Sweet potato leaf curl Sao Paulo virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000927695.1
Isolate Brazil: Sao Paulo
Release date 2015/2/22
Submitter Albuquerque,L.C., Inoue-Nagata,A.K., Pinheiro,B., Resende,R.O., Moriones,E., Navas-Castillo,J., Ribeiro,S.D., Ribeiro,S.G.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_025681
ACCGGTGCCCGCGTTCGTTTTATGGTGGGCCCCACACGGCATCTTTAATCATTAAAAGGCGCGTCAATTACGAGACTTTGTCGCCAAGTATGGATTTGTGGGATCCTTTGCAGAACCCATTACCTGAGACTTTATACGGTCTACGGTGTATGCTTTCTGTGAAATACCTGCAGAGTATTTCGGCGAAATACGAGCCTGGAACCCTAGGGTTCGAGCTTTGCTCCGATTTAATCCGCATTTTGCGGGTTCGTCACTATGACAGGGCGAATGCGCGTTACGCGGAGATTTCATCCGTATGGGGGGACACCGGCAAGACGGAGACTGAACTTCGAGACCGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAAGCGTACGGATGAAGAGAAAGAAGGGGGATCGAATCCCTAAGGGGTGTGTGGGTCCCTGTAAGGTACAGGATTACGAGTTCAAGATGGATGTCCCGCATAGTGGTACGTTTGTTTGTGTCTCAGATTTTACTCGTGGTACTGGGCTTACCCACCGATTAGGTAAGAAGGTGTGTATTAAGTCCATGGGTATTGACGGTAAGGTCTGGATGGACGACAACGTCGCCAAGAGGGACCATACCAACATCATTACTTACTGGTTGATTCGAGATAGGAGGCCCAATAAGGACCCTCTGACGTTTGTACAGGCCTTTACCATGTATGATAACGAACCCACTACTGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAAGTGTTGAAGAAATTTTCTGTTACTGTATCTGGTGGTCCTTACAATCACAAGGAGCAGGCTTTGGTTAGGAAGTTTTTTAATGGATTATACCATCATGTTACCTATAATCACAAGGAAGAAGCTAAGTACGAAAACCATTTGGAAAATGCTTTGATGTTGTATTCAGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACTCTGCGTTGCAGGGCTTATTTCTATGATTCGCATAATAATTAATAAAGAAGTAGTTTTATATCATCTTCGCAATCTATTACATCCACTTCTTCTACCCACAAACATTCTTGTGGTAAATGTCTAATTACATAAACTAAATTCAACAATGAAAAATAACCTAAACTAACTAAGCTATTACAAATTCGCCATTTAAGGCGTGTCAAAATACCAGTCCAACTGTGAATAACACCAGTCAGACGCGTTGTTATGATTCGGAACTGGAGAAATATCTTTTGGAATCCAATTTCCCTCCTGTTCCTGTGGTTGACTTGAAGCTGGAACTTCATGATCTTCTTTGTGTTTATGTTGTTTGTATGTACATACAGCAACCGCAGGTGGAACGGAGCAGTCTGACCCACAGACATGGGGTTGGTGAAGAATTCTGCTGCTCTCGTAATCTGTGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCACTCGTTGGTTATGAACGCTGAGCAGCCGCAACCTTTCCACACTATCCTGGTCCTTGGTTCAGGAGCTTTCCTCTGCTTCTTCTTGGCCGCCTCGTGAATTGGCTCCTGTTGGGGACACTTCCTCTTGTATCCAGAAGGGGGTGTCGACATCACAGAAAACTGCGTTCTTTACCGCCCAAATTTTAAGTGCTTCTTGCTCTGGCTTGTCCAGCCAGAATTTAAATGAAGACCCTTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTGCTTTGCCAGTCCTTCTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTATACACTTTGGGACTCAAGTCCAGGTGTCCACACAAATAATTATGAGGACCTAACGACCGAGCCCATACTGTTTTTCCTATTCTACTTGGGCCTTCTATAACAATACTAATGGGCCTATCCGGCCGCGCAGCGGAATCCATGACATTCTCAGCAGCCCAGTCGCTGATAATGTCAGGTACATTATTGAAAGAAGAAGAAGAAAAAGGGGAAGAATACACAGAAGGAGGAGGAGAAAAAATCCTATCTAAATTTGAAACTAAATTATGATATTGAAATATAAATTTTTCAGGAAGTTTTTCCCTGATTATTTGTAACGCAGCTTCTTTATTGCCTGCATTTAGGGCCTCTGCTGCTGCGTCATTAGCAGTCTGCTGGCCTCCTCTAGCAGATCTGCCGTCGACCTGGAATTCTCCCCATTCCAAAGTGTCTCCATCCTTATCGACGTAGGACTTGACGTCGGAGCTGGATTTCGCTCTCTGAATGTTTGGGTGGAAATGTGCTGACCGGGTTGGAGAGACCAAGTCGAAGAATCTTTGATTCGTGCACTGGTAATTCCCCTCGAACTGGAGAAGCACATGGAGATGAGGTTGCCCATCTTCATGCAGTTCTCTGCATATCTTAATATATTTTTTATTTGTAGGGGTTTGGAGTTGAAGAAGCTGCTGAAGAGTTTCTTCTTTGGATAGAGAACATTGGGGATAAGTGAGAAAATAGTTTTTTGCTTTGATATTAAAACGCCCGGCTCTTGGCATTTTGACTAAGTCAAATGGTGGACACAAAAACTCTATATGAATTGGTGGAACGGTGGACAATTTATATGTGTCCACCAAATGGCAAATTGGTAATTTAGGTAACTTTAATTTGAATGGTAAGATCCTATTGGTCCTCCATAAAGCGGGCACCGTATTAATATT

Gene Information

NCBI Accession YP_009109609.1
Location 90-443
Protein Name V2
Coding Region ATGGATTTGTGGGATCCTTTGCAGAACCCATTACCTGAGACTTTATACGGTCTACGGTGTATGCTTTCTGTGAAATACCTGCAGAGTATTTCGGCGAAATACGAGCCTGGAACCCTAGGGTTCGAGCTTTGCTCCGATTTAATCCGCATTTTGCGGGTTCGTCACTATGACAGGGCGAATGCGCGTTACGCGGAGATTTCATCCGTATGGGGGGACACCGGCAAGACGGAGACTGAACTTCGAGACCGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAAGCGTACGGATGAAGAGAAAGAAGGGGGATCGAATCCCTAA
Protein Sequence MDLWDPLQNPLPETLYGLRCMLSVKYLQSISAKYEPGTLGFELCSDLIRILRVRHYDRANARYAEISSVWGDTGKTETELRDRYRALHWECCPNCCPKLCPGFKKRTDEEKEGGSNP

NCBI Accession YP_009109610.1
Location 256-1020
Protein Name V1
Coding Region ATGACAGGGCGAATGCGCGTTACGCGGAGATTTCATCCGTATGGGGGGACACCGGCAAGACGGAGACTGAACTTCGAGACCGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAAGCGTACGGATGAAGAGAAAGAAGGGGGATCGAATCCCTAAGGGGTGTGTGGGTCCCTGTAAGGTACAGGATTACGAGTTCAAGATGGATGTCCCGCATAGTGGTACGTTTGTTTGTGTCTCAGATTTTACTCGTGGTACTGGGCTTACCCACCGATTAGGTAAGAAGGTGTGTATTAAGTCCATGGGTATTGACGGTAAGGTCTGGATGGACGACAACGTCGCCAAGAGGGACCATACCAACATCATTACTTACTGGTTGATTCGAGATAGGAGGCCCAATAAGGACCCTCTGACGTTTGTACAGGCCTTTACCATGTATGATAACGAACCCACTACTGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAAGTGTTGAAGAAATTTTCTGTTACTGTATCTGGTGGTCCTTACAATCACAAGGAGCAGGCTTTGGTTAGGAAGTTTTTTAATGGATTATACCATCATGTTACCTATAATCACAAGGAAGAAGCTAAGTACGAAAACCATTTGGAAAATGCTTTGATGTTGTATTCAGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACTCTGCGTTGCAGGGCTTATTTCTATGATTCGCATAATAATTAA
Protein Sequence MTGRMRVTRRFHPYGGTPARRRLNFETAIVPYTGNAVPIAARSYVPVSRSVRMKRKKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKKVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFVQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFNGLYHHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN

NCBI Accession YP_009109611.1
Location 1017-1454
Protein Name C3
Coding Region ATGGATTCACGCACAGGGGAATCACTAAGTCATGCACAGATTACGAGAGCAGCAGAATTCTTCACCAACCCCATGTCTGTGGGTCAGACTGCTCCGTTCCACCTGCGGTTGCTGTATGTACATACAAACAACATAAACACAAAGAAGATCATGAAGTTCCAGCTTCAAGTCAACCACAGGAACAGGAGGGAAATTGGATTCCAAAAGATATTTCTCCAGTTCCGAATCATAACAACGCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAAATGGCGAATTTGTAATAGCTTAGTTAGTTTAGGTTATTTTTCATTGTTGAATTTAGTTTATGTAATTAGACATTTACCACAAGAATGTTTGTGGGTAGAAGAAGTGGATGTAATAGATTGCGAAGATGATATAAAACTACTTCTTTATTAA
Protein Sequence MDSRTGESLSHAQITRAAEFFTNPMSVGQTAPFHLRLLYVHTNNINTKKIMKFQLQVNHRNRREIGFQKIFLQFRIITTRLTGVIHSWTGILTRLKWRICNSLVSLGYFSLLNLVYVIRHLPQECLWVEEVDVIDCEDDIKLLLY

