Sweet potato leaf curl Georgia virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000842125.1 |
| Release date | 2015/2/12 |
| Submitter | Lotrakul,P., Valverde,R.A., Clark,C.A., Fauquet,C.M. |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_004640
ACCGGTGCCCGCCGCGCCCTTTTAAAGTGGGCCCCACACGCTTTGCTTTAATTATTTAAAGGCGTGCCTGGTGTAGACTTGGTCGCCAAGTATGGCTGAATTGTGGGACCCTCTGCAAAACCCACTACCAGATACTTTATACGGTTTCCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAAGAGGGGTGACCGCATCCCGAAGGGATGTGTTGGTCCCTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGGACTGGGCTTACCCATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGATGACAACGTCGCCAAAAGAGACCATACCAATATTATTACTTATTGGTTGGTCCGAGATCGGAGGCCCAATATGGATCCATTAACATTTGCACAGGCTTTTACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTCCTGAAGAAGTTCTCTGTTACTGTATCTGGTGGCCCTTATAACCACAAGGAACAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAGGAGGCCAAGTATGAGAATCATTTAGAGAATGCGTTAATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCACAACAATTAATAAAGAAGTATTTTTATATCATCTTTACAATCTATTACATCGATTTCTTCTATCCATCTAACTGATTCAGGCAAATGCCTGATTACATAAACTAAATTGATAAGAGAAAAAAAACCTAAACTAGCTAAGCTATTACATATATGCCATTTAAGGCGTTGCAAAATACCAGTCCAACTGGGAATAACACCAGTCAGCTGGGTTGTCACTATTCGGAATTGGAGGAATATCTTCAGGAATCCAATTTCCCTCCTGTTCCTGTGGTTGACTTGAAGCTGCAACTTGATGACCTTCTTTGTGTTTATGTTGTTGGTATGGACATACAACAACCGTAGATGGAATGGAGCAGTCTGACCCACAGACATGGGGTTGTTGAAGAATTCTGCTGCTCTCGTAGTCTGTGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGATATTTACAGTCGTTGGTGATGAAGGCTGAGCAACCACAGCCCTTCCACACTATCCTAGTCCTCGGCTCAGGAGCCTTCCTCTTGGCTTTCTTCGCCGCTGTGTGCAGAGGTTCCTGAATGGGACACTTCCTCTTGTATCCAGAAGGGGCTGTCGACATCACAGAATATTGCGTTCTTAACAGCCCAGTTCTTAAGCGCCTCTTGTTCTGGCTTGTCCAGCCAGAATTTAAAAGAGGAACCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTGCTTTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGATTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTACACTTTTGGGCTCAAGTCCAAATGACCACACAGATAATTATGTGGACCTAAAGACCGTGCCCAAACTGTTTTACCTATCCTACTTGGGCCTTCTATTACAATACTAATGGGCCTATCTGGCCGCGCAGCGGAATCCATGACATTTTCAGCGGCCCAGTCGCTGATAATGTCAGGTACATTATTGAAAGAAGAAGATAAAAAAGGAGAAGAATATACAGAAGGAGGAGGAGAAAAAATTCTATCTAAATTACTACGTAAATTATGATATTGAAAAATAAAATCTCTAGGGAGTTTCTCCCTAATTATTTGTAATGCTGCTTCAGCAGAGCCTGCGTTTAAGGCCTCTGCTGCTGCATCATTAGCTGTCTGCTGACCTCCTCTAGCAGATCTTCCGTCGACTTGAAAAGTACCCCAGTCGATGTAATCACCGTCTTTCTCGATGTAGGACTTGACATCTGATGATGATTTAGCTCCCTGGAAATTTGGATGGAATTGGTTGGAGCTGTTGGGGTGTTGCAGGTCGAAATGTCTGGGGTTTTTAAATTGGGCTTTACCCTTGAACTGGATGAGAGCATGGAGGTGCAAAGACCCATCTTGGTGTTCTTCTTGACTAACTCTGATAAACAATTTATCAGATGGGCAGTTTATTGCCTTTAATAGTTCAAGAGCTGTTTCTTTAGAGAGAGAACATTTGGGATAAGTAAGAAAGACATTTTTGGCTGAGACTCTAAAACCTGGTTGACGAGGCATATTGGTGTCCCTCTAAACTCCACGGAATTGGTGTCTTTGGTGTCCCATTTATACCTGGGACACCAATGGCATTTTGGTAAAAAAAAACCTTTAATTTGAATTCTGAAATCCTATTGGTCCTCCGTAAAGCGGGCACCGTATTAATATT
Gene Information
| NCBI Accession | NP_808767.1 |
|---|---|
| Location | 92-436 |
| Gene Name | AV2 |
| Protein Name | precoat protein |
