Telfairia golden mosaic virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_001678335.4 |
| Isolate |
Cameroon |
| Release date |
2018/8/7 |
| Submitter |
Leke,W.N., Khatabi,B., Fondong,V.N., Brown,J.K. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCCCGCCCATCTCAGCCGTACGGTCCCACGCACTACTTCCTGTCGGCCAATCATAATGCACGCTGAAAGCTACTCTGCGTATGTGTTGTCTTTATATACGTGGTCCCCATACTTCCATTATCGCAATATGTGGGACCCCCTTCTGAATGAGTTTCCCGAATCAGTTCACGGTTTCCGGTCTATGTTAGCCGTAAAGTATTTGCAGGCTGTGGAGCAGACGTACGAGCCCAACACGTTGGGCCACGATTTGATTCGGGATTTGATTTGTGTTATACGTGCCAAGGACTATGTCGAAGCGACCCGGAGATATAATTATTTCCACGCCCGTCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGTTGCTGTCCCCATTGTCCAAGGCACAAGCAAACGACGATCATGGACGTATCGTCCCAGTTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCTGATGTCCCACGTGGCTGTGAAGGACCATGTAAGATCCAGTCGTTTGATCAGCGTGATTCAGTCGTCCATACCGGTAATGTTAGGTGTCTAAGCGATGTGACTCGCGGTGGTGGTTTAACACATCGCACTGGTAAACGGTTTTGTATTAAGTCAATTTACGTCTTAGGTAAGGTATGGATGGACGAGAATGTTAAAAAGTCCAACCACACTAACACATGTATGTTTTGGTTAGTTAGAGATAGACGTCCGTATGGTAACAGTCCTCAGGACTTTGGTCAGGTTTTTAACATGTTTGATAATGAGCCGAGTACCGCAACAGTTATGAACGACAAGCGTGATCGCTATCAGGTATTGCGGAGGTTCCAGGTAACTGTAACCGGAGGCCCGTCTGGATGTAAGGAGGCTGCTATTGTGAAGAGATTCTTTCGTCTCAATCACCATGTCACTTACAACCACCAGGAGGGCGCTAAGTACGAGAATCACACGGAGAATGCTTTGCTTTTGTATATGGCGTGTACTCACGCCTCTAACCCTGTGTATGCAAGTTTGAAGATACGGATGTATTTTTATGATTCCGTGTTAAATTAATAAAGCTTGAATTTTATATCATGTTTGTCAATTACATCAATCGTCCCGTCTAGGACGTCAAACAGTACATGAGCGACAGCTCTAACGACAAAATTAATGGAAATTACACCGACCATATCTAGGTATTTCACAACCTGAGTCCTAAAGACTTTTAAGAAAAGACCAGTCGGAGGACGTAAGGTCGTCCAGACTTTGAAGTTCAGAAAACACTTGTGAATCCCCAGTTCCTTCCTCAGGTTGTGGTTGAACCGGATTTGAATTGATATTATGTCGTGGGGGAACGAGAAGGGCCGTTCCGCGTGGTCTATTATTTTGAAGTACAGGGGATTGTGTATCGTCCAAAAGTAGACGGAATTCTGCGCTTGATCCGCAGTGATGAGTTCCCCGGTGCGCAAATCCATTCAGAGCGCAGTCTATGTGCAGGTAGAACGAGCAGCCGCAATCGAGATCAATGCGCTTCCGTCGTATCGCCTTCTTCTTGGCGATTTGGTGACTGACCTTGATCGGCACTTGAGAACAGTGGCTCTTGGATGGTGACGAAGCTCGCATTCTTTAATGCCCAAGCTTTCAAAGCTGCATTCTTTTCTTCGTCCAAGAAATCTTTATACGAGGACGTCGACCCAGGATTGCACAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATCGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCCCGCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAGTGCGGGTCGACGTCATCAATGACGTTATACCATGCTTCGTTACTGTACACCTTTGGGCTTAGGTCCAAATGACCGCACAGATAATTGTGCGGACCCAACGAACGGGCCCAACAAGTTTTGCCCGTCCTACTATCCCCCTCTATTACTATACTATTGGGCCTAAAAGGCCGCGCAGCTGCAGGCTTGACGTTTTCACTGACCCATTCTTCAAGTTCCTCCGGAACTCTCGTGAAAGAAGACGACCGGAAGGGAGATGTGTATGTTTCCGGCGGAGTCTGGAAAATACGATCTAAATTACTGTTTAAATTGTGAAAATGTAATAAATAATCCTTGGGGGCCAACTCTCGTATTACATTAAGAGCCTCCGATTTACTTCCTGTGTTAAGTGCCTTTGCATATGCGTCGTTAGCTGATTGTTGGCCCCCTCGTGCCGATCTCCCGTCGATCTGAAACTCTCCCCATTCGAGTGTATCTCCGTCCTTGTCCAAATACGACTTGACGTCGGAACTGGACTTAGCGCCCTGAATGTTGGGGTGGAAACTGGTGCTACAGCTTGGGTGTACACAATCGAAGAGACGATTGTTGGTGCACGTGAGTTTCCCCTCGAACTGGATAAGCACGTGGAGATGAGGCTCCCCATTCTGATGAAGCTCTCGACAGATTTTGATGTATTTAGGATTTGTGGGAAGCGACAGGTTTCGGAGAAACGCCAAGAGAGCCTCTTTTGCGATAGAGCATTTGGGATATGTGAGGAATATATTTTTACCCTGTACTCTAAAACGTGGGTGTCTCATTTTGACAATCGATTGGAGACACCCTCCCGCAACTCTATCCCTTATAATAGAGTCAATATATACTGTCTCTATATGGCATTATTGTAAATATGTAAAGGTATACAGACCTACTAGCGGCCATCCGTTTAATATT
Gene Information
|
NCBI Accession
|
YP_009259492.1
|
|
Location
|
67-489 |
|
Protein Name
|
AV2 |
|
Coding Region
|
ATGCACGCTGAAAGCTACTCTGCGTATGTGTTGTCTTTATATACGTGGTCCCCATACTTCCATTATCGCAATATGTGGGACCCCCTTCTGAATGAGTTTCCCGAATCAGTTCACGGTTTCCGGTCTATGTTAGCCGTAAAGTATTTGCAGGCTGTGGAGCAGACGTACGAGCCCAACACGTTGGGCCACGATTTGATTCGGGATTTGATTTGTGTTATACGTGCCAAGGACTATGTCGAAGCGACCCGGAGATATAATTATTTCCACGCCCGTCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGTTGCTGTCCCCATTGTCCAAGGCACAAGCAAACGACGATCATGGACGTATCGTCCCAGTTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCTGA |
|
Protein Sequence
|
MHAESYSAYVLSLYTWSPYFHYRNMWDPLLNEFPESVHGFRSMLAVKYLQAVEQTYEPNTLGHDLIRDLICVIRAKDYVEATRRYNYFHARLEGASKAELRQPIYQPCCCPHCPRHKQTTIMDVSSQLPKAQDVQDVQKS |
|
NCBI Accession
|
YP_009259493.1
|
|
Location
|
299-1075 |
|
Protein Name
|
AV1 |
|
Coding Region
|
ATGTCGAAGCGACCCGGAGATATAATTATTTCCACGCCCGTCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGTTGCTGTCCCCATTGTCCAAGGCACAAGCAAACGACGATCATGGACGTATCGTCCCAGTTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCTGATGTCCCACGTGGCTGTGAAGGACCATGTAAGATCCAGTCGTTTGATCAGCGTGATTCAGTCGTCCATACCGGTAATGTTAGGTGTCTAAGCGATGTGACTCGCGGTGGTGGTTTAACACATCGCACTGGTAAACGGTTTTGTATTAAGTCAATTTACGTCTTAGGTAAGGTATGGATGGACGAGAATGTTAAAAAGTCCAACCACACTAACACATGTATGTTTTGGTTAGTTAGAGATAGACGTCCGTATGGTAACAGTCCTCAGGACTTTGGTCAGGTTTTTAACATGTTTGATAATGAGCCGAGTACCGCAACAGTTATGAACGACAAGCGTGATCGCTATCAGGTATTGCGGAGGTTCCAGGTAACTGTAACCGGAGGCCCGTCTGGATGTAAGGAGGCTGCTATTGTGAAGAGATTCTTTCGTCTCAATCACCATGTCACTTACAACCACCAGGAGGGCGCTAAGTACGAGAATCACACGGAGAATGCTTTGCTTTTGTATATGGCGTGTACTCACGCCTCTAACCCTGTGTATGCAAGTTTGAAGATACGGATGTATTTTTATGATTCCGTGTTAAATTAA |
|
Protein Sequence
|
MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVAVPIVQGTSKRRSWTYRPSYRKPRMYRMYRSPDVPRGCEGPCKIQSFDQRDSVVHTGNVRCLSDVTRGGGLTHRTGKRFCIKSIYVLGKVWMDENVKKSNHTNTCMFWLVRDRRPYGNSPQDFGQVFNMFDNEPSTATVMNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEGAKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSVLN |
|
NCBI Accession
|
YP_009259494.1
|
|
Location
|
1072-1476 |
|
Protein Name
|
AC3 |
|
Coding Region
|
ATGGATTTGCGCACCGGGGAACTCATCACTGCGGATCAAGCGCAGAATTCCGTCTACTTTTGGACGATACACAATCCCCTGTACTTCAAAATAATAGACCACGCGGAACGGCCCTTCTCGTTCCCCCACGACATAATATCAATTCAAATCCGGTTCAACCACAACCTGAGGAAGGAACTGGGGATTCACAAGTGTTTTCTGAACTTCAAAGTCTGGACGACCTTACGTCCTCCGACTGGTCTTTTCTTAAAAGTCTTTAGGACTCAGGTTGTGAAATACCTAGATATGGTCGGTGTAATTTCCATTAATTTTGTCGTTAGAGCTGTCGCTCATGTACTGTTTGACGTCCTAGACGGGACGATTGATGTAATTGACAAACATGATATAAAATTCAAGCTTTATTAA |
|
Protein Sequence
|
MDLRTGELITADQAQNSVYFWTIHNPLYFKIIDHAERPFSFPHDIISIQIRFNHNLRKELGIHKCFLNFKVWTTLRPPTGLFLKVFRTQVVKYLDMVGVISINFVVRAVAHVLFDVLDGTIDVIDKHDIKFKLY |
|
NCBI Accession
|
YP_009259495.1
|
|
Location
|
1217-1624 |
|
Protein Name
|
AC2 |
|
Coding Region
|
ATGCGAGCTTCGTCACCATCCAAGAGCCACTGTTCTCAAGTGCCGATCAAGGTCAGTCACCAAATCGCCAAGAAGAAGGCGATACGACGGAAGCGCATTGATCTCGATTGCGGCTGCTCGTTCTACCTGCACATAGACTGCGCTCTGAATGGATTTGCGCACCGGGGAACTCATCACTGCGGATCAAGCGCAGAATTCCGTCTACTTTTGGACGATACACAATCCCCTGTACTTCAAAATAATAGACCACGCGGAACGGCCCTTCTCGTTCCCCCACGACATAATATCAATTCAAATCCGGTTCAACCACAACCTGAGGAAGGAACTGGGGATTCACAAGTGTTTTCTGAACTTCAAAGTCTGGACGACCTTACGTCCTCCGACTGGTCTTTTCTTAAAAGTCTTTAG |
|
Protein Sequence
|
MRASSPSKSHCSQVPIKVSHQIAKKKAIRRKRIDLDCGCSFYLHIDCALNGFAHRGTHHCGSSAEFRLLLDDTQSPVLQNNRPRGTALLVPPRHNINSNPVQPQPEEGTGDSQVFSELQSLDDLTSSDWSFLKSL |
|
NCBI Accession
|
YP_009259496.1
|
|
Location
|
1524-2609 |
|
Protein Name
|
AC1 |
|
Coding Region
|
ATGAGACACCCACGTTTTAGAGTACAGGGTAAAAATATATTCCTCACATATCCCAAATGCTCTATCGCAAAAGAGGCTCTCTTGGCGTTTCTCCGAAACCTGTCGCTTCCCACAAATCCTAAATACATCAAAATCTGTCGAGAGCTTCATCAGAATGGGGAGCCTCATCTCCACGTGCTTATCCAGTTCGAGGGGAAACTCACGTGCACCAACAATCGTCTCTTCGATTGTGTACACCCAAGCTGTAGCACCAGTTTCCACCCCAACATTCAGGGCGCTAAGTCCAGTTCCGACGTCAAGTCGTATTTGGACAAGGACGGAGATACACTCGAATGGGGAGAGTTTCAGATCGACGGGAGATCGGCACGAGGGGGCCAACAATCAGCTAACGACGCATATGCAAAGGCACTTAACACAGGAAGTAAATCGGAGGCTCTTAATGTAATACGAGAGTTGGCCCCCAAGGATTATTTATTACATTTTCACAATTTAAACAGTAATTTAGATCGTATTTTCCAGACTCCGCCGGAAACATACACATCTCCCTTCCGGTCGTCTTCTTTCACGAGAGTTCCGGAGGAACTTGAAGAATGGGTCAGTGAAAACGTCAAGCCTGCAGCTGCGCGGCCTTTTAGGCCCAATAGTATAGTAATAGAGGGGGATAGTAGGACGGGCAAAACTTGTTGGGCCCGTTCGTTGGGTCCGCACAATTATCTGTGCGGTCATTTGGACCTAAGCCCAAAGGTGTACAGTAACGAAGCATGGTATAACGTCATTGATGACGTCGACCCGCACTATCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGCGGGACTGGCAAAGCAACACAAAGTACGGAAAGCCGATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTGTGCAATCCTGGGTCGACGTCCTCGTATAAAGATTTCTTGGACGAAGAAAAGAATGCAGCTTTGAAAGCTTGGGCATTAAAGAATGCGAGCTTCGTCACCATCCAAGAGCCACTGTTCTCAAGTGCCGATCAAGGTCAGTCACCAAATCGCCAAGAAGAAGGCGATACGACGGAAGCGCATTGA |
|
Protein Sequence
|
MRHPRFRVQGKNIFLTYPKCSIAKEALLAFLRNLSLPTNPKYIKICRELHQNGEPHLHVLIQFEGKLTCTNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSYLDKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNTGSKSEALNVIRELAPKDYLLHFHNLNSNLDRIFQTPPETYTSPFRSSSFTRVPEELEEWVSENVKPAAARPFRPNSIVIEGDSRTGKTCWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGSTSSYKDFLDEEKNAALKAWALKNASFVTIQEPLFSSADQGQSPNRQEEGDTTEAH |
|
NCBI Accession
|
YP_009259497.1
|
|
Location
|
2165-2455 |
|
Protein Name
|
AC4 |
|
Coding Region
|
ATGGGGAGCCTCATCTCCACGTGCTTATCCAGTTCGAGGGGAAACTCACGTGCACCAACAATCGTCTCTTCGATTGTGTACACCCAAGCTGTAGCACCAGTTTCCACCCCAACATTCAGGGCGCTAAGTCCAGTTCCGACGTCAAGTCGTATTTGGACAAGGACGGAGATACACTCGAATGGGGAGAGTTTCAGATCGACGGGAGATCGGCACGAGGGGGCCAACAATCAGCTAACGACGCATATGCAAAGGCACTTAACACAGGAAGTAAATCGGAGGCTCTTAATGTAA |
|
Protein Sequence
|
MGSLISTCLSSSRGNSRAPTIVSSIVYTQAVAPVSTPTFRALSPVPTSSRIWTRTEIHSNGESFRSTGDRHEGANNQLTTHMQRHLTQEVNRRLLM |