Sweet potato leaf curl China virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823565.1
Isolate China
Release date 2018/8/25
Submitter Luan,Y.S., Zhang,J., Liu,D.M., Li,W.L., Luan,Y.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_038464
TAAAATTGTTCTTTCATTAATAGAGTAATGTTTTTACATCGTCTTTACAATCGTTTACATCTACTTCTTCTACCCACAAGAACTTGTGGGGTAAATTCCTAATTACATAAACTAAGTTATACAATGATAAATAACCTAAACTACTTAACTCATTACAAATTCGCCATTTAAGGCGTGTCAAAATACCAGTCCAACTGTGAATAACACCAGTCAGACGGGTTGTAATTATCCTGAATTGGAGAAAGATCTTGTGGAATCCCAGTTGCTTCCTCTCCCTGTGGTTCACTTGCAGCTGGAACTTGAGGATTGTTCTCCCCGCTACGCTCTGGTGGGCGTATAAACACTTGAGGTAGAACGGAGCAGTCCGACCCACAGACATGGGATTGTCGAAGAATTCGACTGCTCTCATAGTCTGTGCATGACTTAGTGATTCCCCAGTGCGTGAATCCATTCTGGTATTTGCACTGAGGAGTTATGAAAGCGGAACAGCCGCACTGCTTCCACACTATCCTTGTCCTTTGCTCTGGTATGCGGTGTTTTTTTTTAGCCGCTGCGTGAATTGGTTCCTGAATTGGCGCCTTCCTCTTGTCTCCAGAATGGGCTTCTGACATTACAGAATATGGTGTTCTTGCAAGCCCACTGTCTCAGTGCGTCTTGTTCTGGCTTATCTAGCCAGGATTTAAATGAGGATCCTTCGCCTGGATTGCAGAGGAAGATAGTGGATATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTGCCAGTCTCTTTGGGCCCCAATGAATTCTTTGGGGGTCGACGTCATCAATGACGTTGTACCAAGCACTATTACTGTACACTCTTGGACTCAGATCCAAGTGCCCACACAAATAATTGTGTGGCCCAAGAGACCTAGCCCAAACTGTTTTACCTATCCTACTTGGGCCTTCTATAACTATACTAATGGGCCTATCTGGCCGCGCAGCGGCATCCATGATGTTATCAGCAGCCCAATTGCTGATAATATCAGGTACATTATTAAAAGAAGAAGAAGAAAAAGGAGAAGAATATACAGCAGGAGGAGGAGAAAAAATCCTATCTAAATTACCAACTAAATTATGATATTGAAAAATAAATTTTTCTGGGAGTTTCCCCCTTATTATTTGTAATGCAGCCTCCTTGCTGCCGGAATTTAAGGCCTCTGCTGCCGCGTCATTAGCAGTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCACCCCAGTTGAGAGTATCCCCGTCCTTCTCGACGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGGATGTTGGGGTGAAAATGAGATGACCTGTATGGTGATACCAGGTCGAAGAATCTGCTATTTGTGCAGACGAATTTGCCTTCGAACTGCACCAGCATGTGGAGATGAGGTTCCCCATCCTCGTGAAGTTCTCTGGCTATGTGGATATATTTTTTGTTTGTGGGTGTGTTTATTTTCAGTATTTGCTCTAAAGCATCTTCTTTAGAGAGAGAACATCGTGGATAAGTAATAAAATAATTTTTAGAAGAAACTCTAAACCGTTTAGGAGCTGCCATCTGTATTGGTGACAATCCAAACTTGCTGAATGAATTGGTGACTGGTGACAATTTATACTATGTCACCAAATGGCATTATGGTAATTTGAACAACTTTAATTTGAATTCGAAAATGCTATTGGTCCGCCAAAAAGCGGGCACCGTATTAATATTACCGGTGCCCGCGCCTCCCTTTTAATGTGGACCCCACACGCTTTACTTTAATTATTAAAGACGTGCCTGTTGCAGACTTGGTCGCCAAGAATGGATTTGTGGGACCCGCTTCAGAACCCTCTCCCAGATACCTTATACGGTTTTCGGTGTATGCTTTCTGTAAAATACCTGCAAAGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGCTCTGATCTCATCCGCATACTGCGTGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGATCGCATCCCAAAGGGATGTGTGGGTCCCTGTAAGGTACAGGACTATGAGTTCAAGATGGATGTCCCGCACAGTGGTACCTTTGTATGTGTGTCTGATTTCACTAGGGGAACTGGGCTTACCCATCGATTGGGTAAGAGGGTGTGTGTTAAGTCCATGGGCATTGATGGTAAGGTCTGGATGGACGACAATGTCGCCAAACGAGACCACACCAACATCATCACTTACTGGTTGATCCGTGATAGGAGGCCCAATAAGGATCCATTAACGTTTAGTCAGGCCTTTACTATGTATGATAATGAGCCCACTACAGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAGGTATTGAAGAAATTCTCTGTAACTGTTTCTGGTGGGCCTTATAACCACAAGGAACAGGCATTAGTTAGGAAGTTTTTTAAGGGTTTGTATAACCATGTTACGTACAACCATAAGGAGGAAGCTAAGTATGAAAATCATTTAGAGAATGCTTTGATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTATATCAGACTCTGCGTTGTAGGGCTTATTTTTATGATTCACACAATAATTAA

