACCCAATATATAGTGGGTACCGAATGGCACAAATGTAATTTGGGGAAAGTAATTTAAAATTCAAATTTTAAACGCTTAAAGCGGCCATCCGATTAATATT
Gene Information
|
NCBI Accession
|
NP_148928.1
|
|
Location
|
141-491 |
|
Gene Name
|
V1 |
|
Protein Name
|
V1 |
|
Coding Region
|
ATGTGGGATCCTCTATTGAATGAGTTTCCCGAATCTGTTCACGGATTTCGTTGTATGCTGGCCATCAAATATTTGCAGGCCGTTGAGGAAAGTTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTTATTTGTGTTATTAGGGCTCGAGACTATGTCGAAGCGACCAGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGCTGCTGTCCCCATTGTCCAAGGCATAAGCAAACGACGGTCGTGGACTTACCGGCCCAGTTACCGAAAGCCCAGAATGTACCGGATGTACAGAAGTCCTGA |
|
Protein Sequence
|
MWDPLLNEFPESVHGFRCMLAIKYLQAVEESYEPNTLGHDLIRDLICVIRARDYVEATRRYNHFHARLEGSSKAELRQPIYQPCCCPHCPRHKQTTVVDLPAQLPKAQNVPDVQKS |
|
NCBI Accession
|
NP_148929.1
|
|
Location
|
301-1077 |
|
Gene Name
|
V2 |
|
Protein Name
|
V2 |
|
Coding Region
|
ATGTCGAAGCGACCAGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGCTGCTGTCCCCATTGTCCAAGGCATAAGCAAACGACGGTCGTGGACTTACCGGCCCAGTTACCGAAAGCCCAGAATGTACCGGATGTACAGAAGTCCTGATGTGCCTCGCGGTTGTGAGGGTCCGTGTAAGATACAGTCATTTGATCAGCGTGATTCCGTTGTTCATACGGGTACTGTTAGGTGTCTTAGCGATGTCACTAGGGGTGGTGGTCTTACGCATCGCACTGGTAAACGCTTTTGTATTAAGTCGATATATGTATTAGGTAAGATCTGGATGGATGAGAACGTGAAGAAGTCTAACCATACTAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGACCTAGTCCCCAGGATTTTGGTCAGGTGTTTAACATGTTTGATAACGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGTTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCTTCAGGATGCAAGGAGGCTGCTATCGTTAAGAGATTTTTCCGTCTGAATCATCATGTGACGTATAACCATCAAGAGGCCGCAAAGTACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGAATGTATTTCTATGATTCAGTATCGAATTAA |
|
Protein Sequence
|
MSKRPGDIIISTPVSKVRRRLNFDSPYTNRAAVPIVQGISKRRSWTYRPSYRKPRMYRMYRSPDVPRGCEGPCKIQSFDQRDSVVHTGTVRCLSDVTRGGGLTHRTGKRFCIKSIYVLGKIWMDENVKKSNHTNTCMFWVVRDRRPYGPSPQDFGQVFNMFDNEPSTATVQNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEAAKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSVSN |
|
NCBI Accession
|
NP_148930.1
|
|
Location
|
1074-1478 |
|
Gene Name
|
C3 |
|
Protein Name
|
C3 |
|
Coding Region
|
ATGGATTTACGCACAGGGGAAGACATCACTGCGCATCAAGCTCAGAATGGCGTTTTTACCTGGGAGATAACAAATCCGCTTTATTTCAAGATAACCAAACACCACATAAGACCGTTCTTCAAGAATTACGACATCATACACCTTCAAATACGATTCAACTACAACCTCAGGAAGGCATTGGGGATTCACAAATGTTTTCTGAACTTCCAGGTCTGGACGACCTTACAGCCTCTGATTGGTCATTTCTTAAGAGTATTTAGGACACAAGTCCTAAAGTATTTGGATAATTTAGGTGTCATTACGCTTAATAATGTAATTAGAGCAGTAGCACATGTATTGTATGATGTATTAGATGGAACAATCGATGTACACGAATATCATATAATAAAATTCAAACTTTATTAA |
|
Protein Sequence
|
MDLRTGEDITAHQAQNGVFTWEITNPLYFKITKHHIRPFFKNYDIIHLQIRFNYNLRKALGIHKCFLNFQVWTTLQPLIGHFLRVFRTQVLKYLDNLGVITLNNVIRAVAHVLYDVLDGTIDVHEYHIIKFKLY |
|
NCBI Accession
|
NP_148931.1
|
|
