Sweet potato leaf curl Georgia virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000842125.1 |
| Release date |
2015/2/12 |
| Submitter |
Lotrakul,P., Valverde,R.A., Clark,C.A., Fauquet,C.M. |
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGTGCCCGCCGCGCCCTTTTAAAGTGGGCCCCACACGCTTTGCTTTAATTATTTAAAGGCGTGCCTGGTGTAGACTTGGTCGCCAAGTATGGCTGAATTGTGGGACCCTCTGCAAAACCCACTACCAGATACTTTATACGGTTTCCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAAGAGGGGTGACCGCATCCCGAAGGGATGTGTTGGTCCCTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGGACTGGGCTTACCCATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGATGACAACGTCGCCAAAAGAGACCATACCAATATTATTACTTATTGGTTGGTCCGAGATCGGAGGCCCAATATGGATCCATTAACATTTGCACAGGCTTTTACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTCCTGAAGAAGTTCTCTGTTACTGTATCTGGTGGCCCTTATAACCACAAGGAACAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAGGAGGCCAAGTATGAGAATCATTTAGAGAATGCGTTAATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCACAACAATTAATAAAGAAGTATTTTTATATCATCTTTACAATCTATTACATCGATTTCTTCTATCCATCTAACTGATTCAGGCAAATGCCTGATTACATAAACTAAATTGATAAGAGAAAAAAAACCTAAACTAGCTAAGCTATTACATATATGCCATTTAAGGCGTTGCAAAATACCAGTCCAACTGGGAATAACACCAGTCAGCTGGGTTGTCACTATTCGGAATTGGAGGAATATCTTCAGGAATCCAATTTCCCTCCTGTTCCTGTGGTTGACTTGAAGCTGCAACTTGATGACCTTCTTTGTGTTTATGTTGTTGGTATGGACATACAACAACCGTAGATGGAATGGAGCAGTCTGACCCACAGACATGGGGTTGTTGAAGAATTCTGCTGCTCTCGTAGTCTGTGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGATATTTACAGTCGTTGGTGATGAAGGCTGAGCAACCACAGCCCTTCCACACTATCCTAGTCCTCGGCTCAGGAGCCTTCCTCTTGGCTTTCTTCGCCGCTGTGTGCAGAGGTTCCTGAATGGGACACTTCCTCTTGTATCCAGAAGGGGCTGTCGACATCACAGAATATTGCGTTCTTAACAGCCCAGTTCTTAAGCGCCTCTTGTTCTGGCTTGTCCAGCCAGAATTTAAAAGAGGAACCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTGCTTTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGATTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTACACTTTTGGGCTCAAGTCCAAATGACCACACAGATAATTATGTGGACCTAAAGACCGTGCCCAAACTGTTTTACCTATCCTACTTGGGCCTTCTATTACAATACTAATGGGCCTATCTGGCCGCGCAGCGGAATCCATGACATTTTCAGCGGCCCAGTCGCTGATAATGTCAGGTACATTATTGAAAGAAGAAGATAAAAAAGGAGAAGAATATACAGAAGGAGGAGGAGAAAAAATTCTATCTAAATTACTACGTAAATTATGATATTGAAAAATAAAATCTCTAGGGAGTTTCTCCCTAATTATTTGTAATGCTGCTTCAGCAGAGCCTGCGTTTAAGGCCTCTGCTGCTGCATCATTAGCTGTCTGCTGACCTCCTCTAGCAGATCTTCCGTCGACTTGAAAAGTACCCCAGTCGATGTAATCACCGTCTTTCTCGATGTAGGACTTGACATCTGATGATGATTTAGCTCCCTGGAAATTTGGATGGAATTGGTTGGAGCTGTTGGGGTGTTGCAGGTCGAAATGTCTGGGGTTTTTAAATTGGGCTTTACCCTTGAACTGGATGAGAGCATGGAGGTGCAAAGACCCATCTTGGTGTTCTTCTTGACTAACTCTGATAAACAATTTATCAGATGGGCAGTTTATTGCCTTTAATAGTTCAAGAGCTGTTTCTTTAGAGAGAGAACATTTGGGATAAGTAAGAAAGACATTTTTGGCTGAGACTCTAAAACCTGGTTGACGAGGCATATTGGTGTCCCTCTAAACTCCACGGAATTGGTGTCTTTGGTGTCCCATTTATACCTGGGACACCAATGGCATTTTGGTAAAAAAAAACCTTTAATTTGAATTCTGAAATCCTATTGGTCCTCCGTAAAGCGGGCACCGTATTAATATT