Gene Information

NCBI Accession YP_009506495.1
Location 17-451
Protein Name AC3
Coding Region ATGGATTCACGCACTGGGGAATCACTAAGTCATGCACAGACTATGAGAGCAGTCGAATTCTTCGACAATCCCATGTCTGTGGGTCGGACTGCTCCGTTCTACCTCAAGTGTTTATACGCCCACCAGAGCGTAGCGGGGAGAACAATCCTCAAGTTCCAGCTGCAAGTGAACCACAGGGAGAGGAAGCAACTGGGATTCCACAAGATCTTTCTCCAATTCAGGATAATTACAACCCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAAATGGCGAATTTGTAATGAGTTAAGTAGTTTAGGTTATTTATCATTGTATAACTTAGTTTATGTAATTAGGAATTTACCCCACAAGTTCTTGTGGGTAGAAGAAGTAGATGTAAACGATTGTAAAGACGATGTAAAAACATTACTCTATTAA
Protein Sequence MDSRTGESLSHAQTMRAVEFFDNPMSVGRTAPFYLKCLYAHQSVAGRTILKFQLQVNHRERKQLGFHKIFLQFRIITTRLTGVIHSWTGILTRLKWRICNELSSLGYLSLYNLVYVIRNLPHKFLWVEEVDVNDCKDDVKTLLY

NCBI Accession YP_009506496.1
Location 168-611
Protein Name AC2
Coding Region ATGTCAGAAGCCCATTCTGGAGACAAGAGGAAGGCGCCAATTCAGGAACCAATTCACGCAGCGGCTAAAAAAAAACACCGCATACCAGAGCAAAGGACAAGGATAGTGTGGAAGCAGTGCGGCTGTTCCGCTTTCATAACTCCTCAGTGCAAATACCAGAATGGATTCACGCACTGGGGAATCACTAAGTCATGCACAGACTATGAGAGCAGTCGAATTCTTCGACAATCCCATGTCTGTGGGTCGGACTGCTCCGTTCTACCTCAAGTGTTTATACGCCCACCAGAGCGTAGCGGGGAGAACAATCCTCAAGTTCCAGCTGCAAGTGAACCACAGGGAGAGGAAGCAACTGGGATTCCACAAGATCTTTCTCCAATTCAGGATAATTACAACCCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAA
Protein Sequence MSEAHSGDKRKAPIQEPIHAAAKKKHRIPEQRTRIVWKQCGCSAFITPQCKYQNGFTHWGITKSCTDYESSRILRQSHVCGSDCSVLPQVFIRPPERSGENNPQVPAASEPQGEEATGIPQDLSPIQDNYNPSDWCYSQLDWYFDTP

