Sweet potato leaf curl Sichuan virus 2


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000912175.1
Isolate China
Release date 2015/2/22
Submitter Liu,Q.L., Zhang,Z.C., Qiao,Q., Qin,Y.H., Zhang,D.S., Tian,Y.T., Wang,S., Wang,Y.J.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_022586
ACCGGTGCCCGCGCCCCTTTTATTGTGGACCCCACACGCTTTGCTTTAATTATTTAAAGGAGTTTCTGTTGAATACTTTGTCGCCAAGAATGGAGTTGTGGGACCCACTCCAGAACCCTCTCCCAGATACTTTATACGGTTTCCGGTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATTTTCAGGGTCAGGCAGTATGACCGGGCGAATTCCCGTTTCGCGGAGATTTCATCCATATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTACGGATGAAGAGAAAGAGGGGTGATCGCATTCCGAAGGGATGCGTTGGACCCTGTAAGGTACAGGACTACGAATTCAAGATGGATGTCCCACACAGTGGGACCTTTGTCTGTGTCTCTGATTTTACTAGGGGTACTGGGCTTACCCATCGTTTGGGTAAGAGGGTGTGCATTAAGTCCATGGGCATTGATGGTAAGGTCTGGATGGATGACAATGTCGCCAAAAGAGACCACACCAACATCATCACTTACTGGTTGATCCGTGATAGAAGGCCCAATAAGGACCCATTAACATTTAGTCAGGCCTTTACTATGTATGATAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAGGTCTTGAAGAAGTTTTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAGCAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTACAACCACAAGGAAGAAGCTAAGTATGAGAATCAATTAGAGAATGCACTTATGCTGTATAGTGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACCCTGCGTTGCAGGGTTTATTTCTATGATTCGCACAATAATTAATAAAATTGTTCTTTCATTAATATAGTAGTGTTTTTACATCATCTTTGCAGTCAATTACATCTACTTCTTCTACCCACAAGAACTTGTGAGGTAAATTCCTAATTACATAAACTAAGTTATACAATGAAAAATAACCTAAACTACTTAATTCATTACAAATACACCATTTAAGGCGTGTCAAAATACCAGTCCAACTGTGAATAGCACCAGTCAGACGGGTTGAAATTATCCTGAACTGCAGGAATATCTTGTGGAAGCCCAGTTGCTTCCTCTCGCGGTGGTTCACTTGCAGTTGGAACTTCAGGATTGTTTTCCCCGCTTCGCTCCGGTGGGCGTATAAACACTTGAGGAAAAACGGTGCAGTCCGACCAATTGACATGGGGTTGTCGAAGAATTCGACTGCTCTCGTAGTCTGTGCATGACTTAGTAATTCCCCAGTGCGTGAATCCATTCTGGTACTTGCACTGAGGTGTGATGAAAGCTGAACAGCCGCACTGCTTCCACACTATCCTGGTCCTTTGCTCTGGTATGCGGCGTTTTTTTTTAGCCGCTGCGTGAATTGGCTCCTGAATTGGCGCCTTCCTCTTGTCTCCAGAATGGGCTTCTGACATTACAGAATACTGCGTTCTTACAAGCCCACTGCCTCAGTGCGTCTTGTTCTGTCTTATCTAGCCAGGATTTAAATGATGATCCTTCGCCTGGATTGCAAAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCTTCTGGGCCCCAATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTCGACGTCATCAATGACGTTGTACCAAGCACTATTACTGTACACTCTTGGATTCAGGTCCAAGTGCCCACATAGATAATTATGTGGACCTAAAGACCGAGCCCAAACTGTTTTACCTATCCTACTTGGCCCTTCTATTACAATACTAATGGGCCTATCCGGCCGCGCAGCGGCATCCTTGATGTTATCAGCAGCCCAATTGCTGATAATATCAGGTACATTATTAAAAGAAGAAGATAAAAACGGAGAAGTATAAACTTCTACAGGAGGAGAAAAAATTCTATCTAAATTATTATTAATATTATGGAATTGTAGAACAAAATCTTTTGGGCACAATTCCTTAATAATTTGTAAGGCTTCAGCCTTATTCCCAGCATTTAATGCCTGAGCGTAGGCTTCATTAGCCGTCTGTTGACCGCCTCTAGCAGATCTGCCGTCGATCTGGAACTCACCCCAGGTGAGTGTATCCCCGTCCTTCTCGACGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGGATGTTGGGGTGAAAATGGGCTGACCTTGTTGGGGACACGAGGTCGAAGAATCTTTGATTCGTGCACCTGAATTTCCCCTCGAACTGCACAAGCATGTGGAGGTGAGGTTCCCCATTCTCGTGTAACTCTCTGGCTATATGGATATATTTTTTATTTGTGGGGGTTTGGATATTTAATAATTGCTGTAATGCCTCCTCCTTAGAGAGAGAACATCGGGGATAGGTGAGAAAATAGTTTTTAGAGTTAATCTGGAACTTCTTTGGAGCTGCCATCTGTATTGGTACCCTCTAAAAACCTATGGGTATCGGTACATTGGTACCCATTTATACTTGGGTACCAAATGGCATAATGGTAATTTGATTAACTTTAATTTGAAATTCGAAATCCTATTGGTCCGCCAATAAAGCGGGCACCGTTTAATATT

