Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000843765.1 |
Isolate | China:Hainan province |
Release date | 2015/2/12 |
Submitter | Zhou,X., Fan,S. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_671448.1 |
---|---|
Location | 130-480 |
Gene Name | AV2 |
Protein Name | pre-coat protein |
Coding Region | ATGTGGGATCCACTTGTAAACGAGTTCCCTGAAACCGTACATGGTCTACGGTGCATGCTCGCTGTAAAATACTTGCAGTTAGTTGAGCAGACATACTCTCCGGATACGTTGGGGTACGATCTCGTGCGAGATTTAATTTTAGTTATCAGAGCTCGAGACTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAACTTCGACAGCCCGTATGTCAACCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGACGTGGGTGAATCGGCCCATGTATCGCAAGCCCAGACTATTCAGAACGTACAGAAGTCCTGA |
Protein Sequence | MWDPLVNEFPETVHGLRCMLAVKYLQLVEQTYSPDTLGYDLVRDLILVIRARDYVEASRRYSHFHSRIQGASPAELRQPVCQPCCCPHCPRHKQKEDVGESAHVSQAQTIQNVQKS |
NCBI Accession | NP_671449.1 |
---|---|
Location | 290-1063 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAACTTCGACAGCCCGTATGTCAACCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGACGTGGGTGAATCGGCCCATGTATCGCAAGCCCAGACTATTCAGAACGTACAGAAGTCCTGATGTGCCCAAAGGTTGTGAAGGCCCATGCAAAGTCCAATCGTATGAACAGAGGCACGACATATCCCATGTGGGTAAAGTATTATGTGTTAGTGATGTCACTCGTGGTAGTGGGCTTACCCATCGTGTTGGTAAGAGATTCTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAGACGAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGACTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCCAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTGAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAGGAAATTTATGAAGATAAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGAGAATCATACTGAGAATGCGTTATTATTGTATATGGCATGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAAAATCTATTTCTATGATTCTGTTCAGAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYVNRAAAPTVLVTNKRRTWVNRPMYRKPRLFRTYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIKIYFYDSVQN |
NCBI Accession | NP_671450.1 |
---|---|
Location | 1060-1464 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTTTCGCACCGGGGAACCCATCACTGCAGCTCAAGCAGAGAATGGCGTGTATATCTGGACGGTCAGAAATCCCCTATATTTCAAAATCACCCAGCACGACCAGAGGCCGTTCTCAACGAACCACGACGTAATAACACTCCAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACCAATGTTTTCTAATCTGCAGAATTTGGACTCATTTACGTCCTCAGACTTGGTGTTTTTTAAAAGTATTTAAGTATCAATGTATTAAATATTTAGACAATTTGGGAGTGATTAGTATAAACAATGTAATTAGGGCATTTTCTCATGTATTATACAATGTATTAGAGGGGACAATTGATGAAGAATTATCAAGTATAATAAAATTCAATTTTTATTAA |
Protein Sequence | MDFRTGEPITAAQAENGVYIWTVRNPLYFKITQHDQRPFSTNHDVITLQVQFNYNLRKALGIHQCFLICRIWTHLRPQTWCFLKVFKYQCIKYLDNLGVISINNVIRAFSHVLYNVLEGTIDEELSSIIKFNFY |
NCBI Accession | NP_671451.1 |
---|---|
Location | 1205-1609 |
Gene Name | AC2 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCGATCTTCGTCACCATCCAACGGCCACTCTACTCAGGTTCCAATCAAGGTGCAACACAAAATAGCCAAGCGAACAACGAGGAGACGACGAGTTGACCTCCCTTGTGGATGCTCTTATTTCATAGCTATAGGCTGCCACAATCATGGATTTTCGCACCGGGGAACCCATCACTGCAGCTCAAGCAGAGAATGGCGTGTATATCTGGACGGTCAGAAATCCCCTATATTTCAAAATCACCCAGCACGACCAGAGGCCGTTCTCAACGAACCACGACGTAATAACACTCCAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACCAATGTTTTCTAATCTGCAGAATTTGGACTCATTTACGTCCTCAGACTTGGTGTTTTTTAAAAGTATTTAA |