Gene Information
|
NCBI Accession
|
NP_808767.1
|
|
Location
|
92-436 |
|
Gene Name
|
AV2 |
|
Protein Name
|
precoat protein |
|
Coding Region
|
ATGGCTGAATTGTGGGACCCTCTGCAAAACCCACTACCAGATACTTTATACGGTTTCCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAAGAGGGGTGA |
|
Protein Sequence
|
MAELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG |
|
NCBI Accession
|
NP_808768.1
|
|
Location
|
261-1025 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAAGAGGGGTGACCGCATCCCGAAGGGATGTGTTGGTCCCTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGGACTGGGCTTACCCATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGATGACAACGTCGCCAAAAGAGACCATACCAATATTATTACTTATTGGTTGGTCCGAGATCGGAGGCCCAATATGGATCCATTAACATTTGCACAGGCTTTTACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTCCTGAAGAAGTTCTCTGTTACTGTATCTGGTGGCCCTTATAACCACAAGGAACAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAGGAGGCCAAGTATGAGAATCATTTAGAGAATGCGTTAATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCACAACAATTAA |
|
Protein Sequence
|
MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLVRDRRPNMDPLTFAQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN |
|
NCBI Accession
|
NP_808769.1
|
|
Location
|
1022-1459 |
|
Gene Name
|
AC3 |
|
Protein Name
|
AC3 protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAATCACTAAGTCATGCACAGACTACGAGAGCAGCAGAATTCTTCAACAACCCCATGTCTGTGGGTCAGACTGCTCCATTCCATCTACGGTTGTTGTATGTCCATACCAACAACATAAACACAAAGAAGGTCATCAAGTTGCAGCTTCAAGTCAACCACAGGAACAGGAGGGAAATTGGATTCCTGAAGATATTCCTCCAATTCCGAATAGTGACAACCCAGCTGACTGGTGTTATTCCCAGTTGGACTGGTATTTTGCAACGCCTTAAATGGCATATATGTAATAGCTTAGCTAGTTTAGGTTTTTTTTCTCTTATCAATTTAGTTTATGTAATCAGGCATTTGCCTGAATCAGTTAGATGGATAGAAGAAATCGATGTAATAGATTGTAAAGATGATATAAAAATACTTCTTTATTAA |
|
Protein Sequence
|
MDSRTGESLSHAQTTRAAEFFNNPMSVGQTAPFHLRLLYVHTNNINTKKVIKLQLQVNHRNRREIGFLKIFLQFRIVTTQLTGVIPSWTGILQRLKWHICNSLASLGFFSLINLVYVIRHLPESVRWIEEIDVIDCKDDIKILLY |
|
NCBI Accession
|
NP_808770.1
|
|
Location
|
1173-1622 |
|
Gene Name
|
AC2 |
|
Protein Name
|
AC2 protein |
|
Coding Region
|