Gene Information

NCBI Accession YP_008691084.1
Location 90-431
Protein Name AV2
Coding Region ATGGAGTTGTGGGACCCACTCCAGAACCCTCTCCCAGATACTTTATACGGTTTCCGGTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATTTTCAGGGTCAGGCAGTATGACCGGGCGAATTCCCGTTTCGCGGAGATTTCATCCATATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTACGGATGAAGAGAAAGAGGGGTGA
Protein Sequence MELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSIWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRTDEEKEG

NCBI Accession YP_008691085.1
Location 256-1020
Protein Name AV1
Coding Region ATGACCGGGCGAATTCCCGTTTCGCGGAGATTTCATCCATATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTACGGATGAAGAGAAAGAGGGGTGATCGCATTCCGAAGGGATGCGTTGGACCCTGTAAGGTACAGGACTACGAATTCAAGATGGATGTCCCACACAGTGGGACCTTTGTCTGTGTCTCTGATTTTACTAGGGGTACTGGGCTTACCCATCGTTTGGGTAAGAGGGTGTGCATTAAGTCCATGGGCATTGATGGTAAGGTCTGGATGGATGACAATGTCGCCAAAAGAGACCACACCAACATCATCACTTACTGGTTGATCCGTGATAGAAGGCCCAATAAGGACCCATTAACATTTAGTCAGGCCTTTACTATGTATGATAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAGGTCTTGAAGAAGTTTTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAGCAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTACAACCACAAGGAAGAAGCTAAGTATGAGAATCAATTAGAGAATGCACTTATGCTGTATAGTGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACCCTGCGTTGCAGGGTTTATTTCTATGATTCGCACAATAATTAA
Protein Sequence MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLENALMLYSASSHASNPVYQTLRCRVYFYDSHNN

NCBI Accession YP_008691086.1
Location 1037-1471
Protein Name AC3
Coding Region ATGGATTCACGCACTGGGGAATTACTAAGTCATGCACAGACTACGAGAGCAGTCGAATTCTTCGACAACCCCATGTCAATTGGTCGGACTGCACCGTTTTTCCTCAAGTGTTTATACGCCCACCGGAGCGAAGCGGGGAAAACAATCCTGAAGTTCCAACTGCAAGTGAACCACCGCGAGAGGAAGCAACTGGGCTTCCACAAGATATTCCTGCAGTTCAGGATAATTTCAACCCGTCTGACTGGTGCTATTCACAGTTGGACTGGTATTTTGACACGCCTTAAATGGTGTATTTGTAATGAATTAAGTAGTTTAGGTTATTTTTCATTGTATAACTTAGTTTATGTAATTAGGAATTTACCTCACAAGTTCTTGTGGGTAGAAGAAGTAGATGTAATTGACTGCAAAGATGATGTAAAAACACTACTATATTAA
Protein Sequence MDSRTGELLSHAQTTRAVEFFDNPMSIGRTAPFFLKCLYAHRSEAGKTILKFQLQVNHRERKQLGFHKIFLQFRIISTRLTGAIHSWTGILTRLKWCICNELSSLGYFSLYNLVYVIRNLPHKFLWVEEVDVIDCKDDVKTLLY

NCBI Accession YP_008691087.1
Location 1188-1631
Protein Name AC2
Coding Region ATGTCAGAAGCCCATTCTGGAGACAAGAGGAAGGCGCCAATTCAGGAGCCAATTCACGCAGCGGCTAAAAAAAAACGCCGCATACCAGAGCAAAGGACCAGGATAGTGTGGAAGCAGTGCGGCTGTTCAGCTTTCATCACACCTCAGTGCAAGTACCAGAATGGATTCACGCACTGGGGAATTACTAAGTCATGCACAGACTACGAGAGCAGTCGAATTCTTCGACAACCCCATGTCAATTGGTCGGACTGCACCGTTTTTCCTCAAGTGTTTATACGCCCACCGGAGCGAAGCGGGGAAAACAATCCTGAAGTTCCAACTGCAAGTGAACCACCGCGAGAGGAAGCAACTGGGCTTCCACAAGATATTCCTGCAGTTCAGGATAATTTCAACCCGTCTGACTGGTGCTATTCACAGTTGGACTGGTATTTTGACACGCCTTAA
Protein Sequence MSEAHSGDKRKAPIQEPIHAAAKKKRRIPEQRTRIVWKQCGCSAFITPQCKYQNGFTHWGITKSCTDYESSRILRQPHVNWSDCTVFPQVFIRPPERSGENNPEVPTASEPPREEATGLPQDIPAVQDNFNPSDWCYSQLDWYFDTP