Protein Sequence | MRSSSPSNGHSTQVPIKVQHKIAKRTTRRRRVDLPCGCSYFIAIGCHNHGFSHRGTHHCSSSREWRVYLDGQKSPIFQNHPARPEAVLNEPRRNNTPSPIQLQPEESVGDTPMFSNLQNLDSFTSSDLVFFKSI |
NCBI Accession | NP_671452.1 |
---|---|
Location | 1512-2597 |
Gene Name | AC1 |
Protein Name | rep protein |
Coding Region | ATGCCTCCCCCGCGTCGTTTTAAAATACAAGCTAAAAATTATTTCCTCACTTATCCACAGTGCTCTCTAACTAAAGAGGAAGCACTCTCCCAACTTCAAAACCTAGAAACCCCAACCAACAAAAAATACATCAAAATCTGCAGAGAGCTTCACGAAGATGGGAGCCCTCATATCCACGTGCTTATCCAGTTCGAGGGAAAATACGTCTGCACGAATAACAGATTCTTCGACTTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGATAAGGACGGAGACACCCTCGAGTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGACGCTTACGCCGCAGCACTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTAATTAAGGAGTTAGCTCCAAAAGATTATGTTTTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTGCACCTCCTTTAGAGGTATTTGTTTGTCCTTTTTCTTCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTCATGAATGGTCTGCAAATAATGTTGTCAATGCCGCTGCGCGGCCTTTGAGACCGATTAGTATTGTGATAGAAGGTGATAGTCGTACTGGTAAAACAATGTGGGCTAGGTCGTTAGGACCACACAATTATCTGTGTGGACATCTTGATCTCAGCCCAAAGGTATACAGCAATGATGCTTGGTATAACGTCATTGATGACGTCGACCCCCACTATCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAATCCAATACAAAGTATGGGAAGCCAGTTCAAATTAAAGGTGGTATCCCAACAATCTTCCTATGCAATCCAGGACCCAATTCCAGCTATAAAGAGTTCTTAGACGAAGAAAAGAATTCCGCATTAAAAAATTGGGCTATACATAATGCGATCTTCGTCACCATCCAACGGCCACTCTACTCAGGTTCCAATCAAGGTGCAACACAAAATAGCCAAGCGAACAACGAGGAGACGACGAGTTGA |
Protein Sequence | MPPPRRFKIQAKNYFLTYPQCSLTKEEALSQLQNLETPTNKKYIKICRELHEDGSPHIHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKSEALNVIKELAPKDYVLQFHNLNANLDRIFAPPLEVFVCPFSSSSFDQVPEELHEWSANNVVNAAARPLRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWAIHNAIFVTIQRPLYSGSNQGATQNSQANNEETTS |
NCBI Accession | NP_671453.1 |
---|---|
Location | 2150-2440 |
Gene Name | AC4 |
Protein Name | transcriptional regulator protein |
Coding Region | ATGGGAGCCCTCATATCCACGTGCTTATCCAGTTCGAGGGAAAATACGTCTGCACGAATAACAGATTCTTCGACTTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGATAAGGACGGAGACACCCTCGAGTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGACGCTTACGCCGCAGCACTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTAA |
Protein Sequence | MGALISTCLSSSRENTSARITDSSTWSPQPGQHISIRTFRELNPAPTSSPISIRTETPSSGESFRSTDDLQEGDNNQPMTLTPQHLTQAVSQRLLM |
1 |
Tseng YW, et al. Plant Dis. 2023 Feb 1. doi: 10.1094/PDIS-10-22-2304-PDN. Online ahead of print. PMID: 36723960 |
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2 |
Stachytarpheta leaf curl virus is a novel monopartite begomovirus species. Xiong Q, et al. Arch Virol. 2005 Nov;150(11):2257-70. doi: 10.1007/s00705-005-0568-z. Epub 2005 Jun 28. PMID: 15986176 |
3 |
Tseng YW, et al. Plant Dis. 2022 Dec 8. doi: 10.1094/PDIS-05-22-1114-PDN. Online ahead of print. PMID: 36480732 |
4 |
Xiong Q, et al. Wei Sheng Wu Xue Bao. 2007 Feb;47(1):39-43. PMID: 17436621 |
5 |
Towards area wide management of insect vectored viruses of tomatoes in the Bowen district. Campbell PR, et al. Virus Res. 2017 Sep 15;241:228-235. doi: 10.1016/j.virusres.2017.06.011. Epub 2017 Jun 15. PMID: 28625668 |