Genus | Begomovirus |
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NCBI Assembly | GCF_000860165.1 |
Isolate | China:Yunnan |
Release date | 2015/2/13 |
Submitter | Zhou,X.P., Xie,Y., Zhang,Z.K., Zhou,X. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_722552.1 |
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Location | 134-490 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGATCCATTATTAAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGATACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDLISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKIMDEQAHEQKAQDVQDVQKSRCP |
NCBI Accession | NP_722553.1 |
---|---|
Location | 294-1064 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTTCAATCTTTTGATGCTAAGAACGATATTGGTCACATGGGCAAGGTCTTATGTTTGTCCGACGTTACCCGTGGTATTGGGCTTACCCATCGAGTTGGCAAGCGTTTCTGTGTCAAATCACTTTATTTTGTTGGCAAGATCTGGATGGATGAAAATATTAAGGTTAAGAACCACACTAACACCGTTTTATTCTGGATAGTTAGAGATCGGCGTCCTACTGGAACGCCTAATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCTAGCACTGCTACTGTGAAGAACGATCAGCGTGATCGTTTTCAGGTTATAAGGAGGTTCCAGGCAACGGTGACTGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTTTACAATCATCAGGAAGCTGGCAAGTATGAGAACCATACCGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTCAGGAGTTATTTTTATGACTCAGTGACGAATTAA |
Protein Sequence | MSKRPADIIISTPASKARRRLNFDSPYVSRAAAPIVRVTKARSWTNRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVLCLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEPSTATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
NCBI Accession | NP_722554.1 |
---|---|
Location | 1061-1465 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAGAAATCCCCTCTATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAAACACGACATCATACAGATCCAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGAGCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAAGGTTCAATGTATGAAATATTTAGATAATTTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAAAACAGAATATGTAACAAATTCTAATATAATAAAATTCAATCTTTATTAA |
Protein Sequence | MDFRTGELLTATQCESGVYTWTIRNPLYFKITKHHERPFNTKHDIIQIQIQFNHNLRKALGIHQCFLSFQIWTRLQPQTWRFLRVFKVQCMKYLDNLGVISINNVIRACNHVLWDVLEKTEYVTNSNIIKFNLY |
NCBI Accession | NP_722555.1 |
---|---|
Location | 1206-1613 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | ATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCAGTTCGCAGGCGGAGAGTTGATCTAACGTGTGGGTGCTCATACTACTTCGGCATAAATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAGAAATCCCCTCTATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAAACACGACATCATACAGATCCAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGAGCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAA |
Protein Sequence | MRNSSPSTAHCTQVPIKVQHRIAKRRPVRRRRVDLTCGCSYYFGINCANHGFSHRGITHCNSMREWRVYLDDQKSPLFQDNQAPRETIQHQTRHHTDPNTVQPQPEESVGNTPVFSELPDLDSLTTSDLAFLKSI |
NCBI Accession | NP_722556.1 |
---|---|
Location | 1513-2604 |
Gene Name | AC1 |
Protein Name | Rep protein |
Coding Region | ATGGCTCCTCCCAAACGTTTTAAAATACAAGCCAAAAATTATTTCCTCACTTATCCACAGTGCTCTCTCAACAAAGAAGAAGCACTTTCCCAATTACAAGCCCTAGAGACACCAACTAATAAAAAATATATCAAAATCTGCAGAGAGCTTCACGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAGTTCGAAGGGAAATACGTCTGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGAAGATCTGCAAGAGGGGGTCAACAGACAGCCAATGACGCTTACGCCCAGGCACTTAACAGCGGCAGTAAGTCAGAGGCTCTTAATGTAATTAAGGAGTTAGCTCCTAAAGATTTTGTTTTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGGTTCTCCTTTTTTATCTTTCATCATTTGGATCAAGTTCCCAAAGAACTTGAAGAATGGGGCTGCTGATAATGTAAGGCATGCCGGTGCGCGGCCATGGAGACCCATCAGTATTGTCATAGAGGGAGAGAGTCGTACAGGAAAAACCATGTGGGCGCGTTCATTGGGCCCACATAATTATCTGTGCGGTCATCTGGATCTGAGTCCAAAGGTGTACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACCAAGTACGGGAAACCAATTCAAATTAAAGGTGGAATCCCAACTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAATTCTTGGAGGAAGAAAAGAATTCAGCTTTAAAAGAGTGGGCATTAAAGAATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCAGTTCGCAGGCGGAGAGTTGA |
Protein Sequence | MAPPKRFKIQAKNYFLTYPQCSLNKEEALSQLQALETPTNKKYIKICRELHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFHNLNANLDRIFAPPLEVFGSPFLSFIIWIKFPKNLKNGAADNVRHAGARPWRPISIVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEEKNSALKEWALKNAEFITLNSPLYSGTNQSATQNSQEEASSQAES |
NCBI Accession | NP_722557.1 |
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Location | 2157-2447 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGAGCCCTCATCTCCACGTGCTTATCCAGTTCGAAGGGAAATACGTCTGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGAAGATCTGCAAGAGGGGGTCAACAGACAGCCAATGACGCTTACGCCCAGGCACTTAACAGCGGCAGTAAGTCAGAGGCTCTTAATGTAA |
Protein Sequence | MGALISTCLSSSKGNTSARITDSSTWYPQPGQHISIRTFRELNPAPTSSPTSTRTETPSNGESFRSTEDLQEGVNRQPMTLTPRHLTAAVSQRLLM |
1 |
Xie Y, et al. Virology. 2024 Jun;594:110040. doi: 10.1016/j.virol.2024.110040. Epub 2024 Mar 5. PMID: 38471198 |
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2 |
Mei Y, et al. PLoS Pathog. 2018 Jan 2;14(1):e1006789. doi: 10.1371/journal.ppat.1006789. eCollection 2018 Jan. PMID: 29293689 |
3 |
Liu Z, et al. Plant Dis. 2008 Jan;92(1):177. doi: 10.1094/PDIS-92-1-0177B. PMID: 30786379 |
4 |
ty-5 Confers Broad-Spectrum Resistance to Geminiviruses. Ren Y, et al. Viruses. 2022 Aug 17;14(8):1804. doi: 10.3390/v14081804. PMID: 36016426 |
5 |
Seepiban C, et al. Virol J. 2017 May 30;14(1):99. doi: 10.1186/s12985-017-0763-z. PMID: 28558726 |
6 |
Mei Y, et al. PLoS Pathog. 2020 Oct 1;16(10):e1008829. doi: 10.1371/journal.ppat.1008829. eCollection 2020 Oct. PMID: 33002088 |
7 |
Incidence and Molecular Identification of Begomoviruses Infecting Tomato and Pepper in Myanmar. Kwak HR, et al. Plants (Basel). 2022 Apr 10;11(8):1031. doi: 10.3390/plants11081031. PMID: 35448759 |
8 |
Mei Y, et al. J Virol. 2020 Sep 29;94(20):e01307-20. doi: 10.1128/JVI.01307-20. Print 2020 Sep 29. PMID: 32759325 |
9 |
Mei Y, et al. New Phytol. 2020 Feb;225(3):1311-1326. doi: 10.1111/nph.16208. Epub 2019 Oct 29. PMID: 31537050 |
10 |
A recombinant begomovirus resulting from exchange of the C4 gene. Xie Y, et al. J Gen Virol. 2013 Aug;94(Pt 8):1896-1907. doi: 10.1099/vir.0.053181-0. Epub 2013 May 29. PMID: 23720217 |