Bean white chlorosis mosaic virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000910695.1 |
| Isolate |
Venezuela |
| Release date |
2015/2/22 |
| Submitter |
Fiallo-Olive,E., Marquez-Martin,B., Hassan,I., Chirinos,D.T., Geraud-Pouey,F., Navas-Castillo,J., Moriones,E., Chirinos,D. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTCTGCCCCTCCGCTTTAATTCGAATTAAAGCGTGCTGCTTTCGTTTCGTCCAATGATATTGCGTCTGACGAGCTTAGATATTTGCAACAACTTGGGCGCTAAGTTGTTGGGTCAAGATTATAAATTAAAGCAGCACGGCCCACTGCCTTTAACTCAAAATGCCTAAGCGCGATCTCCCATGGCGCGCAATGCCTGGAACATCAAAGGTTAGTCGCAATGCTAACTACTCTCCACGTGCAGGTGGTGGCTCGAAATTGAGTAGGGCCTCTGAGTGGGTTAACAGGCCCATGTATATGAAGCCCAGGATTTATCGGACGCTGAGGACTCCAGATGTGCCCAGAGGCTGTGAAGGTCCTTGTAAGGTCCAGTCATATGAACAGCGTCACGATATTTCACATGTCGGGAAGGTCATGTGTATCTCTGATGTCACACGTGGCAATGGCATCACCCACCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTTGGTAAGATCTGGATGGATGAGAATATCAAGCTGAAGAACCACACCAACAGCGTTATGTTCTGGCTGGTCAGGGACCGTAGACCGTATGGAACGCCCATGGATTTCGGTCAGGTATTCAACATGTTCGACAACGAGCCCAGCACTGCCACGGTCAAGAACGATCTCCGTGATCGTTATCAAGTTATGCACAAGTTCTATGGTAAGGTGACAGGTGGACAGTATGCAAGTAACGAGCAGGCAATCGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAATCATCAAGAGGCTGGCAAGTATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTTTATGCAACGCTTAAGATTCGAATCTATTTTTATGATTCGATTATGAATTAATAAATTTTGAATTTTATTGAATGATCTTCCACGACATAATTTACATACGATCTGTCTGTTGCGAAACGAACAGCCCTAATTACGTTGTTAATGGAAATAACACCCAATCGATCTAAGTACATATGAACTAAACGCTTAAATCTATTCAAATAAGTCGACCCAGAAGCTGTCAGGGATATCGTCCAGACTTGGAAGTTCAGGTAGGCTTTGTGGAGATCCAATGCTTTCCTGAGGTTGTGGTTGAACCGTATTTGCACGCTGTATATCCTGGTGTTCGTGAAGAGTGGGTCCTCTACCTTGTATAGTTTGAAATAAAGGGGATTTTCTATCTCCCAGATATACACGCCATTCTCCGCCTGAGGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGTCCTGTGCAGCCTATGTGGAAGTATATGGAGCAACCGCACTCCAGATCAATGCGGCGTCGTCTGACTGACCTCTTCTTGGCCTCCCTGTGTTTCTTCTTGATAGAGGGGGGAGTCGAGGGTGATGAAGACCGCATTCTTCAGGGTCCAGTTCCTGATGCCTGTGTTTTCCTCTTTGTTGAGGAAATCTTTATAACTGGCACCCTCACCAGGATTGCAAAGCACGATTGATGGGATCCCTCCTTTAATGACAACTGGCTTGCCGTACTTGCAATTTGACTGCCATTTCTTTTGGGCCCAAAAAAGTTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACATCATCAATGACGTTATACTCCACTTCGTCCGAGTACACTCTGGAATTGAAGTCTAGGTGTCCACTAAGATAATTATGTGGGCCTAATGATCGAGCCCACATCGTCTTTCCTGTTCTTGAATCACCTTCGACTATGAGACTTAATGGTCTTTCTGGCCGCGCAGCGGGACTCTTTCCAAAATAATCATCTGCCCATTCTTGCATCTCGTCGGGAACGTTAGTGAAAGAGGAGAGTGGAAACGGAGGAGTCCATGGCTCCGGAGGCTTTTGGAATATTCTGGTTGCGTTAGCAACCAGGTTGTGATGTTGAAGGAAGAAATGTTGCGGTTGTTCTTCCTTTATTATTTGCAGAGCTGCCTCTGCTGATCCTGCATTTAACGCTTTAGCATATGTGTCGTTAGCAGATTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAACTGTCCCCATTCAACTGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTTGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAGATCGAAGAATCTGTTATTCGTGCACTGGTATTTTCCTTCGAACTGGATGAGCACATGTAGATGAGGTTGCCCATCTTCGTGAAATTCTCTGCAGATCTTGATGAATTTCTTGTTAACAGGAGTTGCTAGGTTTTGTATTTGGGAAAGTGCCTCTTCTTTGGTAAGAGAGCACTGGGGATAAGTGAGGAAATAGTTCTTGGATTGAACTCTAAATTTCTTAGGCGGTGGCATTTTAGTAATAAGAAGGGGTACTCCAGTTGAGCTCCCTCAAAACTTGCTCATGCAATTGGAGTATTGGAGTACTATATATACTATAACTCTCAATCTCGGTTTTGGAACACGTGGCGGCCATCCGTATAATATT
Gene Information
|
NCBI Accession
|
YP_008400122.1
|
|
Location
|
181-936 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGCCTAAGCGCGATCTCCCATGGCGCGCAATGCCTGGAACATCAAAGGTTAGTCGCAATGCTAACTACTCTCCACGTGCAGGTGGTGGCTCGAAATTGAGTAGGGCCTCTGAGTGGGTTAACAGGCCCATGTATATGAAGCCCAGGATTTATCGGACGCTGAGGACTCCAGATGTGCCCAGAGGCTGTGAAGGTCCTTGTAAGGTCCAGTCATATGAACAGCGTCACGATATTTCACATGTCGGGAAGGTCATGTGTATCTCTGATGTCACACGTGGCAATGGCATCACCCACCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTTGGTAAGATCTGGATGGATGAGAATATCAAGCTGAAGAACCACACCAACAGCGTTATGTTCTGGCTGGTCAGGGACCGTAGACCGTATGGAACGCCCATGGATTTCGGTCAGGTATTCAACATGTTCGACAACGAGCCCAGCACTGCCACGGTCAAGAACGATCTCCGTGATCGTTATCAAGTTATGCACAAGTTCTATGGTAAGGTGACAGGTGGACAGTATGCAAGTAACGAGCAGGCAATCGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAATCATCAAGAGGCTGGCAAGTATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTTTATGCAACGCTTAAGATTCGAATCTATTTTTATGATTCGATTATGAATTAA |
|
Protein Sequence
|
MPKRDLPWRAMPGTSKVSRNANYSPRAGGGSKLSRASEWVNRPMYMKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
|
NCBI Accession
|
YP_008400123.1
|
|
Location
|
933-1331 |
|
Gene Name
|
AC3 |
|
Protein Name
|
replication enhancement protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTTTATTTCAAACTATACAAGGTAGAGGACCCACTCTTCACGAACACCAGGATATACAGCGTGCAAATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGATATCCCTGACAGCTTCTGGGTCGACTTATTTGAATAGATTTAAGCGTTTAGTTCATATGTACTTAGATCGATTGGGTGTTATTTCCATTAACAACGTAATTAGGGCTGTTCGTTTCGCAACAGACAGATCGTATGTAAATTATGTCGTGGAAGATCATTCAATAAAATTCAAAATTTATTAA |
|
Protein Sequence
|
MDSRTGELITAPQAENGVYIWEIENPLYFKLYKVEDPLFTNTRIYSVQIRFNHNLRKALDLHKAYLNFQVWTISLTASGSTYLNRFKRLVHMYLDRLGVISINNVIRAVRFATDRSYVNYVVEDHSIKFKIY |
|
NCBI Accession
|
YP_008400124.1
|
|
Location
|
1078-1467 |
|
Gene Name
|
AC2 |
|
Protein Name
|
transactivator protein |
|
Coding Region
|
ATGCGGTCTTCATCACCCTCGACTCCCCCCTCTATCAAGAAGAAACACAGGGAGGCCAAGAAGAGGTCAGTCAGACGACGCCGCATTGATCTGGAGTGCGGTTGCTCCATATACTTCCACATAGGCTGCACAGGACATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTTTATTTCAAACTATACAAGGTAGAGGACCCACTCTTCACGAACACCAGGATATACAGCGTGCAAATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGATATCCCTGACAGCTTCTGGGTCGACTTATTTGAATAG |
|
Protein Sequence
|
MRSSSPSTPPSIKKKHREAKKRSVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGGEWRVYLGDRKSPLFQTIQGRGPTLHEHQDIQRANTVQPQPQESIGSPQSLPELPSLDDIPDSFWVDLFE |
|
NCBI Accession
|
YP_008400125.1
|
|
Location
|
1379-2464 |
|
Gene Name
|
AC1 |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGCCACCGCCTAAGAAATTTAGAGTTCAATCCAAGAACTATTTCCTCACTTATCCCCAGTGCTCTCTTACCAAAGAAGAGGCACTTTCCCAAATACAAAACCTAGCAACTCCTGTTAACAAGAAATTCATCAAGATCTGCAGAGAATTTCACGAAGATGGGCAACCTCATCTACATGTGCTCATCCAGTTCGAAGGAAAATACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACAGTTGAATGGGGACAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACACATATGCTAAAGCGTTAAATGCAGGATCAGCAGAGGCAGCTCTGCAAATAATAAAGGAAGAACAACCGCAACATTTCTTCCTTCAACATCACAACCTGGTTGCTAACGCAACCAGAATATTCCAAAAGCCTCCGGAGCCATGGACTCCTCCGTTTCCACTCTCCTCTTTCACTAACGTTCCCGACGAGATGCAAGAATGGGCAGATGATTATTTTGGAAAGAGTCCCGCTGCGCGGCCAGAAAGACCATTAAGTCTCATAGTCGAAGGTGATTCAAGAACAGGAAAGACGATGTGGGCTCGATCATTAGGCCCACATAATTATCTTAGTGGACACCTAGACTTCAATTCCAGAGTGTACTCGGACGAAGTGGAGTATAACGTCATTGATGATGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAACTTTTTTGGGCCCAAAAGAAATGGCAGTCAAATTGCAAGTACGGCAAGCCAGTTGTCATTAAAGGAGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCCAGTTATAAAGATTTCCTCAACAAAGAGGAAAACACAGGCATCAGGAACTGGACCCTGAAGAATGCGGTCTTCATCACCCTCGACTCCCCCCTCTATCAAGAAGAAACACAGGGAGGCCAAGAAGAGGTCAGTCAGACGACGCCGCATTGA |
|
Protein Sequence
|
MPPPKKFRVQSKNYFLTYPQCSLTKEEALSQIQNLATPVNKKFIKICREFHEDGQPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTVEWGQFQIDGRSARGGQQSANDTYAKALNAGSAEAALQIIKEEQPQHFFLQHHNLVANATRIFQKPPEPWTPPFPLSSFTNVPDEMQEWADDYFGKSPAARPERPLSLIVEGDSRTGKTMWARSLGPHNYLSGHLDFNSRVYSDEVEYNVIDDVAPHYLKLKHWKELFWAQKKWQSNCKYGKPVVIKGGIPSIVLCNPGEGASYKDFLNKEENTGIRNWTLKNAVFITLDSPLYQEETQGGQEEVSQTTPH |
|
NCBI Accession
|
YP_008400126.1
|
|
Location
|
2050-2307 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGCAACCTCATCTACATGTGCTCATCCAGTTCGAAGGAAAATACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACAGTTGAATGGGGACAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACACATATGCTAAAGCGTTAA |
|
Protein Sequence
|
MGNLIYMCSSSSKENTSARITDSSIWSPQPGQHISIRTYRELNQAPTSSPTSTRTEIQLNGDSSRSTADLLEEVSNLLTTHMLKR |