Sweet potato leaf curl Canary virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000884435.1 |
| Isolate |
Spain |
| Release date |
2015/2/22 |
| Submitter |
Lozano,G., Trenado,H.P., Valverde,R.A., Navas-Castillo,J. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGTGCCCGCCGCGCCCCCTTTTGTGGGCCCCACAAAGAATGATGACATTGCTTTATAAGGACCAATCAGGTTGCCGTGCTTGGCGCCCAAGTATGGCTGAAATGTGGGACCCTCTTCAGAACCCACTACCAGATACTTTATACGGTTTCAGGTGTATGCTTTCCGTTAAATACCTACAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCTAAGGGATGTGTTGGTCCCTGTAAGATCCAGGACTATGAGTTCAAAATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACAGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTATTAAGTCCATGGGTATAGATGGGAAGGTATGGATGGATGACAATGTGGCTAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGATAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACTATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAAGTCTTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAACAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAGAATCAGTTAGAGAATGCTTTGATGTTGTATAGTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAATAAACTTTTATTTTATTAATACATTAATACCTTTACATCATCATTGCAGTCTACATTATCTATTTCATCTATCCAAGAACATACTCTTGGAAGATATCTAATAACAAAAACTAAATTAACTAAACTAAAAAAACCCAAATTTGCTATTTCATTACATATGCGCCATTTAAGGCGTTCCAAAATACCAGTCCAACTGTGAATAGCACCAGTTAGACGGGTCGTCAAGATCCGGAATTGGAGGAATATCTTGTGGAATCCCAGTTGCCTCCTTTCCCTGTAGTTGACTCTCAGCTGGAATTTGAGGATGGTTCTCCCCTGTGTGCTCTCGTGGACATACATAATTCTGAGATGGAATGGTGCAGTCCGACCCACAGACATGGGGTTGGTGTCGAATTCGACTGCTCTCGTAGTCTGAGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCAGGTTGTGGTGATGAAGGCTGAACAGCCGCAACCCTTCCACACTATCCTTGTCCTTGGTTCAGGAGCTTTCCTCTTGGCCTTCTTCGCTGCTGCGTGTGATGGCTCCTGCTCCGGACACTTCCTCTTGTACCCAGAAAGGGGATTGGACATCGCAGAATATTGCGTTCTTTAATGCCCAATTCTTTAGAGCTTCTTGTTCTGGTTTATCTAACCAGAGTTTAAATGAAGAGCCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTATTTACAGTTTGATTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTATACTTTTGGGCTTAGATCTAAATGCCCACACAAATAATTGTGAGGGCCCAAAGACCTGGCCCACACTGTTTTGCCTATTCTGCTTGGGCCTTCAATAACAATTGATATAGGTCTATCCGGCCGCGCAGCGGAATCCATGACATTTTCAGCGGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGAAGAAGAAGAAAAAGGGGAACAATATACAGCAGGAGGAGGAGAAAAAATCCTATCTAAATTTGAAACTAAATTATGATATTGAAAAATATATTTTTCAGGGAGTTTCTCCCTTATTATTTGTAACGCAGCTTCTTTAGAACCTGCGTTTAATGCCTCTGCGGCAGCGTCGTTAGCAGTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCACCCCAGTCGAGGTAGTCTCCGTCCTTCTCGATGTATGACTTGACATCCGAGGAGGACTTAGCTGCCTGGAAATTTGGATGGAATTGGGAGGAGTTATGTGGATGATGTAGGTCGAAATGTCGTGGGTTTTTGAACTCTGCTTTCCCCTTGAACTGGATGAGAACATGGAGATGCAATGACCCATCTTGGTGTTTCTCTTGGCTAACTCTGATAAACAGTTTATCCGACGGGCAATGGGTGGCCCTTAATTGCTCAAGCGCTTGCTCTTTAGATAAAGAACATTTGGGGTATGTTAAGAAAATATTTTTGGCTTGGACTCTAAACCCTTGCTTACGTGGCATTTTGAATCGGAGGCTCTCAAAGCTCTACGGAATTGGAGGATTTGGAGGACTATATATAGTGAGCCTCCAAATGACATTTTGGTAATTTAGAAGATCCTTTTACCTTTAATTCAAATTCCGACATGTCTGGGACCACCAAAAGGCGGGCACCGTATTAATATT
Gene Information
|
NCBI Accession
|
YP_003288769.1
|
|
Location
|
42-440 |
|
Gene Name
|
V2 |
|
Protein Name
|
MP |
|
Coding Region
|
ATGATGACATTGCTTTATAAGGACCAATCAGGTTGCCGTGCTTGGCGCCCAAGTATGGCTGAAATGTGGGACCCTCTTCAGAACCCACTACCAGATACTTTATACGGTTTCAGGTGTATGCTTTCCGTTAAATACCTACAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGA |
|
Protein Sequence
|
MMTLLYKDQSGCRAWRPSMAEMWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG |
|
NCBI Accession
|
YP_003288770.1
|
|
Location
|
265-1029 |
|
Gene Name
|
V1 |
|
Protein Name
|
CP |
|
Coding Region
|
ATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCTAAGGGATGTGTTGGTCCCTGTAAGATCCAGGACTATGAGTTCAAAATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACAGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTATTAAGTCCATGGGTATAGATGGGAAGGTATGGATGGATGACAATGTGGCTAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGATAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACTATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAAGTCTTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAACAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAGAATCAGTTAGAGAATGCTTTGATGTTGTATAGTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAA |
|
Protein Sequence
|
MTGRIRVSPRYHPYGGRQVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVRMKRRRGDRIPKGCVGPCKIQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN |
|
NCBI Accession
|
YP_003288771.1
|
|
Location
|
1045-1479 |
|
Gene Name
|
C3 |
|
Protein Name
|
C3 |
|
Coding Region
|
ATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCATCTCAGAATTATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGAGTCAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATATTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAAATGGCGCATATGTAATGAAATAGCAAATTTGGGTTTTTTTAGTTTAGTTAATTTAGTTTTTGTTATTAGATATCTTCCAAGAGTATGTTCTTGGATAGATGAAATAGATAATGTAGACTGCAATGATGATGTAAAGGTATTAATGTATTAA |
|
Protein Sequence
|
MDSRTGESLSHAQTTRAVEFDTNPMSVGRTAPFHLRIMYVHESTQGRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNEIANLGFFSLVNLVFVIRYLPRVCSWIDEIDNVDCNDDVKVLMY |
|
NCBI Accession
|
YP_003288772.1
|
|
Location
|
1196-1642 |
|
Gene Name
|
C2 |
|
Protein Name
|
C2 |
|
Coding Region
|
ATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCGGAGCAGGAGCCATCACACGCAGCAGCGAAGAAGGCCAAGAGGAAAGCTCCTGAACCAAGGACAAGGATAGTGTGGAAGGGTTGCGGCTGTTCAGCCTTCATCACCACAACCTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCATCTCAGAATTATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGAGTCAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATATTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAA |
|
Protein Sequence
|
MSNPLSGYKRKCPEQEPSHAAAKKAKRKAPEPRTRIVWKGCGCSAFITTTCKYQHGFTHRGITKSCSDYESSRIRHQPHVCGSDCTIPSQNYVCPREHTGENHPQIPAESQLQGKEATGIPQDIPPIPDLDDPSNWCYSQLDWYFGTP |
|
NCBI Accession
|
YP_003288773.1
|
|
Location
|
1551-2645 |
|
Gene Name
|
C1 |
|
Protein Name
|
REP |
|
Coding Region
|
ATGCCACGTAAGCAAGGGTTTAGAGTCCAAGCCAAAAATATTTTCTTAACATACCCCAAATGTTCTTTATCTAAAGAGCAAGCGCTTGAGCAATTAAGGGCCACCCATTGCCCGTCGGATAAACTGTTTATCAGAGTTAGCCAAGAGAAACACCAAGATGGGTCATTGCATCTCCATGTTCTCATCCAGTTCAAGGGGAAAGCAGAGTTCAAAAACCCACGACATTTCGACCTACATCATCCACATAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCTAAGTCCTCCTCGGATGTCAAGTCATACATCGAGAAGGACGGAGACTACCTCGACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAACGACGCTGCCGCAGAGGCATTAAACGCAGGTTCTAAAGAAGCTGCGTTACAAATAATAAGGGAGAAACTCCCTGAAAAATATATTTTTCAATATCATAATTTAGTTTCAAATTTAGATAGGATTTTTTCTCCTCCTCCTGCTGTATATTGTTCCCCTTTTTCTTCTTCTTCTTTCAATAATGTTCCTGACATTATCAGCGATTGGGCCGCTGAAAATGTCATGGATTCCGCTGCGCGGCCGGATAGACCTATATCAATTGTTATTGAAGGCCCAAGCAGAATAGGCAAAACAGTGTGGGCCAGGTCTTTGGGCCCTCACAATTATTTGTGTGGGCATTTAGATCTAAGCCCAAAAGTATACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAATCAAACTGTAAATACGGGAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGCTCTTCATTTAAACTCTGGTTAGATAAACCAGAACAAGAAGCTCTAAAGAATTGGGCATTAAAGAACGCAATATTCTGCGATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCGGAGCAGGAGCCATCACACGCAGCAGCGAAGAAGGCCAAGAGGAAAGCTCCTGA |
|
Protein Sequence
|
MPRKQGFRVQAKNIFLTYPKCSLSKEQALEQLRATHCPSDKLFIRVSQEKHQDGSLHLHVLIQFKGKAEFKNPRHFDLHHPHNSSQFHPNFQAAKSSSDVKSYIEKDGDYLDWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYIFQYHNLVSNLDRIFSPPPAVYCSPFSSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWALKNAIFCDVQSPFWVQEEVSGAGAITRSSEEGQEESS |
|
NCBI Accession
|
YP_003288774.1
|
|
Location
|
2231-2488 |
|
Gene Name
|
C4 |
|
Protein Name
|
C4 |
|
Coding Region
|
ATGGGTCATTGCATCTCCATGTTCTCATCCAGTTCAAGGGGAAAGCAGAGTTCAAAAACCCACGACATTTCGACCTACATCATCCACATAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCTAAGTCCTCCTCGGATGTCAAGTCATACATCGAGAAGGACGGAGACTACCTCGACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAACGACGCTGCCGCAGAGGCATTAA |
|
Protein Sequence
|
MGHCISMFSSSSRGKQSSKTHDISTYIIHITPPNSIQISRQLSPPRMSSHTSRRTETTSTGVNSRSTADLLEEVSRLLTTLPQRH |