Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000864705.1 |
Isolate | USA |
Release date | 2015/2/13 |
Submitter | Lotrakul,P., Valverde,R.A., Clark,C.A., Sim,J., De La Torre,R. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_808840.1 |
---|---|
Location | 132-476 |
Gene Name | AV2 |
Protein Name | precoat protein AV2 |
Coding Region | ATGGCTGAATTGTGGGACCCTTTGCAGAACCCACTACCAGATACTTTATACGGTTTTAGGTGTATGCTATCCGTAAAATACTTGCAAAGTATTTTGAAGAAATACGAGCCAGGAACCTTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGAGTCAGGCAGTATGACAGGGCGAATGCGCGTTTCGCCGAGATTTCATCCATATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGA |
Protein Sequence | MAELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYEPGTLGFELCSELIRIFRVRQYDRANARFAEISSIWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG |
NCBI Accession | NP_808841.1 |
---|---|
Location | 301-1065 |
Gene Name | AV1 |
Protein Name | coat protein AV1 |
Coding Region | ATGACAGGGCGAATGCGCGTTTCGCCGAGATTTCATCCATATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCGAAGGGATGTGTGGGTCCCTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACTGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTGTGAAGTCCATGGGTATAGATGGGAAGGTCTGGATGGATGATAATGTGGCCAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGACAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACCATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAGGTCTTGAAGAAGTTTTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAGCAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTACAATCACAAGGAAGAAGCTAAGTATGAGAATCAATTAGAGAATGCACTTATGCTGTATAGTGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCATAATAATTAA |
Protein Sequence | MTGRMRVSPRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN |
NCBI Accession | NP_808842.1 |
---|---|
Location | 1081-1515 |
Gene Name | AC3 |
Protein Name | AC3 |
Coding Region | ATGGATTCACGCACAGGGGAATCAATAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCGTTCCATCTCAGAATAATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGGGTGAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATCTTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAAATGGCGCATATGTAATGAATTAGCAAATTTAGGGTTTTTTAGTTTAGTTAATTTAGTTTTTGTTATTAGATATCTTCCAAGAGTATGTTCTTGGATAGATGAATTAGATACTGTAGATTGTAATGATGATGTAAAGGTATTACTCTATTAA |
Protein Sequence | MDSRTGESISHAQTTRAVEFDTNPMSVGRTAPFHLRIMYVHESTQGRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNELANLGFFSLVNLVFVIRYLPRVCSWIDELDTVDCNDDVKVLLY |
NCBI Accession | NP_808843.1 |
---|---|
Location | 1232-1678 |
Gene Name | AC2 |
Protein Name | transactivator protein AC2 |
Coding Region | ATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCCATTCAGGAGCCACTGCACACAGAGGCGAAGAAGGCCAAGAGGAAAGTTCCTGAACAGAGGACGAGGATAGTGTGGAAGGGTTGCGGCTGTTCAGCCTTCATAACAACAACCTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCAATAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCGTTCCATCTCAGAATAATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGGGTGAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATCTTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAA |
Protein Sequence | MSNPLSGYKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGCGCSAFITTTCKYQHGFTHRGINKSCSDYESSRIRHQPHVCGSDCTVPSQNNVCPREHTGENHPQIPAEGELQGKEATGIPQDLPPIPDLDDPSNWCYSQLDWYFGTP |