NCBI Accession YP_008691088.1
Location 1564-2634
Protein Name AC1
Coding Region ATGGCAGCTCCAAAGAAGTTCCAGATTAACTCTAAAAACTATTTTCTCACCTATCCCCGATGTTCTCTCTCTAAGGAGGAGGCATTACAGCAATTATTAAATATCCAAACCCCCACAAATAAAAAATATATCCATATAGCCAGAGAGTTACACGAGAATGGGGAACCTCACCTCCACATGCTTGTGCAGTTCGAGGGGAAATTCAGGTGCACGAATCAAAGATTCTTCGACCTCGTGTCCCCAACAAGGTCAGCCCATTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACGTCGAGAAGGACGGGGATACACTCACCTGGGGTGAGTTCCAGATCGACGGCAGATCTGCTAGAGGCGGTCAACAGACGGCTAATGAAGCCTACGCTCAGGCATTAAATGCTGGGAATAAGGCTGAAGCCTTACAAATTATTAAGGAATTGTGCCCAAAAGATTTTGTTCTACAATTCCATAATATTAATAATAATTTAGATAGAATTTTTTCTCCTCCTGTAGAAGTTTATACTTCTCCGTTTTTATCTTCTTCTTTTAATAATGTACCTGATATTATCAGCAATTGGGCTGCTGATAACATCAAGGATGCCGCTGCGCGGCCGGATAGGCCCATTAGTATTGTAATAGAAGGGCCAAGTAGGATAGGTAAAACAGTTTGGGCTCGGTCTTTAGGTCCACATAATTATCTATGTGGGCACTTGGACCTGAATCCAAGAGTGTACAGTAATAGTGCTTGGTACAACGTCATTGATGACGTCGACCCCCAATACCTAAAGCACTTTAAGGAATTCATTGGGGCCCAGAAGGACTGGCAATCCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTTTGCAATCCAGGCGAAGGATCATCATTTAAATCCTGGCTAGATAAGACAGAACAAGACGCACTGAGGCAGTGGGCTTGTAAGAACGCAGTATTCTGTAATGTCAGAAGCCCATTCTGGAGACAAGAGGAAGGCGCCAATTCAGGAGCCAATTCACGCAGCGGCTAA
Protein Sequence MAAPKKFQINSKNYFLTYPRCSLSKEEALQQLLNIQTPTNKKYIHIARELHENGEPHLHMLVQFEGKFRCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYVEKDGDTLTWGEFQIDGRSARGGQQTANEAYAQALNAGNKAEALQIIKELCPKDFVLQFHNINNNLDRIFSPPVEVYTSPFLSSSFNNVPDIISNWAADNIKDAAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLNPRVYSNSAWYNVIDDVDPQYLKHFKEFIGAQKDWQSNTKYGKPVQIKGGIPTIFLCNPGEGSSFKSWLDKTEQDALRQWACKNAVFCNVRSPFWRQEEGANSGANSRSG

NCBI Accession YP_008691089.1
Location 2220-2477
Protein Name AC4
Coding Region ATGGGGAACCTCACCTCCACATGCTTGTGCAGTTCGAGGGGAAATTCAGGTGCACGAATCAAAGATTCTTCGACCTCGTGTCCCCAACAAGGTCAGCCCATTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACGTCGAGAAGGACGGGGATACACTCACCTGGGGTGAGTTCCAGATCGACGGCAGATCTGCTAGAGGCGGTCAACAGACGGCTAATGAAGCCTACGCTCAGGCATTAA
Protein Sequence MGNLTSTCLCSSRGNSGARIKDSSTSCPQQGQPIFTPTSRELNPAPTSSPTSRRTGIHSPGVSSRSTADLLEAVNRRLMKPTLRH

References More References in PubMed

1

Diversity of Sweepoviruses Infecting Sweet Potato in China.

Liu Q, et al.  Plant Dis. 2017 Dec;101(12):2098-2103. doi: 10.1094/PDIS-04-17-0524-RE. Epub 2017 Oct 9.

PMID: 30677378

2

Complete genome sequence of a novel monopartite begomovirus infecting sweet potato in China.

Liu Q, et al.  Virus Genes. 2013 Dec;47(3):591-4. doi: 10.1007/s11262-013-0982-3. Epub 2013 Sep 22.

PMID: 24057883