Sweet potato leaf curl Sao Paulo virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000927695.1 |
| Isolate |
Brazil: Sao Paulo |
| Release date |
2015/2/22 |
| Submitter |
Albuquerque,L.C., Inoue-Nagata,A.K., Pinheiro,B., Resende,R.O., Moriones,E., Navas-Castillo,J., Ribeiro,S.D., Ribeiro,S.G. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGTGCCCGCGTTCGTTTTATGGTGGGCCCCACACGGCATCTTTAATCATTAAAAGGCGCGTCAATTACGAGACTTTGTCGCCAAGTATGGATTTGTGGGATCCTTTGCAGAACCCATTACCTGAGACTTTATACGGTCTACGGTGTATGCTTTCTGTGAAATACCTGCAGAGTATTTCGGCGAAATACGAGCCTGGAACCCTAGGGTTCGAGCTTTGCTCCGATTTAATCCGCATTTTGCGGGTTCGTCACTATGACAGGGCGAATGCGCGTTACGCGGAGATTTCATCCGTATGGGGGGACACCGGCAAGACGGAGACTGAACTTCGAGACCGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAAGCGTACGGATGAAGAGAAAGAAGGGGGATCGAATCCCTAAGGGGTGTGTGGGTCCCTGTAAGGTACAGGATTACGAGTTCAAGATGGATGTCCCGCATAGTGGTACGTTTGTTTGTGTCTCAGATTTTACTCGTGGTACTGGGCTTACCCACCGATTAGGTAAGAAGGTGTGTATTAAGTCCATGGGTATTGACGGTAAGGTCTGGATGGACGACAACGTCGCCAAGAGGGACCATACCAACATCATTACTTACTGGTTGATTCGAGATAGGAGGCCCAATAAGGACCCTCTGACGTTTGTACAGGCCTTTACCATGTATGATAACGAACCCACTACTGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAAGTGTTGAAGAAATTTTCTGTTACTGTATCTGGTGGTCCTTACAATCACAAGGAGCAGGCTTTGGTTAGGAAGTTTTTTAATGGATTATACCATCATGTTACCTATAATCACAAGGAAGAAGCTAAGTACGAAAACCATTTGGAAAATGCTTTGATGTTGTATTCAGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACTCTGCGTTGCAGGGCTTATTTCTATGATTCGCATAATAATTAATAAAGAAGTAGTTTTATATCATCTTCGCAATCTATTACATCCACTTCTTCTACCCACAAACATTCTTGTGGTAAATGTCTAATTACATAAACTAAATTCAACAATGAAAAATAACCTAAACTAACTAAGCTATTACAAATTCGCCATTTAAGGCGTGTCAAAATACCAGTCCAACTGTGAATAACACCAGTCAGACGCGTTGTTATGATTCGGAACTGGAGAAATATCTTTTGGAATCCAATTTCCCTCCTGTTCCTGTGGTTGACTTGAAGCTGGAACTTCATGATCTTCTTTGTGTTTATGTTGTTTGTATGTACATACAGCAACCGCAGGTGGAACGGAGCAGTCTGACCCACAGACATGGGGTTGGTGAAGAATTCTGCTGCTCTCGTAATCTGTGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCACTCGTTGGTTATGAACGCTGAGCAGCCGCAACCTTTCCACACTATCCTGGTCCTTGGTTCAGGAGCTTTCCTCTGCTTCTTCTTGGCCGCCTCGTGAATTGGCTCCTGTTGGGGACACTTCCTCTTGTATCCAGAAGGGGGTGTCGACATCACAGAAAACTGCGTTCTTTACCGCCCAAATTTTAAGTGCTTCTTGCTCTGGCTTGTCCAGCCAGAATTTAAATGAAGACCCTTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTGCTTTGCCAGTCCTTCTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTATACACTTTGGGACTCAAGTCCAGGTGTCCACACAAATAATTATGAGGACCTAACGACCGAGCCCATACTGTTTTTCCTATTCTACTTGGGCCTTCTATAACAATACTAATGGGCCTATCCGGCCGCGCAGCGGAATCCATGACATTCTCAGCAGCCCAGTCGCTGATAATGTCAGGTACATTATTGAAAGAAGAAGAAGAAAAAGGGGAAGAATACACAGAAGGAGGAGGAGAAAAAATCCTATCTAAATTTGAAACTAAATTATGATATTGAAATATAAATTTTTCAGGAAGTTTTTCCCTGATTATTTGTAACGCAGCTTCTTTATTGCCTGCATTTAGGGCCTCTGCTGCTGCGTCATTAGCAGTCTGCTGGCCTCCTCTAGCAGATCTGCCGTCGACCTGGAATTCTCCCCATTCCAAAGTGTCTCCATCCTTATCGACGTAGGACTTGACGTCGGAGCTGGATTTCGCTCTCTGAATGTTTGGGTGGAAATGTGCTGACCGGGTTGGAGAGACCAAGTCGAAGAATCTTTGATTCGTGCACTGGTAATTCCCCTCGAACTGGAGAAGCACATGGAGATGAGGTTGCCCATCTTCATGCAGTTCTCTGCATATCTTAATATATTTTTTATTTGTAGGGGTTTGGAGTTGAAGAAGCTGCTGAAGAGTTTCTTCTTTGGATAGAGAACATTGGGGATAAGTGAGAAAATAGTTTTTTGCTTTGATATTAAAACGCCCGGCTCTTGGCATTTTGACTAAGTCAAATGGTGGACACAAAAACTCTATATGAATTGGTGGAACGGTGGACAATTTATATGTGTCCACCAAATGGCAAATTGGTAATTTAGGTAACTTTAATTTGAATGGTAAGATCCTATTGGTCCTCCATAAAGCGGGCACCGTATTAATATT
