Sweet potato leaf curl Henan virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000907875.1
Isolate China: Henan
Release date 2015/2/22
Submitter Liu,Q., Zhang,Z., Li,J., Qiao,Q., Qin,Y., Zhang,D., Tian,Y., Wang,S., Wang,Y., Liu,Q.L., Zhang,Z.C., Qin,Y.H., Zhang,D.S., Tian,Y.T., Wang,Y.J.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_021719
ACCGGTGCCCGCGCCCCCCTTTATTGTGGGCCCCACACGCTTTACTTTAATTATTTAAAGGCGTACCTGTTTCAGTCTTGGTCGCCAAGAATGGATTTATGGGACCCACTTCAGAACCCTCTCCCAGATACTTTATACGGTTTTCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAACCAGGAACTCTAGGGTTCGAGCTTTGTTCCGATCTCATTCGCATACTGCGCGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAAGGTACAGGATTATGAATTCAAGATGGATGTCCCACATAGTGGCACCTTTGTGTGTGTTTCTGATTTTACAAGGGGTACTGGGCTTACACATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGACGACAACGTGGCCAAGAGGGACCATACAAACATCATTACTTACTGGTTGATCCGAGATAGAAGACCCAATAAGGATCCATTGACGTTTGCACAGGCCTTCACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTTCTGAAGAAATTCTCTGTTACTGTATCTGGTGGTCCTTATAACCACAAGGAGCAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAAGAGGCTAAATATGAGAATCATTTAGAGAATGCATTAATGTTGTATTCTGCTAGCAGCCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCATAATAATTAATAAAGAAGTACTTTTATATCATCTTTGCAATCTATTACATCGACTTCGTCTATCCATCTAACTGATTCAGGCAAATGCCTGATTACATAAACTAAATTAATAAGAGAAAAAAACCCTAAACTAGCTAAGCTATTACATATATGCCATTTAAGGCGTTGCAAAATACCAGTCCAATTGGGAATAGCACCAGTTAGACGGGTCGTCAAGATCCGGAATTGGAGGAAGATCTTGTGGAATCCCAGTTGTCTCCTTTCCCTGTAGTTGACCCTCAGCTGGAATTTGAGGATGGTTCTCCCCTGTGCGCTCTCGTGGACATACATCAGTCTGAGGTGGAATGGTGCAGTCCGACCCACAGACATGGGGTTGGTGTCGAATTCGACTGCTCTCGTAGTCTGAGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCAGGTTGTGGTGATGAAGGCTGAACAGCCGCAACCCTTCCACACTATCCTTGTCCTCTGTTCAGGAACTTTCCTCTTGGCCTTCTTCGCCTCTGTGTGTAGTGGCTCCTGAATGGGACACTTCCTCTTGTACCCAGAAAGGGGATTGGACATCGCAGAATAAAGCGTTTGCTGTTGCCCAAATCTTGAGTGCTCCCTGCTCTGGTTTGTCCAACCAGAGTTTAAATGACGAGCCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTGGATTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTATACTTTTGGACTTAAGTCTAAATGACCACACAGATAATTATGTGGTCCTAAAGATCTAGCCCAGACTGTTTTACCTATTCTACTTGGGCCTTCTATTACAATACTAATGGGCCTATCTGGCCGCGCAGCGGCATCCATGACATTTTCAGCAGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGAAGAAAGAGAAAAAGGAGAAGAATATACAGAAGGAGGAGGAGAAAAAATCCTATCTAAATTATTATTAATATTATGGAATTGAAGAACAAAGTCTTTTGGACACAATTCCTTTATTATCTGTAACGCTTCAGATTTACACCCAGTATTTAATGCCTGGGCGTAAGCATCGTTAGCCGTTTGCTGACCTCCTCTAGCACTTCTTCCGTCGACCTGGAAGACTCCACTGTCAACAAAATCTTGGTCCTTCTCAATGTAGGCCTTGACATCGGAAGAGGACTTTGCTGATTGGAAATTGGGGTGGTATTGTGTAGAGGAGTTGGGATGAGTAAGGTCGAAGTGCCTGGGGTTTGTGAATTGGCACTTACCTTTGAATTGGATGAGAGCATGGAGGTGCAGGCTCCCATCCTGGTGTTTCTCTTGAGCAACTCGGATAAATAATTTATCAGAAGGGCATTGAATGCCCTTTAATAGCTCAAGGACTGTGTCTTTAGATAGGGGGCATTTTGGGTAAGTGAGGAATATATTTTTGGCTTGAAGTCTAAAGCCGGGTGCTCTCACCATGTTGACTTGGTCAATTGGAGTAACACCTTCTTGCCATGCAATTGGAGTAATGGAGTAGAATATATAGTGGTTGGATTTTCAGACCTCCATTTTGAAATTCAAATTCCGACAACTTTGGGCCCACAAAAGCGGGCACCGTATTAATATT

Gene Information

NCBI Accession YP_008198569.1
Location 91-465
Protein Name AV2
Coding Region ATGGATTTATGGGACCCACTTCAGAACCCTCTCCCAGATACTTTATACGGTTTTCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAACCAGGAACTCTAGGGTTCGAGCTTTGTTCCGATCTCATTCGCATACTGCGCGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAA
Protein Sequence MDLWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSDLIRILRVKQYGRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFSKRPDEEKEGGSHSEGVRRSL

NCBI Accession YP_008198570.1
Location 257-1021
Protein Name AV1
Coding Region ATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAAGGTACAGGATTATGAATTCAAGATGGATGTCCCACATAGTGGCACCTTTGTGTGTGTTTCTGATTTTACAAGGGGTACTGGGCTTACACATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGACGACAACGTGGCCAAGAGGGACCATACAAACATCATTACTTACTGGTTGATCCGAGATAGAAGACCCAATAAGGATCCATTGACGTTTGCACAGGCCTTCACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTTCTGAAGAAATTCTCTGTTACTGTATCTGGTGGTCCTTATAACCACAAGGAGCAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAAGAGGCTAAATATGAGAATCATTTAGAGAATGCATTAATGTTGTATTCTGCTAGCAGCCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCATAATAATTAA
Protein Sequence MVGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFAQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN

NCBI Accession YP_008198571.1
Location 1018-1452
Protein Name AC3
Coding Region ATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCACCTCAGACTGATGTATGTCCACGAGAGCGCACAGGGGAGAACCATCCTCAAATTCCAGCTGAGGGTCAACTACAGGGAAAGGAGACAACTGGGATTCCACAAGATCTTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCCCAATTGGACTGGTATTTTGCAACGCCTTAAATGGCATATATGTAATAGCTTAGCTAGTTTAGGGTTTTTTTCTCTTATTAATTTAGTTTATGTAATCAGGCATTTGCCTGAATCAGTTAGATGGATAGACGAAGTCGATGTAATAGATTGCAAAGATGATATAAAAGTACTTCTTTATTAA
Protein Sequence MDSRTGESLSHAQTTRAVEFDTNPMSVGRTAPFHLRLMYVHESAQGRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIPNWTGILQRLKWHICNSLASLGFFSLINLVYVIRHLPESVRWIDEVDVIDCKDDIKVLLY

NCBI Accession YP_008198572.1
Location 1169-1615
Protein Name AC2
Coding Region ATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCCATTCAGGAGCCACTACACACAGAGGCGAAGAAGGCCAAGAGGAAAGTTCCTGAACAGAGGACAAGGATAGTGTGGAAGGGTTGCGGCTGTTCAGCCTTCATCACCACAACCTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCACCTCAGACTGATGTATGTCCACGAGAGCGCACAGGGGAGAACCATCCTCAAATTCCAGCTGAGGGTCAACTACAGGGAAAGGAGACAACTGGGATTCCACAAGATCTTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCCCAATTGGACTGGTATTTTGCAACGCCTTAA
Protein Sequence MSNPLSGYKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGCGCSAFITTTCKYQHGFTHRGITKSCSDYESSRIRHQPHVCGSDCTIPPQTDVCPRERTGENHPQIPAEGQLQGKETTGIPQDLPPIPDLDDPSNWCYSQLDWYFATP

