Sweet potato leaf curl China virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_002823565.1 |
| Isolate |
China |
| Release date |
2018/8/25 |
| Submitter |
Luan,Y.S., Zhang,J., Liu,D.M., Li,W.L., Luan,Y. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAAAATTGTTCTTTCATTAATAGAGTAATGTTTTTACATCGTCTTTACAATCGTTTACATCTACTTCTTCTACCCACAAGAACTTGTGGGGTAAATTCCTAATTACATAAACTAAGTTATACAATGATAAATAACCTAAACTACTTAACTCATTACAAATTCGCCATTTAAGGCGTGTCAAAATACCAGTCCAACTGTGAATAACACCAGTCAGACGGGTTGTAATTATCCTGAATTGGAGAAAGATCTTGTGGAATCCCAGTTGCTTCCTCTCCCTGTGGTTCACTTGCAGCTGGAACTTGAGGATTGTTCTCCCCGCTACGCTCTGGTGGGCGTATAAACACTTGAGGTAGAACGGAGCAGTCCGACCCACAGACATGGGATTGTCGAAGAATTCGACTGCTCTCATAGTCTGTGCATGACTTAGTGATTCCCCAGTGCGTGAATCCATTCTGGTATTTGCACTGAGGAGTTATGAAAGCGGAACAGCCGCACTGCTTCCACACTATCCTTGTCCTTTGCTCTGGTATGCGGTGTTTTTTTTTAGCCGCTGCGTGAATTGGTTCCTGAATTGGCGCCTTCCTCTTGTCTCCAGAATGGGCTTCTGACATTACAGAATATGGTGTTCTTGCAAGCCCACTGTCTCAGTGCGTCTTGTTCTGGCTTATCTAGCCAGGATTTAAATGAGGATCCTTCGCCTGGATTGCAGAGGAAGATAGTGGATATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTGCCAGTCTCTTTGGGCCCCAATGAATTCTTTGGGGGTCGACGTCATCAATGACGTTGTACCAAGCACTATTACTGTACACTCTTGGACTCAGATCCAAGTGCCCACACAAATAATTGTGTGGCCCAAGAGACCTAGCCCAAACTGTTTTACCTATCCTACTTGGGCCTTCTATAACTATACTAATGGGCCTATCTGGCCGCGCAGCGGCATCCATGATGTTATCAGCAGCCCAATTGCTGATAATATCAGGTACATTATTAAAAGAAGAAGAAGAAAAAGGAGAAGAATATACAGCAGGAGGAGGAGAAAAAATCCTATCTAAATTACCAACTAAATTATGATATTGAAAAATAAATTTTTCTGGGAGTTTCCCCCTTATTATTTGTAATGCAGCCTCCTTGCTGCCGGAATTTAAGGCCTCTGCTGCCGCGTCATTAGCAGTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCACCCCAGTTGAGAGTATCCCCGTCCTTCTCGACGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGGATGTTGGGGTGAAAATGAGATGACCTGTATGGTGATACCAGGTCGAAGAATCTGCTATTTGTGCAGACGAATTTGCCTTCGAACTGCACCAGCATGTGGAGATGAGGTTCCCCATCCTCGTGAAGTTCTCTGGCTATGTGGATATATTTTTTGTTTGTGGGTGTGTTTATTTTCAGTATTTGCTCTAAAGCATCTTCTTTAGAGAGAGAACATCGTGGATAAGTAATAAAATAATTTTTAGAAGAAACTCTAAACCGTTTAGGAGCTGCCATCTGTATTGGTGACAATCCAAACTTGCTGAATGAATTGGTGACTGGTGACAATTTATACTATGTCACCAAATGGCATTATGGTAATTTGAACAACTTTAATTTGAATTCGAAAATGCTATTGGTCCGCCAAAAAGCGGGCACCGTATTAATATTACCGGTGCCCGCGCCTCCCTTTTAATGTGGACCCCACACGCTTTACTTTAATTATTAAAGACGTGCCTGTTGCAGACTTGGTCGCCAAGAATGGATTTGTGGGACCCGCTTCAGAACCCTCTCCCAGATACCTTATACGGTTTTCGGTGTATGCTTTCTGTAAAATACCTGCAAAGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGCTCTGATCTCATCCGCATACTGCGTGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGATCGCATCCCAAAGGGATGTGTGGGTCCCTGTAAGGTACAGGACTATGAGTTCAAGATGGATGTCCCGCACAGTGGTACCTTTGTATGTGTGTCTGATTTCACTAGGGGAACTGGGCTTACCCATCGATTGGGTAAGAGGGTGTGTGTTAAGTCCATGGGCATTGATGGTAAGGTCTGGATGGACGACAATGTCGCCAAACGAGACCACACCAACATCATCACTTACTGGTTGATCCGTGATAGGAGGCCCAATAAGGATCCATTAACGTTTAGTCAGGCCTTTACTATGTATGATAATGAGCCCACTACAGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAGGTATTGAAGAAATTCTCTGTAACTGTTTCTGGTGGGCCTTATAACCACAAGGAACAGGCATTAGTTAGGAAGTTTTTTAAGGGTTTGTATAACCATGTTACGTACAACCATAAGGAGGAAGCTAAGTATGAAAATCATTTAGAGAATGCTTTGATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTATATCAGACTCTGCGTTGTAGGGCTTATTTTTATGATTCACACAATAATTAA
Gene Information
|
NCBI Accession
|
YP_009506495.1
|
|
Location
|
17-451 |
|
Protein Name
|
AC3 |
|
Coding Region
|
ATGGATTCACGCACTGGGGAATCACTAAGTCATGCACAGACTATGAGAGCAGTCGAATTCTTCGACAATCCCATGTCTGTGGGTCGGACTGCTCCGTTCTACCTCAAGTGTTTATACGCCCACCAGAGCGTAGCGGGGAGAACAATCCTCAAGTTCCAGCTGCAAGTGAACCACAGGGAGAGGAAGCAACTGGGATTCCACAAGATCTTTCTCCAATTCAGGATAATTACAACCCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAAATGGCGAATTTGTAATGAGTTAAGTAGTTTAGGTTATTTATCATTGTATAACTTAGTTTATGTAATTAGGAATTTACCCCACAAGTTCTTGTGGGTAGAAGAAGTAGATGTAAACGATTGTAAAGACGATGTAAAAACATTACTCTATTAA |
|
Protein Sequence
|
MDSRTGESLSHAQTMRAVEFFDNPMSVGRTAPFYLKCLYAHQSVAGRTILKFQLQVNHRERKQLGFHKIFLQFRIITTRLTGVIHSWTGILTRLKWRICNELSSLGYLSLYNLVYVIRNLPHKFLWVEEVDVNDCKDDVKTLLY |
|
NCBI Accession
|
YP_009506496.1
|
|
Location
|
168-611 |
|
Protein Name
|
AC2 |
|
Coding Region
|
ATGTCAGAAGCCCATTCTGGAGACAAGAGGAAGGCGCCAATTCAGGAACCAATTCACGCAGCGGCTAAAAAAAAACACCGCATACCAGAGCAAAGGACAAGGATAGTGTGGAAGCAGTGCGGCTGTTCCGCTTTCATAACTCCTCAGTGCAAATACCAGAATGGATTCACGCACTGGGGAATCACTAAGTCATGCACAGACTATGAGAGCAGTCGAATTCTTCGACAATCCCATGTCTGTGGGTCGGACTGCTCCGTTCTACCTCAAGTGTTTATACGCCCACCAGAGCGTAGCGGGGAGAACAATCCTCAAGTTCCAGCTGCAAGTGAACCACAGGGAGAGGAAGCAACTGGGATTCCACAAGATCTTTCTCCAATTCAGGATAATTACAACCCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAA |
|
Protein Sequence
|
MSEAHSGDKRKAPIQEPIHAAAKKKHRIPEQRTRIVWKQCGCSAFITPQCKYQNGFTHWGITKSCTDYESSRILRQSHVCGSDCSVLPQVFIRPPERSGENNPQVPAASEPQGEEATGIPQDLSPIQDNYNPSDWCYSQLDWYFDTP |
|
NCBI Accession
|
YP_009506497.1
|
|
Location
|
734-1597 |
|
Protein Name
|
AC1 |
|
Coding Region
|
ATGGCAGCTCCTAAACGGTTTAGAGTTTCTTCTAAAAATTATTTTATTACTTATCCACGATGTTCTCTCTCTAAAGAAGATGCTTTAGAGCAAATACTGAAAATAAACACACCCACAAACAAAAAATATATCCACATAGCCAGAGAACTTCACGAGGATGGGGAACCTCATCTCCACATGCTGGTGCAGTTCGAAGGCAAATTCGTCTGCACAAATAGCAGATTCTTCGACCTGGTATCACCATACAGGTCATCTCATTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACGTCGAGAAGGACGGGGATACTCTCAACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAATGACGCGGCAGCAGAGGCCTTAAATTCCGGCAGCAAGGAGGCTGCATTACAAATAATAAGGGGGAAACTCCCAGAAAAATTTATTTTTCAATATCATAATTTAGTTGGTAATTTAGATAGGATTTTTTCTCCTCCTCCTGCTGTATATTCTTCTCCTTTTTCTTCTTCTTCTTTTAATAATGTACCTGATATTATCAGCAATTGGGCTGCTGATAACATCATGGATGCCGCTGCGCGGCCAGATAGGCCCATTAGTATAGTTATAGAAGGCCCAAGTAGGATAGGTAAAACAGTTTGGGCTAGGTCTCTTGGGCCACACAATTATTTGTGTGGGCACTTGGATCTGAGTCCAAGAGTGTACAGTAATAGTGCTTGGTACAACGTCATTGATGACGTCGACCCCCAAAGAATTCATTGGGGCCCAAAGAGACTGGCAATCAAACACAAAGTACGGGAAGCCAGTTCAAATTAA |