NCBI Accession YP_009506497.1
Location 734-1597
Protein Name AC1
Coding Region ATGGCAGCTCCTAAACGGTTTAGAGTTTCTTCTAAAAATTATTTTATTACTTATCCACGATGTTCTCTCTCTAAAGAAGATGCTTTAGAGCAAATACTGAAAATAAACACACCCACAAACAAAAAATATATCCACATAGCCAGAGAACTTCACGAGGATGGGGAACCTCATCTCCACATGCTGGTGCAGTTCGAAGGCAAATTCGTCTGCACAAATAGCAGATTCTTCGACCTGGTATCACCATACAGGTCATCTCATTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACGTCGAGAAGGACGGGGATACTCTCAACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAATGACGCGGCAGCAGAGGCCTTAAATTCCGGCAGCAAGGAGGCTGCATTACAAATAATAAGGGGGAAACTCCCAGAAAAATTTATTTTTCAATATCATAATTTAGTTGGTAATTTAGATAGGATTTTTTCTCCTCCTCCTGCTGTATATTCTTCTCCTTTTTCTTCTTCTTCTTTTAATAATGTACCTGATATTATCAGCAATTGGGCTGCTGATAACATCATGGATGCCGCTGCGCGGCCAGATAGGCCCATTAGTATAGTTATAGAAGGCCCAAGTAGGATAGGTAAAACAGTTTGGGCTAGGTCTCTTGGGCCACACAATTATTTGTGTGGGCACTTGGATCTGAGTCCAAGAGTGTACAGTAATAGTGCTTGGTACAACGTCATTGATGACGTCGACCCCCAAAGAATTCATTGGGGCCCAAAGAGACTGGCAATCAAACACAAAGTACGGGAAGCCAGTTCAAATTAA
Protein Sequence MAAPKRFRVSSKNYFITYPRCSLSKEDALEQILKINTPTNKKYIHIARELHEDGEPHLHMLVQFEGKFVCTNSRFFDLVSPYRSSHFHPNIQGAKSSSDVKSYVEKDGDTLNWGEFQIDGRSARGGQQTANDAAAEALNSGSKEAALQIIRGKLPEKFIFQYHNLVGNLDRIFSPPPAVYSSPFSSSSFNNVPDIISNWAADNIMDAAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPRVYSNSAWYNVIDDVDPQRIHWGPKRLAIKHKVREASSN

NCBI Accession YP_009506498.1
Location 1183-1440
Protein Name AC4
Coding Region ATGGGGAACCTCATCTCCACATGCTGGTGCAGTTCGAAGGCAAATTCGTCTGCACAAATAGCAGATTCTTCGACCTGGTATCACCATACAGGTCATCTCATTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACGTCGAGAAGGACGGGGATACTCTCAACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAATGACGCGGCAGCAGAGGCCTTAA
Protein Sequence MGNLISTCWCSSKANSSAQIADSSTWYHHTGHLIFTPTSRELNPAPMSSPTSRRTGILSTGVNSRSTADLLEEVSRLLMTRQQRP

NCBI Accession YP_009506499.1
Location 1841-2182
Protein Name AV2
Coding Region ATGGATTTGTGGGACCCGCTTCAGAACCCTCTCCCAGATACCTTATACGGTTTTCGGTGTATGCTTTCTGTAAAATACCTGCAAAGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGCTCTGATCTCATCCGCATACTGCGTGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGA
Protein Sequence MDLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYEPGTLGFELCSDLIRILRVKQYGRANSRFSEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFSKRPDEEKEG

NCBI Accession YP_009506500.1
Location 2007-2771
Protein Name AV1
Coding Region ATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGATCGCATCCCAAAGGGATGTGTGGGTCCCTGTAAGGTACAGGACTATGAGTTCAAGATGGATGTCCCGCACAGTGGTACCTTTGTATGTGTGTCTGATTTCACTAGGGGAACTGGGCTTACCCATCGATTGGGTAAGAGGGTGTGTGTTAAGTCCATGGGCATTGATGGTAAGGTCTGGATGGACGACAATGTCGCCAAACGAGACCACACCAACATCATCACTTACTGGTTGATCCGTGATAGGAGGCCCAATAAGGATCCATTAACGTTTAGTCAGGCCTTTACTATGTATGATAATGAGCCCACTACAGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAGGTATTGAAGAAATTCTCTGTAACTGTTTCTGGTGGGCCTTATAACCACAAGGAACAGGCATTAGTTAGGAAGTTTTTTAAGGGTTTGTATAACCATGTTACGTACAACCATAAGGAGGAAGCTAAGTATGAAAATCATTTAGAGAATGCTTTGATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTATATCAGACTCTGCGTTGTAGGGCTTATTTTTATGATTCACACAATAATTAA
Protein Sequence MVGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKRVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN

References More References in PubMed

1

C4 Protein of Sweet Potato Leaf Curl Virus Regulates Brassinosteroid Signaling Pathway through Interaction with AtBIN2 and Affects Male Fertility in Arabidopsis.

Bi H, et al.  Front Plant Sci. 2017 Sep 27;8:1689. doi: 10.3389/fpls.2017.01689. eCollection 2017.

PMID: 29021807
2

First Report of Sweet potato leaf curl virus in China.

Luan YS, et al.  Plant Dis. 2006 Aug;90(8):1111. doi: 10.1094/PD-90-1111C.

PMID: 30781325
3

Molecular characterization of sweet potato leaf curl virus isolate from China (SPLCV-CN) and its phylogenetic relationship with other members of the Geminiviridae.

Luan YS, et al.  Virus Genes. 2007 Oct;35(2):379-85. doi: 10.1007/s11262-007-0084-1. Epub 2007 Feb 21.

PMID: 17318425
4

Diversity of Sweepoviruses Infecting Sweet Potato in China.

Liu Q, et al.  Plant Dis. 2017 Dec;101(12):2098-2103. doi: 10.1094/PDIS-04-17-0524-RE. Epub 2017 Oct 9.

PMID: 30677378
5

First Report of Sweet potato leaf curl Georgia virus Infecting Tall Morning Glory (Ipomoea purpurea) in China.

Zhang SB, et al.  Plant Dis. 2014 Nov;98(11):1588. doi: 10.1094/PDIS-11-13-1161-PDN.

PMID: 30699798
6

First Report of Sweet potato leaf curl Georgia virus on Sweet Potato in China.

Qin Y, et al.  Plant Dis. 2013 Oct;97(10):1388. doi: 10.1094/PDIS-10-12-0967-PDN.

PMID: 30722158
7

Occurrence of Sweet potato feathery mottle virus and Sweet potato leaf curl Georgia virus on Sweet Potato in India.

Prasanth G, et al.  Plant Dis. 2008 Feb;92(2):311. doi: 10.1094/PDIS-92-2-0311B.

PMID: 30769415
8

Molecular characterization and an infectious clone construction of sweet potato leaf curl virus (SPLCV) isolated from Korea.

Choi E, et al.  Acta Virol. 2012;56(3):187-98. doi: 10.4149/av_2012_03_187.

PMID: 23043598
9

First Report of Potato Virus H on Solanum muricatum in China.

Abouelnasr H, et al.  Plant Dis. 2014 Jul;98(7):1016. doi: 10.1094/PDIS-01-14-0024-PDN.

PMID: 30708895
10

Distinct tomato yellow leaf curl Chuxiong virus isolated from whiteflies and plants in China and its symptom determinant and suppressor of post-transcriptional gene silencing.

Xie Y, et al.  Virology. 2024 Jun;594:110040. doi: 10.1016/j.virol.2024.110040. Epub 2024 Mar 5.

PMID: 38471198