NCBI Accession YP_008198573.1
Location 1524-2618
Protein Name AC1
Coding Region ATGGTGAGAGCACCCGGCTTTAGACTTCAAGCCAAAAATATATTCCTCACTTACCCAAAATGCCCCCTATCTAAAGACACAGTCCTTGAGCTATTAAAGGGCATTCAATGCCCTTCTGATAAATTATTTATCCGAGTTGCTCAAGAGAAACACCAGGATGGGAGCCTGCACCTCCATGCTCTCATCCAATTCAAAGGTAAGTGCCAATTCACAAACCCCAGGCACTTCGACCTTACTCATCCCAACTCCTCTACACAATACCACCCCAATTTCCAATCAGCAAAGTCCTCTTCCGATGTCAAGGCCTACATTGAGAAGGACCAAGATTTTGTTGACAGTGGAGTCTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTCAGCAAACGGCTAACGATGCTTACGCCCAGGCATTAAATACTGGGTGTAAATCTGAAGCGTTACAGATAATAAAGGAATTGTGTCCAAAAGACTTTGTTCTTCAATTCCATAATATTAATAATAATTTAGATAGGATTTTTTCTCCTCCTCCTTCTGTATATTCTTCTCCTTTTTCTCTTTCTTCTTTCAATAATGTTCCTGACATTATCAGCGATTGGGCTGCTGAAAATGTCATGGATGCCGCTGCGCGGCCAGATAGGCCCATTAGTATTGTAATAGAAGGCCCAAGTAGAATAGGTAAAACAGTCTGGGCTAGATCTTTAGGACCACATAATTATCTGTGTGGTCATTTAGACTTAAGTCCAAAAGTATACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAATCCAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGCTCGTCATTTAAACTCTGGTTGGACAAACCAGAGCAGGGAGCACTCAAGATTTGGGCAACAGCAAACGCTTTATTCTGCGATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCCATTCAGGAGCCACTACACACAGAGGCGAAGAAGGCCAAGAGGAAAGTTCCTGA
Protein Sequence MVRAPGFRLQAKNIFLTYPKCPLSKDTVLELLKGIQCPSDKLFIRVAQEKHQDGSLHLHALIQFKGKCQFTNPRHFDLTHPNSSTQYHPNFQSAKSSSDVKAYIEKDQDFVDSGVFQVDGRSARGGQQTANDAYAQALNTGCKSEALQIIKELCPKDFVLQFHNINNNLDRIFSPPPSVYSSPFSLSSFNNVPDIISDWAAENVMDAAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKIWATANALFCDVQSPFWVQEEVSHSGATTHRGEEGQEESS

NCBI Accession YP_008198574.1
Location 2204-2461
Protein Name AC4
Coding Region ATGGGAGCCTGCACCTCCATGCTCTCATCCAATTCAAAGGTAAGTGCCAATTCACAAACCCCAGGCACTTCGACCTTACTCATCCCAACTCCTCTACACAATACCACCCCAATTTCCAATCAGCAAAGTCCTCTTCCGATGTCAAGGCCTACATTGAGAAGGACCAAGATTTTGTTGACAGTGGAGTCTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTCAGCAAACGGCTAACGATGCTTACGCCCAGGCATTAA
Protein Sequence MGACTSMLSSNSKVSANSQTPGTSTLLIPTPLHNTTPISNQQSPLPMSRPTLRRTKILLTVESSRSTEEVLEEVSKRLTMLTPRH

References More References in PubMed

1

First Report of Sweet potato leaf curl Georgia virus on Sweet Potato in China.

Qin Y, et al.  Plant Dis. 2013 Oct;97(10):1388. doi: 10.1094/PDIS-10-12-0967-PDN.

PMID: 30722158
2

Diversity of Sweepoviruses Infecting Sweet Potato in China.

Liu Q, et al.  Plant Dis. 2017 Dec;101(12):2098-2103. doi: 10.1094/PDIS-04-17-0524-RE. Epub 2017 Oct 9.

PMID: 30677378
3

Complete genome sequence of a novel monopartite begomovirus infecting sweet potato in China.

Liu Q, et al.  Arch Virol. 2014 Jun;159(6):1537-40. doi: 10.1007/s00705-013-1958-2. Epub 2014 Jan 1.

PMID: 24378821
4

A rapid, simple, and highly efficient method for VIGS and in vitro-inoculation of plant virus by INABS applied to crops that develop axillary buds and can survive from cuttings.

Liu Q, et al.  BMC Plant Biol. 2021 Nov 20;21(1):545. doi: 10.1186/s12870-021-03331-9.

PMID: 34800968