Location
|
1219-1626 |
|
Gene Name
|
C2 |
|
Protein Name
|
C2 |
|
Coding Region
|
ATGCAACATTCATCACCCTCGACAGGCCACTCTACTCAGATACCAATCAAAGTCCTCCACCGCAAAGCCAAGACGAAAGCCATTCGCCGTAAGCGAATAGATTTAGCCTGCGGGTGTTCCTACTACATACATATCGGCTGCAGAAATCATGGATTTACGCACAGGGGAAGACATCACTGCGCATCAAGCTCAGAATGGCGTTTTTACCTGGGAGATAACAAATCCGCTTTATTTCAAGATAACCAAACACCACATAAGACCGTTCTTCAAGAATTACGACATCATACACCTTCAAATACGATTCAACTACAACCTCAGGAAGGCATTGGGGATTCACAAATGTTTTCTGAACTTCCAGGTCTGGACGACCTTACAGCCTCTGATTGGTCATTTCTTAAGAGTATTTAG |
|
Protein Sequence
|
MQHSSPSTGHSTQIPIKVLHRKAKTKAIRRKRIDLACGCSYYIHIGCRNHGFTHRGRHHCASSSEWRFYLGDNKSALFQDNQTPHKTVLQELRHHTPSNTIQLQPQEGIGDSQMFSELPGLDDLTASDWSFLKSI |
|
NCBI Accession
|
NP_148932.1
|
|
Location
|
1535-2614 |
|
Gene Name
|
C1 |
|
Protein Name
|
C1 |
|
Coding Region
|
ATGGCTCCTCCGAAACGCTTTCAAATAAATTCCAAAAACTATTTCGTCACTTATCCAAAATGCTCTCTCACAAAGGAAGAGACACTCTCCCAATTATTAAACCTTGAAACACCCACCAATAAAAAATACATCAAAATCTGCAGAGAGCTACACGAAAATGGGGAACCTCATCTCCACGTGCTTATTCAGTTCGAGGGAAAATTCAACTGCAAGAATCACCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTTGAATGGGGAGAATTCCAGGTCGACGGACGAAGTGCTAGAGGAGGCTGCCAGAATGCTAACGACGCATGCGCCGACGCTTTAAACGCAGGTTCCGCTGAAGCAGCTATGGCTATTATTAGGGAAAAACTCCCTAAAGATTTTATTTTTCAGTATCATAATTTAAAGACTAATTTAGATAGGATTTTCCAGGCTCCCCCAGAGCCTTATATTTCTCCTTTCTCTTCTTCTTCTTTTGATCAAGTCCCTGAGGAACTTGAAGGGTGGGTCTCTGAGAATGTGTGTGGTGCCGCTGCGCGGCCTTGGAGGCCCAATAGTATTGTAATAGAAGGCGATAGTCGTACCGGCAAAACTATTTGGGCTAGGTCATTAGGGCCACATAATTACTTATGTGGTCATTTAGACTTAAGTCCAAAAGTATATTCTAATGACGCATGGTATAACGTCATTGATGATGTTGATCCGCATTATCTAAAGCACTGGAAGGAATTCTTTGGGGCCCAAAGGGACTGGCAAAGCAACACAAAATACGGAAAGCCAATTCAAGTTAAAGGCGGCATTCCCACTATCTTCCTCTGCAATCCAGGCCCAACATCCTCATATAGAGAATTCCTAGAAGAGGCGAAGAATTACGCACTCAAAAGCTGGACGCTCAAGAATGCAACATTCATCACCCTCGACAGGCCACTCTACTCAGATACCAATCAAAGTCCTCCACCGCAAAGCCAAGACGAAAGCCATTCGCCGTAA |
|
Protein Sequence
|
MAPPKRFQINSKNYFVTYPKCSLTKEETLSQLLNLETPTNKKYIKICRELHENGEPHLHVLIQFEGKFNCKNHRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQVDGRSARGGCQNANDACADALNAGSAEAAMAIIREKLPKDFIFQYHNLKTNLDRIFQAPPEPYISPFSSSSFDQVPEELEGWVSENVCGAAARPWRPNSIVIEGDSRTGKTIWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHWKEFFGAQRDWQSNTKYGKPIQVKGGIPTIFLCNPGPTSSYREFLEEAKNYALKSWTLKNATFITLDRPLYSDTNQSPPPQSQDESHSP |
|
NCBI Accession
|
NP_148933.1
|
|
Location
|
2200-2457 |
|
Gene Name
|
C4 |
|
Protein Name
|
C4 |
|
Coding Region
|
ATGGGGAACCTCATCTCCACGTGCTTATTCAGTTCGAGGGAAAATTCAACTGCAAGAATCACCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTTGAATGGGGAGAATTCCAGGTCGACGGACGAAGTGCTAGAGGAGGCTGCCAGAATGCTAACGACGCATGCGCCGACGCTTTAA |
|
Protein Sequence
|
MGNLISTCLFSSRENSTARITDSSTWYPQPGQHISIQTFRELNQAPTSSPTSTRMETHLNGENSRSTDEVLEEAARMLTTHAPTL |