NCBI Accession | NP_808844.1 |
---|---|
Location | 1587-2681 |
Gene Name | AC1 |
Protein Name | replication initiation protein AC1 |
Coding Region | ATGGCTCCTCCAAAACGTTTTAAAATTCAGGCCAAAAATTATTTTATTACTTATCCACGCTGTTCTCTCTCAAAAGAGGACTGCCTAGCCCAACTCCTAAATATACAAACACCCAGCAACAAAAAATATATACACGTAGCAAGAGAACTGCACGAGGATGGGGAACCTCACCTCCATGTGTTGGTGCAGTTCGAAGGCAAATTCGTCTGCACAAATAGCAGATTCTTCGATCTGGTCTCACCGAACAGATCGAATCACTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACGTCGATAAGGACGGGGATACCATCACCTGGGGTGAATTCCAGGTCGACGGCAGATCTGCTAGAGGAGGCCAGCAGACTGCTAACGACGCAGCCGCAGAGGCTCTAAACGCAGGTTCTAAAGAAGCTGCGTTGCAAATAATCAGGGAGAAACTCCCTGAAAAATATTTATTTCAATTTCATAATTTAGTTAGTAATTTAGATAGGATTTTTTCTCCTCCACCTTCTGTATATTCTTCCCCTTTTTCGTCTTCTTCTTTCAATGCCGTTCCTGACATTATCAGCGACTGGGCCGCTGAAAATGTCATGGATTCCGCTGCGCGGCCGGATAGACCCATTTCCATTGTTATTGAAGGCCCAAGCAGAATAGGCAAAACAGTATGGGCCAGGTCTTTGGGCCCTCACAATTATTTGTGTGGGCATTTAGATCTAAGCCCAAAAGTATACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAATCCAACTGTAAATACGGAAAGCCAGTTCGAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGATCCTCATTTAAACTCTGGTTGGACAAACCAGAGCAAGGAGCACTCAAGAATTGGGCAACAGCAAACGCTATATTCTGCGATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCCATTCAGGAGCCACTGCACACAGAGGCGAAGAAGGCCAAGAGGAAAGTTCCTGA |
Protein Sequence | MAPPKRFKIQAKNYFITYPRCSLSKEDCLAQLLNIQTPSNKKYIHVARELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPNRSNHFHPNIQGAKSSSDVKSYVDKDGDTITWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQFHNLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVRIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPFWVQEEVSHSGATAHRGEEGQEESS |
NCBI Accession | NP_808845.1 |
---|---|
Location | 2267-2524 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGGGGAACCTCACCTCCATGTGTTGGTGCAGTTCGAAGGCAAATTCGTCTGCACAAATAGCAGATTCTTCGATCTGGTCTCACCGAACAGATCGAATCACTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACGTCGATAAGGACGGGGATACCATCACCTGGGGTGAATTCCAGGTCGACGGCAGATCTGCTAGAGGAGGCCAGCAGACTGCTAACGACGCAGCCGCAGAGGCTCTAA |
Protein Sequence | MGNLTSMCWCSSKANSSAQIADSSIWSHRTDRITFTPTSRELNPAPMSSPTSIRTGIPSPGVNSRSTADLLEEASRLLTTQPQRL |
1 |
Andreason SA, et al. Plants (Basel). 2021 Jan 12;10(1):139. doi: 10.3390/plants10010139. PMID: 33445460 |
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2 |
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3 |
Bi H, et al. Front Plant Sci. 2017 Sep 27;8:1689. doi: 10.3389/fpls.2017.01689. eCollection 2017. PMID: 29021807 |
4 |
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5 |
Virus Incidence of Sweet Potato in Korea from 2011 to 2014. Kim J, et al. Plant Pathol J. 2017 Oct;33(5):467-477. doi: 10.5423/PPJ.OA.08.2016.0167. Epub 2017 Oct 1. PMID: 29018310 |
6 |
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7 |
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8 |
Prasanth G, et al. Plant Dis. 2008 Feb;92(2):311. doi: 10.1094/PDIS-92-2-0311B. PMID: 30769415 |
9 |
First Report of Sweet potato leaf curl virus in China. Luan YS, et al. Plant Dis. 2006 Aug;90(8):1111. doi: 10.1094/PD-90-1111C. PMID: 30781325 |
10 |
Zhang SC, et al. Arch Virol. 2011 Jun;156(6):955-68. doi: 10.1007/s00705-011-0930-2. Epub 2011 Feb 8. PMID: 21302123 |