| Coding Region | ATGGCTGAATTGTGGGACCCTCTGCAAAACCCACTACCAGATACTTTATACGGTTTCCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAAGAGGGGTGA |
| Protein Sequence | MAELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG |
| NCBI Accession | NP_808768.1 |
|---|---|
| Location | 261-1025 |
| Gene Name | AV1 |
| Protein Name | coat protein |
| Coding Region | ATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAAGAGGGGTGACCGCATCCCGAAGGGATGTGTTGGTCCCTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGGACTGGGCTTACCCATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGATGACAACGTCGCCAAAAGAGACCATACCAATATTATTACTTATTGGTTGGTCCGAGATCGGAGGCCCAATATGGATCCATTAACATTTGCACAGGCTTTTACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTCCTGAAGAAGTTCTCTGTTACTGTATCTGGTGGCCCTTATAACCACAAGGAACAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAGGAGGCCAAGTATGAGAATCATTTAGAGAATGCGTTAATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCACAACAATTAA |
| Protein Sequence | MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLVRDRRPNMDPLTFAQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN |
| NCBI Accession | NP_808769.1 |
|---|---|
| Location | 1022-1459 |
| Gene Name | AC3 |
| Protein Name | AC3 protein |
| Coding Region | ATGGATTCACGCACAGGGGAATCACTAAGTCATGCACAGACTACGAGAGCAGCAGAATTCTTCAACAACCCCATGTCTGTGGGTCAGACTGCTCCATTCCATCTACGGTTGTTGTATGTCCATACCAACAACATAAACACAAAGAAGGTCATCAAGTTGCAGCTTCAAGTCAACCACAGGAACAGGAGGGAAATTGGATTCCTGAAGATATTCCTCCAATTCCGAATAGTGACAACCCAGCTGACTGGTGTTATTCCCAGTTGGACTGGTATTTTGCAACGCCTTAAATGGCATATATGTAATAGCTTAGCTAGTTTAGGTTTTTTTTCTCTTATCAATTTAGTTTATGTAATCAGGCATTTGCCTGAATCAGTTAGATGGATAGAAGAAATCGATGTAATAGATTGTAAAGATGATATAAAAATACTTCTTTATTAA |
| Protein Sequence | MDSRTGESLSHAQTTRAAEFFNNPMSVGQTAPFHLRLLYVHTNNINTKKVIKLQLQVNHRNRREIGFLKIFLQFRIVTTQLTGVIPSWTGILQRLKWHICNSLASLGFFSLINLVYVIRHLPESVRWIEEIDVIDCKDDIKILLY |
| NCBI Accession | NP_808770.1 |
|---|---|
| Location | 1173-1622 |
| Gene Name | AC2 |
| Protein Name | AC2 protein |
| Coding Region | ATGTCGACAGCCCCTTCTGGATACAAGAGGAAGTGTCCCATTCAGGAACCTCTGCACACAGCGGCGAAGAAAGCCAAGAGGAAGGCTCCTGAGCCGAGGACTAGGATAGTGTGGAAGGGCTGTGGTTGCTCAGCCTTCATCACCAACGACTGTAAATATCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCACAGACTACGAGAGCAGCAGAATTCTTCAACAACCCCATGTCTGTGGGTCAGACTGCTCCATTCCATCTACGGTTGTTGTATGTCCATACCAACAACATAAACACAAAGAAGGTCATCAAGTTGCAGCTTCAAGTCAACCACAGGAACAGGAGGGAAATTGGATTCCTGAAGATATTCCTCCAATTCCGAATAGTGACAACCCAGCTGACTGGTGTTATTCCCAGTTGGACTGGTATTTTGCAACGCCTTAA |
| Protein Sequence | MSTAPSGYKRKCPIQEPLHTAAKKAKRKAPEPRTRIVWKGCGCSAFITNDCKYQHGFTHRGITKSCTDYESSRILQQPHVCGSDCSIPSTVVVCPYQQHKHKEGHQVAASSQPQEQEGNWIPEDIPPIPNSDNPADWCYSQLDWYFATP |
| NCBI Accession | NP_808771.1 |
|---|---|
| Location | 1531-2625 |
| Gene Name | AC1 |
| Protein Name | rep protein |
| Coding Region | ATGCCTCGTCAACCAGGTTTTAGAGTCTCAGCCAAAAATGTCTTTCTTACTTATCCCAAATGTTCTCTCTCTAAAGAAACAGCTCTTGAACTATTAAAGGCAATAAACTGCCCATCTGATAAATTGTTTATCAGAGTTAGTCAAGAAGAACACCAAGATGGGTCTTTGCACCTCCATGCTCTCATCCAGTTCAAGGGTAAAGCCCAATTTAAAAACCCCAGACATTTCGACCTGCAACACCCCAACAGCTCCAACCAATTCCATCCAAATTTCCAGGGAGCTAAATCATCATCAGATGTCAAGTCCTACATCGAGAAAGACGGTGATTACATCGACTGGGGTACTTTTCAAGTCGACGGAAGATCTGCTAGAGGAGGTCAGCAGACAGCTAATGATGCAGCAGCAGAGGCCTTAAACGCAGGCTCTGCTGAAGCAGCATTACAAATAATTAGGGAGAAACTCCCTAGAGATTTTATTTTTCAATATCATAATTTACGTAGTAATTTAGATAGAATTTTTTCTCCTCCTCCTTCTGTATATTCTTCTCCTTTTTTATCTTCTTCTTTCAATAATGTACCTGACATTATCAGCGACTGGGCCGCTGAAAATGTCATGGATTCCGCTGCGCGGCCAGATAGGCCCATTAGTATTGTAATAGAAGGCCCAAGTAGGATAGGTAAAACAGTTTGGGCACGGTCTTTAGGTCCACATAATTATCTGTGTGGTCATTTGGACTTGAGCCCAAAAGTGTACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAATCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAAAGCAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGTTCCTCTTTTAAATTCTGGCTGGACAAGCCAGAACAAGAGGCGCTTAAGAACTGGGCTGTTAAGAACGCAATATTCTGTGATGTCGACAGCCCCTTCTGGATACAAGAGGAAGTGTCCCATTCAGGAACCTCTGCACACAGCGGCGAAGAAAGCCAAGAGGAAGGCTCCTGA |
| Protein Sequence | MPRQPGFRVSAKNVFLTYPKCSLSKETALELLKAINCPSDKLFIRVSQEEHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPNSSNQFHPNFQGAKSSSDVKSYIEKDGDYIDWGTFQVDGRSARGGQQTANDAAAEALNAGSAEAALQIIREKLPRDFIFQYHNLRSNLDRIFSPPPSVYSSPFLSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKFWLDKPEQEALKNWAVKNAIFCDVDSPFWIQEEVSHSGTSAHSGEESQEEGS |
| NCBI Accession | NP_808772.1 |
|---|---|
| Location | 2211-2468 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGTCTTTGCACCTCCATGCTCTCATCCAGTTCAAGGGTAAAGCCCAATTTAAAAACCCCAGACATTTCGACCTGCAACACCCCAACAGCTCCAACCAATTCCATCCAAATTTCCAGGGAGCTAAATCATCATCAGATGTCAAGTCCTACATCGAGAAAGACGGTGATTACATCGACTGGGGTACTTTTCAAGTCGACGGAAGATCTGCTAGAGGAGGTCAGCAGACAGCTAATGATGCAGCAGCAGAGGCCTTAA |
| Protein Sequence | MGLCTSMLSSSSRVKPNLKTPDISTCNTPTAPTNSIQISRELNHHQMSSPTSRKTVITSTGVLFKSTEDLLEEVSRQLMMQQQRP |
References More References in PubMed
| 1 |
First Report of Sweet potato leaf curl Georgia virus on Sweet Potato in China. Qin Y, et al. Plant Dis. 2013 Oct;97(10):1388. doi: 10.1094/PDIS-10-12-0967-PDN. PMID: 30722158 |
|---|---|
| 2 |
Luan YS, et al. Virus Genes. 2007 Oct;35(2):379-85. doi: 10.1007/s11262-007-0084-1. Epub 2007 Feb 21. PMID: 17318425 |
| 3 |
Prasanth G, et al. Plant Dis. 2008 Feb;92(2):311. doi: 10.1094/PDIS-92-2-0311B. PMID: 30769415 |
| 4 |
Zhang SC, et al. Arch Virol. 2011 Jun;156(6):955-68. doi: 10.1007/s00705-011-0930-2. Epub 2011 Feb 8. PMID: 21302123 |
| 5 |
Zhang SB, et al. Plant Dis. 2014 Nov;98(11):1588. doi: 10.1094/PDIS-11-13-1161-PDN. PMID: 30699798 |
| 6 |
Complete genome sequence of a novel monopartite begomovirus infecting sweet potato in China. Liu Q, et al. Virus Genes. 2013 Dec;47(3):591-4. doi: 10.1007/s11262-013-0982-3. Epub 2013 Sep 22. PMID: 24057883 |
| 7 |
Genetic identification of two sweet-potato-infecting begomoviruses in South Africa. Esterhuizen LL, et al. Arch Virol. 2012 Nov;157(11):2241-5. doi: 10.1007/s00705-012-1398-4. Epub 2012 Jul 20. PMID: 22814698 |
| 8 |
Kashif M, et al. Plant Dis. 2012 Oct;96(10):1430-1437. doi: 10.1094/PDIS-03-12-0268-RE. PMID: 30727310 |