Sweet potato leaf curl Canary virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000884435.1
Isolate Spain
Release date 2015/2/22
Submitter Lozano,G., Trenado,H.P., Valverde,R.A., Navas-Castillo,J.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_013465
ACCGGTGCCCGCCGCGCCCCCTTTTGTGGGCCCCACAAAGAATGATGACATTGCTTTATAAGGACCAATCAGGTTGCCGTGCTTGGCGCCCAAGTATGGCTGAAATGTGGGACCCTCTTCAGAACCCACTACCAGATACTTTATACGGTTTCAGGTGTATGCTTTCCGTTAAATACCTACAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCTAAGGGATGTGTTGGTCCCTGTAAGATCCAGGACTATGAGTTCAAAATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACAGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTATTAAGTCCATGGGTATAGATGGGAAGGTATGGATGGATGACAATGTGGCTAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGATAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACTATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAAGTCTTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAACAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAGAATCAGTTAGAGAATGCTTTGATGTTGTATAGTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAATAAACTTTTATTTTATTAATACATTAATACCTTTACATCATCATTGCAGTCTACATTATCTATTTCATCTATCCAAGAACATACTCTTGGAAGATATCTAATAACAAAAACTAAATTAACTAAACTAAAAAAACCCAAATTTGCTATTTCATTACATATGCGCCATTTAAGGCGTTCCAAAATACCAGTCCAACTGTGAATAGCACCAGTTAGACGGGTCGTCAAGATCCGGAATTGGAGGAATATCTTGTGGAATCCCAGTTGCCTCCTTTCCCTGTAGTTGACTCTCAGCTGGAATTTGAGGATGGTTCTCCCCTGTGTGCTCTCGTGGACATACATAATTCTGAGATGGAATGGTGCAGTCCGACCCACAGACATGGGGTTGGTGTCGAATTCGACTGCTCTCGTAGTCTGAGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCAGGTTGTGGTGATGAAGGCTGAACAGCCGCAACCCTTCCACACTATCCTTGTCCTTGGTTCAGGAGCTTTCCTCTTGGCCTTCTTCGCTGCTGCGTGTGATGGCTCCTGCTCCGGACACTTCCTCTTGTACCCAGAAAGGGGATTGGACATCGCAGAATATTGCGTTCTTTAATGCCCAATTCTTTAGAGCTTCTTGTTCTGGTTTATCTAACCAGAGTTTAAATGAAGAGCCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTATTTACAGTTTGATTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTATACTTTTGGGCTTAGATCTAAATGCCCACACAAATAATTGTGAGGGCCCAAAGACCTGGCCCACACTGTTTTGCCTATTCTGCTTGGGCCTTCAATAACAATTGATATAGGTCTATCCGGCCGCGCAGCGGAATCCATGACATTTTCAGCGGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGAAGAAGAAGAAAAAGGGGAACAATATACAGCAGGAGGAGGAGAAAAAATCCTATCTAAATTTGAAACTAAATTATGATATTGAAAAATATATTTTTCAGGGAGTTTCTCCCTTATTATTTGTAACGCAGCTTCTTTAGAACCTGCGTTTAATGCCTCTGCGGCAGCGTCGTTAGCAGTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCACCCCAGTCGAGGTAGTCTCCGTCCTTCTCGATGTATGACTTGACATCCGAGGAGGACTTAGCTGCCTGGAAATTTGGATGGAATTGGGAGGAGTTATGTGGATGATGTAGGTCGAAATGTCGTGGGTTTTTGAACTCTGCTTTCCCCTTGAACTGGATGAGAACATGGAGATGCAATGACCCATCTTGGTGTTTCTCTTGGCTAACTCTGATAAACAGTTTATCCGACGGGCAATGGGTGGCCCTTAATTGCTCAAGCGCTTGCTCTTTAGATAAAGAACATTTGGGGTATGTTAAGAAAATATTTTTGGCTTGGACTCTAAACCCTTGCTTACGTGGCATTTTGAATCGGAGGCTCTCAAAGCTCTACGGAATTGGAGGATTTGGAGGACTATATATAGTGAGCCTCCAAATGACATTTTGGTAATTTAGAAGATCCTTTTACCTTTAATTCAAATTCCGACATGTCTGGGACCACCAAAAGGCGGGCACCGTATTAATATT

Gene Information

NCBI Accession YP_003288769.1
Location 42-440
Gene Name V2
Protein Name MP
Coding Region ATGATGACATTGCTTTATAAGGACCAATCAGGTTGCCGTGCTTGGCGCCCAAGTATGGCTGAAATGTGGGACCCTCTTCAGAACCCACTACCAGATACTTTATACGGTTTCAGGTGTATGCTTTCCGTTAAATACCTACAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGA
Protein Sequence MMTLLYKDQSGCRAWRPSMAEMWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG

NCBI Accession YP_003288770.1
Location 265-1029
Gene Name V1
Protein Name CP
Coding Region ATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCTAAGGGATGTGTTGGTCCCTGTAAGATCCAGGACTATGAGTTCAAAATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACAGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTATTAAGTCCATGGGTATAGATGGGAAGGTATGGATGGATGACAATGTGGCTAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGATAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACTATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAAGTCTTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAACAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAGAATCAGTTAGAGAATGCTTTGATGTTGTATAGTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAA
Protein Sequence MTGRIRVSPRYHPYGGRQVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVRMKRRRGDRIPKGCVGPCKIQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN

NCBI Accession YP_003288771.1
Location 1045-1479
Gene Name C3
Protein Name C3
Coding Region ATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCATCTCAGAATTATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGAGTCAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATATTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAAATGGCGCATATGTAATGAAATAGCAAATTTGGGTTTTTTTAGTTTAGTTAATTTAGTTTTTGTTATTAGATATCTTCCAAGAGTATGTTCTTGGATAGATGAAATAGATAATGTAGACTGCAATGATGATGTAAAGGTATTAATGTATTAA
Protein Sequence MDSRTGESLSHAQTTRAVEFDTNPMSVGRTAPFHLRIMYVHESTQGRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNEIANLGFFSLVNLVFVIRYLPRVCSWIDEIDNVDCNDDVKVLMY

NCBI Accession YP_003288772.1
Location 1196-1642
Gene Name C2
Protein Name C2
Coding Region ATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCGGAGCAGGAGCCATCACACGCAGCAGCGAAGAAGGCCAAGAGGAAAGCTCCTGAACCAAGGACAAGGATAGTGTGGAAGGGTTGCGGCTGTTCAGCCTTCATCACCACAACCTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCATCTCAGAATTATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGAGTCAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATATTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAA
Protein Sequence MSNPLSGYKRKCPEQEPSHAAAKKAKRKAPEPRTRIVWKGCGCSAFITTTCKYQHGFTHRGITKSCSDYESSRIRHQPHVCGSDCTIPSQNYVCPREHTGENHPQIPAESQLQGKEATGIPQDIPPIPDLDDPSNWCYSQLDWYFGTP

NCBI Accession YP_003288773.1
Location 1551-2645
Gene Name C1
Protein Name REP
Coding Region ATGCCACGTAAGCAAGGGTTTAGAGTCCAAGCCAAAAATATTTTCTTAACATACCCCAAATGTTCTTTATCTAAAGAGCAAGCGCTTGAGCAATTAAGGGCCACCCATTGCCCGTCGGATAAACTGTTTATCAGAGTTAGCCAAGAGAAACACCAAGATGGGTCATTGCATCTCCATGTTCTCATCCAGTTCAAGGGGAAAGCAGAGTTCAAAAACCCACGACATTTCGACCTACATCATCCACATAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCTAAGTCCTCCTCGGATGTCAAGTCATACATCGAGAAGGACGGAGACTACCTCGACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAACGACGCTGCCGCAGAGGCATTAAACGCAGGTTCTAAAGAAGCTGCGTTACAAATAATAAGGGAGAAACTCCCTGAAAAATATATTTTTCAATATCATAATTTAGTTTCAAATTTAGATAGGATTTTTTCTCCTCCTCCTGCTGTATATTGTTCCCCTTTTTCTTCTTCTTCTTTCAATAATGTTCCTGACATTATCAGCGATTGGGCCGCTGAAAATGTCATGGATTCCGCTGCGCGGCCGGATAGACCTATATCAATTGTTATTGAAGGCCCAAGCAGAATAGGCAAAACAGTGTGGGCCAGGTCTTTGGGCCCTCACAATTATTTGTGTGGGCATTTAGATCTAAGCCCAAAAGTATACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAATCAAACTGTAAATACGGGAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGCTCTTCATTTAAACTCTGGTTAGATAAACCAGAACAAGAAGCTCTAAAGAATTGGGCATTAAAGAACGCAATATTCTGCGATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCGGAGCAGGAGCCATCACACGCAGCAGCGAAGAAGGCCAAGAGGAAAGCTCCTGA
Protein Sequence MPRKQGFRVQAKNIFLTYPKCSLSKEQALEQLRATHCPSDKLFIRVSQEKHQDGSLHLHVLIQFKGKAEFKNPRHFDLHHPHNSSQFHPNFQAAKSSSDVKSYIEKDGDYLDWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYIFQYHNLVSNLDRIFSPPPAVYCSPFSSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWALKNAIFCDVQSPFWVQEEVSGAGAITRSSEEGQEESS

NCBI Accession YP_003288774.1
Location 2231-2488
Gene Name C4
Protein Name C4
Coding Region ATGGGTCATTGCATCTCCATGTTCTCATCCAGTTCAAGGGGAAAGCAGAGTTCAAAAACCCACGACATTTCGACCTACATCATCCACATAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCTAAGTCCTCCTCGGATGTCAAGTCATACATCGAGAAGGACGGAGACTACCTCGACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAACGACGCTGCCGCAGAGGCATTAA
Protein Sequence MGHCISMFSSSSRGKQSSKTHDISTYIIHITPPNSIQISRQLSPPRMSSHTSRRTETTSTGVNSRSTADLLEEVSRLLTTLPQRH

References More References in PubMed

1

Diversity of Sweepoviruses Infecting Sweet Potato in China.

Liu Q, et al.  Plant Dis. 2017 Dec;101(12):2098-2103. doi: 10.1094/PDIS-04-17-0524-RE. Epub 2017 Oct 9.

PMID: 30677378
2

Revealing the Complexity of Sweepovirus-Deltasatellite-Plant Host Interactions: Expanded Natural and Experimental Helper Virus Range and Effect Dependence on Virus-Host Combination.

Ferro CG, et al.  Microorganisms. 2021 May 10;9(5):1018. doi: 10.3390/microorganisms9051018.

PMID: 34068583
3

Sweepoviruses cause disease in sweet potato and related Ipomoea spp.: fulfilling Koch's postulates for a divergent group in the genus begomovirus.

Trenado HP, et al.  PLoS One. 2011;6(11):e27329. doi: 10.1371/journal.pone.0027329. Epub 2011 Nov 2.

PMID: 22073314