ATGTCGACAGCCCCTTCTGGATACAAGAGGAAGTGTCCCATTCAGGAACCTCTGCACACAGCGGCGAAGAAAGCCAAGAGGAAGGCTCCTGAGCCGAGGACTAGGATAGTGTGGAAGGGCTGTGGTTGCTCAGCCTTCATCACCAACGACTGTAAATATCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCACAGACTACGAGAGCAGCAGAATTCTTCAACAACCCCATGTCTGTGGGTCAGACTGCTCCATTCCATCTACGGTTGTTGTATGTCCATACCAACAACATAAACACAAAGAAGGTCATCAAGTTGCAGCTTCAAGTCAACCACAGGAACAGGAGGGAAATTGGATTCCTGAAGATATTCCTCCAATTCCGAATAGTGACAACCCAGCTGACTGGTGTTATTCCCAGTTGGACTGGTATTTTGCAACGCCTTAA |
|
Protein Sequence
|
MSTAPSGYKRKCPIQEPLHTAAKKAKRKAPEPRTRIVWKGCGCSAFITNDCKYQHGFTHRGITKSCTDYESSRILQQPHVCGSDCSIPSTVVVCPYQQHKHKEGHQVAASSQPQEQEGNWIPEDIPPIPNSDNPADWCYSQLDWYFATP |
|
NCBI Accession
|
NP_808771.1
|
|
Location
|
1531-2625 |
|
Gene Name
|
AC1 |
|
Protein Name
|
rep protein |
|
Coding Region
|
ATGCCTCGTCAACCAGGTTTTAGAGTCTCAGCCAAAAATGTCTTTCTTACTTATCCCAAATGTTCTCTCTCTAAAGAAACAGCTCTTGAACTATTAAAGGCAATAAACTGCCCATCTGATAAATTGTTTATCAGAGTTAGTCAAGAAGAACACCAAGATGGGTCTTTGCACCTCCATGCTCTCATCCAGTTCAAGGGTAAAGCCCAATTTAAAAACCCCAGACATTTCGACCTGCAACACCCCAACAGCTCCAACCAATTCCATCCAAATTTCCAGGGAGCTAAATCATCATCAGATGTCAAGTCCTACATCGAGAAAGACGGTGATTACATCGACTGGGGTACTTTTCAAGTCGACGGAAGATCTGCTAGAGGAGGTCAGCAGACAGCTAATGATGCAGCAGCAGAGGCCTTAAACGCAGGCTCTGCTGAAGCAGCATTACAAATAATTAGGGAGAAACTCCCTAGAGATTTTATTTTTCAATATCATAATTTACGTAGTAATTTAGATAGAATTTTTTCTCCTCCTCCTTCTGTATATTCTTCTCCTTTTTTATCTTCTTCTTTCAATAATGTACCTGACATTATCAGCGACTGGGCCGCTGAAAATGTCATGGATTCCGCTGCGCGGCCAGATAGGCCCATTAGTATTGTAATAGAAGGCCCAAGTAGGATAGGTAAAACAGTTTGGGCACGGTCTTTAGGTCCACATAATTATCTGTGTGGTCATTTGGACTTGAGCCCAAAAGTGTACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAATCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAAAGCAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGTTCCTCTTTTAAATTCTGGCTGGACAAGCCAGAACAAGAGGCGCTTAAGAACTGGGCTGTTAAGAACGCAATATTCTGTGATGTCGACAGCCCCTTCTGGATACAAGAGGAAGTGTCCCATTCAGGAACCTCTGCACACAGCGGCGAAGAAAGCCAAGAGGAAGGCTCCTGA |
|
Protein Sequence
|
MPRQPGFRVSAKNVFLTYPKCSLSKETALELLKAINCPSDKLFIRVSQEEHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPNSSNQFHPNFQGAKSSSDVKSYIEKDGDYIDWGTFQVDGRSARGGQQTANDAAAEALNAGSAEAALQIIREKLPRDFIFQYHNLRSNLDRIFSPPPSVYSSPFLSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKFWLDKPEQEALKNWAVKNAIFCDVDSPFWIQEEVSHSGTSAHSGEESQEEGS |
|
NCBI Accession
|
NP_808772.1
|
|
Location
|
2211-2468 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGTCTTTGCACCTCCATGCTCTCATCCAGTTCAAGGGTAAAGCCCAATTTAAAAACCCCAGACATTTCGACCTGCAACACCCCAACAGCTCCAACCAATTCCATCCAAATTTCCAGGGAGCTAAATCATCATCAGATGTCAAGTCCTACATCGAGAAAGACGGTGATTACATCGACTGGGGTACTTTTCAAGTCGACGGAAGATCTGCTAGAGGAGGTCAGCAGACAGCTAATGATGCAGCAGCAGAGGCCTTAA |
|
Protein Sequence
|
MGLCTSMLSSSSRVKPNLKTPDISTCNTPTAPTNSIQISRELNHHQMSSPTSRKTVITSTGVLFKSTEDLLEEVSRQLMMQQQRP |