|
Protein Sequence
|
MAAPKRFRVSSKNYFITYPRCSLSKEDALEQILKINTPTNKKYIHIARELHEDGEPHLHMLVQFEGKFVCTNSRFFDLVSPYRSSHFHPNIQGAKSSSDVKSYVEKDGDTLNWGEFQIDGRSARGGQQTANDAAAEALNSGSKEAALQIIRGKLPEKFIFQYHNLVGNLDRIFSPPPAVYSSPFSSSSFNNVPDIISNWAADNIMDAAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPRVYSNSAWYNVIDDVDPQRIHWGPKRLAIKHKVREASSN |
|
NCBI Accession
|
YP_009506498.1
|
|
Location
|
1183-1440 |
|
Protein Name
|
AC4 |
|
Coding Region
|
ATGGGGAACCTCATCTCCACATGCTGGTGCAGTTCGAAGGCAAATTCGTCTGCACAAATAGCAGATTCTTCGACCTGGTATCACCATACAGGTCATCTCATTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACGTCGAGAAGGACGGGGATACTCTCAACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAATGACGCGGCAGCAGAGGCCTTAA |
|
Protein Sequence
|
MGNLISTCWCSSKANSSAQIADSSTWYHHTGHLIFTPTSRELNPAPMSSPTSRRTGILSTGVNSRSTADLLEEVSRLLMTRQQRP |
|
NCBI Accession
|
YP_009506499.1
|
|
Location
|
1841-2182 |
|
Protein Name
|
AV2 |
|
Coding Region
|
ATGGATTTGTGGGACCCGCTTCAGAACCCTCTCCCAGATACCTTATACGGTTTTCGGTGTATGCTTTCTGTAAAATACCTGCAAAGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGCTCTGATCTCATCCGCATACTGCGTGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGA |
|
Protein Sequence
|
MDLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYEPGTLGFELCSDLIRILRVKQYGRANSRFSEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFSKRPDEEKEG |
|
NCBI Accession
|
YP_009506500.1
|
|
Location
|
2007-2771 |
|
Protein Name
|
AV1 |
|
Coding Region
|
ATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGATCGCATCCCAAAGGGATGTGTGGGTCCCTGTAAGGTACAGGACTATGAGTTCAAGATGGATGTCCCGCACAGTGGTACCTTTGTATGTGTGTCTGATTTCACTAGGGGAACTGGGCTTACCCATCGATTGGGTAAGAGGGTGTGTGTTAAGTCCATGGGCATTGATGGTAAGGTCTGGATGGACGACAATGTCGCCAAACGAGACCACACCAACATCATCACTTACTGGTTGATCCGTGATAGGAGGCCCAATAAGGATCCATTAACGTTTAGTCAGGCCTTTACTATGTATGATAATGAGCCCACTACAGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAGGTATTGAAGAAATTCTCTGTAACTGTTTCTGGTGGGCCTTATAACCACAAGGAACAGGCATTAGTTAGGAAGTTTTTTAAGGGTTTGTATAACCATGTTACGTACAACCATAAGGAGGAAGCTAAGTATGAAAATCATTTAGAGAATGCTTTGATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTATATCAGACTCTGCGTTGTAGGGCTTATTTTTATGATTCACACAATAATTAA |
|
Protein Sequence
|
MVGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKRVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN |