Bean white chlorosis mosaic virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000910695.1
Isolate Venezuela
Release date 2015/2/22
Submitter Fiallo-Olive,E., Marquez-Martin,B., Hassan,I., Chirinos,D.T., Geraud-Pouey,F., Navas-Castillo,J., Moriones,E., Chirinos,D.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_022005
ACCGGATGGCCGCGCGATTTTTTCTGCCCCTCCGCTTTAATTCGAATTAAAGCGTGCTGCTTTCGTTTCGTCCAATGATATTGCGTCTGACGAGCTTAGATATTTGCAACAACTTGGGCGCTAAGTTGTTGGGTCAAGATTATAAATTAAAGCAGCACGGCCCACTGCCTTTAACTCAAAATGCCTAAGCGCGATCTCCCATGGCGCGCAATGCCTGGAACATCAAAGGTTAGTCGCAATGCTAACTACTCTCCACGTGCAGGTGGTGGCTCGAAATTGAGTAGGGCCTCTGAGTGGGTTAACAGGCCCATGTATATGAAGCCCAGGATTTATCGGACGCTGAGGACTCCAGATGTGCCCAGAGGCTGTGAAGGTCCTTGTAAGGTCCAGTCATATGAACAGCGTCACGATATTTCACATGTCGGGAAGGTCATGTGTATCTCTGATGTCACACGTGGCAATGGCATCACCCACCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTTGGTAAGATCTGGATGGATGAGAATATCAAGCTGAAGAACCACACCAACAGCGTTATGTTCTGGCTGGTCAGGGACCGTAGACCGTATGGAACGCCCATGGATTTCGGTCAGGTATTCAACATGTTCGACAACGAGCCCAGCACTGCCACGGTCAAGAACGATCTCCGTGATCGTTATCAAGTTATGCACAAGTTCTATGGTAAGGTGACAGGTGGACAGTATGCAAGTAACGAGCAGGCAATCGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAATCATCAAGAGGCTGGCAAGTATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTTTATGCAACGCTTAAGATTCGAATCTATTTTTATGATTCGATTATGAATTAATAAATTTTGAATTTTATTGAATGATCTTCCACGACATAATTTACATACGATCTGTCTGTTGCGAAACGAACAGCCCTAATTACGTTGTTAATGGAAATAACACCCAATCGATCTAAGTACATATGAACTAAACGCTTAAATCTATTCAAATAAGTCGACCCAGAAGCTGTCAGGGATATCGTCCAGACTTGGAAGTTCAGGTAGGCTTTGTGGAGATCCAATGCTTTCCTGAGGTTGTGGTTGAACCGTATTTGCACGCTGTATATCCTGGTGTTCGTGAAGAGTGGGTCCTCTACCTTGTATAGTTTGAAATAAAGGGGATTTTCTATCTCCCAGATATACACGCCATTCTCCGCCTGAGGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGTCCTGTGCAGCCTATGTGGAAGTATATGGAGCAACCGCACTCCAGATCAATGCGGCGTCGTCTGACTGACCTCTTCTTGGCCTCCCTGTGTTTCTTCTTGATAGAGGGGGGAGTCGAGGGTGATGAAGACCGCATTCTTCAGGGTCCAGTTCCTGATGCCTGTGTTTTCCTCTTTGTTGAGGAAATCTTTATAACTGGCACCCTCACCAGGATTGCAAAGCACGATTGATGGGATCCCTCCTTTAATGACAACTGGCTTGCCGTACTTGCAATTTGACTGCCATTTCTTTTGGGCCCAAAAAAGTTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACATCATCAATGACGTTATACTCCACTTCGTCCGAGTACACTCTGGAATTGAAGTCTAGGTGTCCACTAAGATAATTATGTGGGCCTAATGATCGAGCCCACATCGTCTTTCCTGTTCTTGAATCACCTTCGACTATGAGACTTAATGGTCTTTCTGGCCGCGCAGCGGGACTCTTTCCAAAATAATCATCTGCCCATTCTTGCATCTCGTCGGGAACGTTAGTGAAAGAGGAGAGTGGAAACGGAGGAGTCCATGGCTCCGGAGGCTTTTGGAATATTCTGGTTGCGTTAGCAACCAGGTTGTGATGTTGAAGGAAGAAATGTTGCGGTTGTTCTTCCTTTATTATTTGCAGAGCTGCCTCTGCTGATCCTGCATTTAACGCTTTAGCATATGTGTCGTTAGCAGATTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAACTGTCCCCATTCAACTGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTTGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAGATCGAAGAATCTGTTATTCGTGCACTGGTATTTTCCTTCGAACTGGATGAGCACATGTAGATGAGGTTGCCCATCTTCGTGAAATTCTCTGCAGATCTTGATGAATTTCTTGTTAACAGGAGTTGCTAGGTTTTGTATTTGGGAAAGTGCCTCTTCTTTGGTAAGAGAGCACTGGGGATAAGTGAGGAAATAGTTCTTGGATTGAACTCTAAATTTCTTAGGCGGTGGCATTTTAGTAATAAGAAGGGGTACTCCAGTTGAGCTCCCTCAAAACTTGCTCATGCAATTGGAGTATTGGAGTACTATATATACTATAACTCTCAATCTCGGTTTTGGAACACGTGGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_008400122.1
Location 181-936
Gene Name AV1
Protein Name coat protein
Coding Region ATGCCTAAGCGCGATCTCCCATGGCGCGCAATGCCTGGAACATCAAAGGTTAGTCGCAATGCTAACTACTCTCCACGTGCAGGTGGTGGCTCGAAATTGAGTAGGGCCTCTGAGTGGGTTAACAGGCCCATGTATATGAAGCCCAGGATTTATCGGACGCTGAGGACTCCAGATGTGCCCAGAGGCTGTGAAGGTCCTTGTAAGGTCCAGTCATATGAACAGCGTCACGATATTTCACATGTCGGGAAGGTCATGTGTATCTCTGATGTCACACGTGGCAATGGCATCACCCACCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTTGGTAAGATCTGGATGGATGAGAATATCAAGCTGAAGAACCACACCAACAGCGTTATGTTCTGGCTGGTCAGGGACCGTAGACCGTATGGAACGCCCATGGATTTCGGTCAGGTATTCAACATGTTCGACAACGAGCCCAGCACTGCCACGGTCAAGAACGATCTCCGTGATCGTTATCAAGTTATGCACAAGTTCTATGGTAAGGTGACAGGTGGACAGTATGCAAGTAACGAGCAGGCAATCGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAATCATCAAGAGGCTGGCAAGTATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTTTATGCAACGCTTAAGATTCGAATCTATTTTTATGATTCGATTATGAATTAA
Protein Sequence MPKRDLPWRAMPGTSKVSRNANYSPRAGGGSKLSRASEWVNRPMYMKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN

NCBI Accession YP_008400123.1
Location 933-1331
Gene Name AC3
Protein Name replication enhancement protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTTTATTTCAAACTATACAAGGTAGAGGACCCACTCTTCACGAACACCAGGATATACAGCGTGCAAATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGATATCCCTGACAGCTTCTGGGTCGACTTATTTGAATAGATTTAAGCGTTTAGTTCATATGTACTTAGATCGATTGGGTGTTATTTCCATTAACAACGTAATTAGGGCTGTTCGTTTCGCAACAGACAGATCGTATGTAAATTATGTCGTGGAAGATCATTCAATAAAATTCAAAATTTATTAA
Protein Sequence MDSRTGELITAPQAENGVYIWEIENPLYFKLYKVEDPLFTNTRIYSVQIRFNHNLRKALDLHKAYLNFQVWTISLTASGSTYLNRFKRLVHMYLDRLGVISINNVIRAVRFATDRSYVNYVVEDHSIKFKIY

NCBI Accession YP_008400124.1
Location 1078-1467
Gene Name AC2
Protein Name transactivator protein
Coding Region ATGCGGTCTTCATCACCCTCGACTCCCCCCTCTATCAAGAAGAAACACAGGGAGGCCAAGAAGAGGTCAGTCAGACGACGCCGCATTGATCTGGAGTGCGGTTGCTCCATATACTTCCACATAGGCTGCACAGGACATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTTTATTTCAAACTATACAAGGTAGAGGACCCACTCTTCACGAACACCAGGATATACAGCGTGCAAATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGATATCCCTGACAGCTTCTGGGTCGACTTATTTGAATAG
Protein Sequence MRSSSPSTPPSIKKKHREAKKRSVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGGEWRVYLGDRKSPLFQTIQGRGPTLHEHQDIQRANTVQPQPQESIGSPQSLPELPSLDDIPDSFWVDLFE

NCBI Accession YP_008400125.1
Location 1379-2464
Gene Name AC1
Protein Name replication associated protein
Coding Region ATGCCACCGCCTAAGAAATTTAGAGTTCAATCCAAGAACTATTTCCTCACTTATCCCCAGTGCTCTCTTACCAAAGAAGAGGCACTTTCCCAAATACAAAACCTAGCAACTCCTGTTAACAAGAAATTCATCAAGATCTGCAGAGAATTTCACGAAGATGGGCAACCTCATCTACATGTGCTCATCCAGTTCGAAGGAAAATACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACAGTTGAATGGGGACAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACACATATGCTAAAGCGTTAAATGCAGGATCAGCAGAGGCAGCTCTGCAAATAATAAAGGAAGAACAACCGCAACATTTCTTCCTTCAACATCACAACCTGGTTGCTAACGCAACCAGAATATTCCAAAAGCCTCCGGAGCCATGGACTCCTCCGTTTCCACTCTCCTCTTTCACTAACGTTCCCGACGAGATGCAAGAATGGGCAGATGATTATTTTGGAAAGAGTCCCGCTGCGCGGCCAGAAAGACCATTAAGTCTCATAGTCGAAGGTGATTCAAGAACAGGAAAGACGATGTGGGCTCGATCATTAGGCCCACATAATTATCTTAGTGGACACCTAGACTTCAATTCCAGAGTGTACTCGGACGAAGTGGAGTATAACGTCATTGATGATGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAACTTTTTTGGGCCCAAAAGAAATGGCAGTCAAATTGCAAGTACGGCAAGCCAGTTGTCATTAAAGGAGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCCAGTTATAAAGATTTCCTCAACAAAGAGGAAAACACAGGCATCAGGAACTGGACCCTGAAGAATGCGGTCTTCATCACCCTCGACTCCCCCCTCTATCAAGAAGAAACACAGGGAGGCCAAGAAGAGGTCAGTCAGACGACGCCGCATTGA
Protein Sequence MPPPKKFRVQSKNYFLTYPQCSLTKEEALSQIQNLATPVNKKFIKICREFHEDGQPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTVEWGQFQIDGRSARGGQQSANDTYAKALNAGSAEAALQIIKEEQPQHFFLQHHNLVANATRIFQKPPEPWTPPFPLSSFTNVPDEMQEWADDYFGKSPAARPERPLSLIVEGDSRTGKTMWARSLGPHNYLSGHLDFNSRVYSDEVEYNVIDDVAPHYLKLKHWKELFWAQKKWQSNCKYGKPVVIKGGIPSIVLCNPGEGASYKDFLNKEENTGIRNWTLKNAVFITLDSPLYQEETQGGQEEVSQTTPH

NCBI Accession YP_008400126.1
Location 2050-2307
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGCAACCTCATCTACATGTGCTCATCCAGTTCGAAGGAAAATACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACAGTTGAATGGGGACAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACACATATGCTAAAGCGTTAA
Protein Sequence MGNLIYMCSSSSKENTSARITDSSIWSPQPGQHISIRTYRELNQAPTSSPTSTRTEIQLNGDSSRSTADLLEEVSNLLTTHMLKR

References More References in PubMed

1

Detection of new viruses in alfalfa, weeds and cultivated plants growing adjacent to alfalfa fields in Saudi Arabia.

Al-Shahwan IM, et al.  Saudi J Biol Sci. 2017 Sep;24(6):1336-1343. doi: 10.1016/j.sjbs.2016.02.022. Epub 2016 Mar 2.

PMID: 28855829
2

First Report of Alfalfa mosaic virus in Kura Clover (Trifolium amgibuum) in Wisconsin.

Piñeyro MJ, et al.  Plant Dis. 2002 Jun;86(6):695. doi: 10.1094/PDIS.2002.86.6.695A.

PMID: 30823257
3

Complete genome sequences of two novel begomoviruses infecting common bean in Venezuela.

Fiallo-Olivé E, et al.  Arch Virol. 2013 Mar;158(3):723-7. doi: 10.1007/s00705-012-1545-y. Epub 2012 Nov 21.

PMID: 23178970