Gene Information
|
NCBI Accession
|
YP_009109609.1
|
|
Location
|
90-443 |
|
Protein Name
|
V2 |
|
Coding Region
|
ATGGATTTGTGGGATCCTTTGCAGAACCCATTACCTGAGACTTTATACGGTCTACGGTGTATGCTTTCTGTGAAATACCTGCAGAGTATTTCGGCGAAATACGAGCCTGGAACCCTAGGGTTCGAGCTTTGCTCCGATTTAATCCGCATTTTGCGGGTTCGTCACTATGACAGGGCGAATGCGCGTTACGCGGAGATTTCATCCGTATGGGGGGACACCGGCAAGACGGAGACTGAACTTCGAGACCGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAAGCGTACGGATGAAGAGAAAGAAGGGGGATCGAATCCCTAA |
|
Protein Sequence
|
MDLWDPLQNPLPETLYGLRCMLSVKYLQSISAKYEPGTLGFELCSDLIRILRVRHYDRANARYAEISSVWGDTGKTETELRDRYRALHWECCPNCCPKLCPGFKKRTDEEKEGGSNP |
|
NCBI Accession
|
YP_009109610.1
|
|
Location
|
256-1020 |
|
Protein Name
|
V1 |
|
Coding Region
|
ATGACAGGGCGAATGCGCGTTACGCGGAGATTTCATCCGTATGGGGGGACACCGGCAAGACGGAGACTGAACTTCGAGACCGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAAGCGTACGGATGAAGAGAAAGAAGGGGGATCGAATCCCTAAGGGGTGTGTGGGTCCCTGTAAGGTACAGGATTACGAGTTCAAGATGGATGTCCCGCATAGTGGTACGTTTGTTTGTGTCTCAGATTTTACTCGTGGTACTGGGCTTACCCACCGATTAGGTAAGAAGGTGTGTATTAAGTCCATGGGTATTGACGGTAAGGTCTGGATGGACGACAACGTCGCCAAGAGGGACCATACCAACATCATTACTTACTGGTTGATTCGAGATAGGAGGCCCAATAAGGACCCTCTGACGTTTGTACAGGCCTTTACCATGTATGATAACGAACCCACTACTGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAAGTGTTGAAGAAATTTTCTGTTACTGTATCTGGTGGTCCTTACAATCACAAGGAGCAGGCTTTGGTTAGGAAGTTTTTTAATGGATTATACCATCATGTTACCTATAATCACAAGGAAGAAGCTAAGTACGAAAACCATTTGGAAAATGCTTTGATGTTGTATTCAGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACTCTGCGTTGCAGGGCTTATTTCTATGATTCGCATAATAATTAA |
|
Protein Sequence
|
MTGRMRVTRRFHPYGGTPARRRLNFETAIVPYTGNAVPIAARSYVPVSRSVRMKRKKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKKVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFVQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFNGLYHHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN |
|
NCBI Accession
|
YP_009109611.1
|
|
Location
|
1017-1454 |
|
Protein Name
|
C3 |
|
Coding Region
|
ATGGATTCACGCACAGGGGAATCACTAAGTCATGCACAGATTACGAGAGCAGCAGAATTCTTCACCAACCCCATGTCTGTGGGTCAGACTGCTCCGTTCCACCTGCGGTTGCTGTATGTACATACAAACAACATAAACACAAAGAAGATCATGAAGTTCCAGCTTCAAGTCAACCACAGGAACAGGAGGGAAATTGGATTCCAAAAGATATTTCTCCAGTTCCGAATCATAACAACGCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAAATGGCGAATTTGTAATAGCTTAGTTAGTTTAGGTTATTTTTCATTGTTGAATTTAGTTTATGTAATTAGACATTTACCACAAGAATGTTTGTGGGTAGAAGAAGTGGATGTAATAGATTGCGAAGATGATATAAAACTACTTCTTTATTAA |
|
Protein Sequence
|
MDSRTGESLSHAQITRAAEFFTNPMSVGQTAPFHLRLLYVHTNNINTKKIMKFQLQVNHRNRREIGFQKIFLQFRIITTRLTGVIHSWTGILTRLKWRICNSLVSLGYFSLLNLVYVIRHLPQECLWVEEVDVIDCEDDIKLLLY |
|
NCBI Accession
|
YP_009109612.1
|
|
Location
|
1168-1617 |
|
Protein Name
|
C2 |
|
Coding Region
|
ATGTCGACACCCCCTTCTGGATACAAGAGGAAGTGTCCCCAACAGGAGCCAATTCACGAGGCGGCCAAGAAGAAGCAGAGGAAAGCTCCTGAACCAAGGACCAGGATAGTGTGGAAAGGTTGCGGCTGCTCAGCGTTCATAACCAACGAGTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCACAGATTACGAGAGCAGCAGAATTCTTCACCAACCCCATGTCTGTGGGTCAGACTGCTCCGTTCCACCTGCGGTTGCTGTATGTACATACAAACAACATAAACACAAAGAAGATCATGAAGTTCCAGCTTCAAGTCAACCACAGGAACAGGAGGGAAATTGGATTCCAAAAGATATTTCTCCAGTTCCGAATCATAACAACGCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAA |
|
Protein Sequence
|
MSTPPSGYKRKCPQQEPIHEAAKKKQRKAPEPRTRIVWKGCGCSAFITNECKYQHGFTHRGITKSCTDYESSRILHQPHVCGSDCSVPPAVAVCTYKQHKHKEDHEVPASSQPQEQEGNWIPKDISPVPNHNNASDWCYSQLDWYFDTP |
|
NCBI Accession
|
YP_009109613.1
|
|
Location
|
1526-2620 |
|
Protein Name
|
C1 |
|
Coding Region
|
ATGCCAAGAGCCGGGCGTTTTAATATCAAAGCAAAAAACTATTTTCTCACTTATCCCCAATGTTCTCTATCCAAAGAAGAAACTCTTCAGCAGCTTCTTCAACTCCAAACCCCTACAAATAAAAAATATATTAAGATATGCAGAGAACTGCATGAAGATGGGCAACCTCATCTCCATGTGCTTCTCCAGTTCGAGGGGAATTACCAGTGCACGAATCAAAGATTCTTCGACTTGGTCTCTCCAACCCGGTCAGCACATTTCCACCCAAACATTCAGAGAGCGAAATCCAGCTCCGACGTCAAGTCCTACGTCGATAAGGATGGAGACACTTTGGAATGGGGAGAATTCCAGGTCGACGGCAGATCTGCTAGAGGAGGCCAGCAGACTGCTAATGACGCAGCAGCAGAGGCCCTAAATGCAGGCAATAAAGAAGCTGCGTTACAAATAATCAGGGAAAAACTTCCTGAAAAATTTATATTTCAATATCATAATTTAGTTTCAAATTTAGATAGGATTTTTTCTCCTCCTCCTTCTGTGTATTCTTCCCCTTTTTCTTCTTCTTCTTTCAATAATGTACCTGACATTATCAGCGACTGGGCTGCTGAGAATGTCATGGATTCCGCTGCGCGGCCGGATAGGCCCATTAGTATTGTTATAGAAGGCCCAAGTAGAATAGGAAAAACAGTATGGGCTCGGTCGTTAGGTCCTCATAATTATTTGTGTGGACACCTGGACTTGAGTCCCAAAGTGTATAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAGAAGGACTGGCAAAGCAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAAGGGTCTTCATTTAAATTCTGGCTGGACAAGCCAGAGCAAGAAGCACTTAAAATTTGGGCGGTAAAGAACGCAGTTTTCTGTGATGTCGACACCCCCTTCTGGATACAAGAGGAAGTGTCCCCAACAGGAGCCAATTCACGAGGCGGCCAAGAAGAAGCAGAGGAAAGCTCCTGA |
|
Protein Sequence
|
MPRAGRFNIKAKNYFLTYPQCSLSKEETLQQLLQLQTPTNKKYIKICRELHEDGQPHLHVLLQFEGNYQCTNQRFFDLVSPTRSAHFHPNIQRAKSSSDVKSYVDKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGNKEAALQIIREKLPEKFIFQYHNLVSNLDRIFSPPPSVYSSPFSSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKFWLDKPEQEALKIWAVKNAVFCDVDTPFWIQEEVSPTGANSRGGQEEAEESS |
|
NCBI Accession
|
YP_009109614.1
|
|
Location
|
2206-2469 |
|
Protein Name
|
C4 |
|
Coding Region
|
ATGAAGATGGGCAACCTCATCTCCATGTGCTTCTCCAGTTCGAGGGGAATTACCAGTGCACGAATCAAAGATTCTTCGACTTGGTCTCTCCAACCCGGTCAGCACATTTCCACCCAAACATTCAGAGAGCGAAATCCAGCTCCGACGTCAAGTCCTACGTCGATAAGGATGGAGACACTTTGGAATGGGGAGAATTCCAGGTCGACGGCAGATCTGCTAGAGGAGGCCAGCAGACTGCTAATGACGCAGCAGCAGAGGCCCTAA |
|
Protein Sequence
|
MKMGNLISMCFSSSRGITSARIKDSSTWSLQPGQHISTQTFRERNPAPTSSPTSIRMETLWNGENSRSTADLLEEASRLLMTQQQRP |