NCBI Accession YP_009109612.1
Location 1168-1617
Protein Name C2
Coding Region ATGTCGACACCCCCTTCTGGATACAAGAGGAAGTGTCCCCAACAGGAGCCAATTCACGAGGCGGCCAAGAAGAAGCAGAGGAAAGCTCCTGAACCAAGGACCAGGATAGTGTGGAAAGGTTGCGGCTGCTCAGCGTTCATAACCAACGAGTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCACAGATTACGAGAGCAGCAGAATTCTTCACCAACCCCATGTCTGTGGGTCAGACTGCTCCGTTCCACCTGCGGTTGCTGTATGTACATACAAACAACATAAACACAAAGAAGATCATGAAGTTCCAGCTTCAAGTCAACCACAGGAACAGGAGGGAAATTGGATTCCAAAAGATATTTCTCCAGTTCCGAATCATAACAACGCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAA
Protein Sequence MSTPPSGYKRKCPQQEPIHEAAKKKQRKAPEPRTRIVWKGCGCSAFITNECKYQHGFTHRGITKSCTDYESSRILHQPHVCGSDCSVPPAVAVCTYKQHKHKEDHEVPASSQPQEQEGNWIPKDISPVPNHNNASDWCYSQLDWYFDTP

NCBI Accession YP_009109613.1
Location 1526-2620
Protein Name C1
Coding Region ATGCCAAGAGCCGGGCGTTTTAATATCAAAGCAAAAAACTATTTTCTCACTTATCCCCAATGTTCTCTATCCAAAGAAGAAACTCTTCAGCAGCTTCTTCAACTCCAAACCCCTACAAATAAAAAATATATTAAGATATGCAGAGAACTGCATGAAGATGGGCAACCTCATCTCCATGTGCTTCTCCAGTTCGAGGGGAATTACCAGTGCACGAATCAAAGATTCTTCGACTTGGTCTCTCCAACCCGGTCAGCACATTTCCACCCAAACATTCAGAGAGCGAAATCCAGCTCCGACGTCAAGTCCTACGTCGATAAGGATGGAGACACTTTGGAATGGGGAGAATTCCAGGTCGACGGCAGATCTGCTAGAGGAGGCCAGCAGACTGCTAATGACGCAGCAGCAGAGGCCCTAAATGCAGGCAATAAAGAAGCTGCGTTACAAATAATCAGGGAAAAACTTCCTGAAAAATTTATATTTCAATATCATAATTTAGTTTCAAATTTAGATAGGATTTTTTCTCCTCCTCCTTCTGTGTATTCTTCCCCTTTTTCTTCTTCTTCTTTCAATAATGTACCTGACATTATCAGCGACTGGGCTGCTGAGAATGTCATGGATTCCGCTGCGCGGCCGGATAGGCCCATTAGTATTGTTATAGAAGGCCCAAGTAGAATAGGAAAAACAGTATGGGCTCGGTCGTTAGGTCCTCATAATTATTTGTGTGGACACCTGGACTTGAGTCCCAAAGTGTATAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAGAAGGACTGGCAAAGCAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAAGGGTCTTCATTTAAATTCTGGCTGGACAAGCCAGAGCAAGAAGCACTTAAAATTTGGGCGGTAAAGAACGCAGTTTTCTGTGATGTCGACACCCCCTTCTGGATACAAGAGGAAGTGTCCCCAACAGGAGCCAATTCACGAGGCGGCCAAGAAGAAGCAGAGGAAAGCTCCTGA
Protein Sequence MPRAGRFNIKAKNYFLTYPQCSLSKEETLQQLLQLQTPTNKKYIKICRELHEDGQPHLHVLLQFEGNYQCTNQRFFDLVSPTRSAHFHPNIQRAKSSSDVKSYVDKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGNKEAALQIIREKLPEKFIFQYHNLVSNLDRIFSPPPSVYSSPFSSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKFWLDKPEQEALKIWAVKNAVFCDVDTPFWIQEEVSPTGANSRGGQEEAEESS

NCBI Accession YP_009109614.1
Location 2206-2469
Protein Name C4
Coding Region ATGAAGATGGGCAACCTCATCTCCATGTGCTTCTCCAGTTCGAGGGGAATTACCAGTGCACGAATCAAAGATTCTTCGACTTGGTCTCTCCAACCCGGTCAGCACATTTCCACCCAAACATTCAGAGAGCGAAATCCAGCTCCGACGTCAAGTCCTACGTCGATAAGGATGGAGACACTTTGGAATGGGGAGAATTCCAGGTCGACGGCAGATCTGCTAGAGGAGGCCAGCAGACTGCTAATGACGCAGCAGCAGAGGCCCTAA
Protein Sequence MKMGNLISMCFSSSRGITSARIKDSSTWSLQPGQHISTQTFRERNPAPTSSPTSIRMETLWNGENSRSTADLLEEASRLLMTQQQRP

References More References in PubMed

1

A novel monopartite begomovirus infecting sweet potato in Brazil.

Albuquerque LC, et al.  Arch Virol. 2011 Jul;156(7):1291-4. doi: 10.1007/s00705-011-1016-x. Epub 2011 May 19.

PMID: 21594599

2

Genetic identification of two sweet-potato-infecting begomoviruses in South Africa.

Esterhuizen LL, et al.  Arch Virol. 2012 Nov;157(11):2241-5. doi: 10.1007/s00705-012-1398-4. Epub 2012 Jul 20.

PMID: 22814698