Sri Lankan cassava mosaic virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000858725.1
Isolate Sri Lanka:Columbo
Release date 2015/2/13
Submitter Saunders,K., Salim,N., Mali,V.R., Malathi,V.G., Briddon,R., Markham,P.G., Stanley,J.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_003861
ACCGGATGGCCGCGCGTCCCCTCGTGGTGTGGGCCCCCCACGTGTAGATGTCCCCCAATTAGAACGCGCCTTGGAAGGCTAGTTATTTGTGGTCCCCCTATATCAACTTGCTCACCAAGTTGTTCATCCACACAATGTGGGACCCTCTATTGAACGAGTTCCCAGAATCCGTCCACGGTTTCCGGTGTATGCTCGCCGTCAAATACCTTCAGCTGGTAGAAGGTACATATTCACCAGACACTCTGGGACACGAGTTAATCAGGGATCTCATATCCGTCATCAGGGCGAAGAATTATGTCGAAGCGACCAGCAGATATAATTATTTCTACTCCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCACTGTCCGCGTCACAAAAAGACAGCTATGGGCAAACAGGCCCATGAATCGGAAGCCCAGGTGGTATCGGATGTATAGGAGCCCAGATGTTCCTAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTCGAGTCGAGACACGATGTGGTCCATATAGGTAAGGTCATGTGCATCTCTGATGTCACTCGTGGAATTGGGCTTACTCATCGGGTGGGTAAGAGATTTTGTGTTAAGTCCGTTTACATCCTGGGCAAGATATGGATGGATGAAAACATTAAGACCAAAAATCACACGAATAGCGTAATGTTCTTCCTTGTAAGGGATCGTAGGCCCGTTGATAAGCCTCAGGATTTTGGTGAAGTATTTAATATGTTTGATAATGAGCCCAGTACAGCTACTGTGAAGAACATGCATCGTGATCGCTATCAAGTTCTCAGGAAGTGGAGTGCCACTGTCACTGGTGGTCAGTATGCGAGCAAGGAGCAGGCTTTAGTCAGGCGTTTTTTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGGAAATATGAGAACCATACTGAGAATGCATTAATGTTGTACATGGCGTGTACTCATGCCTCTAATCCTGTATACGCTACGTTGAAGATTAGAATCTACTTCTATGATTCAGTGAGCAATTAATAAATATTTAATTTTATTAAATTAGACTGCTCAACACGGTCAGTCCCATGGATTACATTGTACAATACATGCTCTACGGCGTTTACAACAGTATTAATACTTATAACTCCTAAGCGATCTAAGTATTTCAATACTTGGGTCTTAAATACCCTCAAGAAACGCCAGGTCTGAGGCTGTAAGGTCGTCCAGACCTTGAAATCCATCCAGCATTGGTGTAGTCCCAACGCTCTCCTCAGGTTGTGGTTGAACCGTATCTGGACGGTTATTATGTCCCACGGCATGCTGAACGGCCGGCTGTCGTGCTGGATGATCTTGAAATAGAGGGGATTTGGAACCTCCCAGATATAGACGCCATTCATCGCCTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTTATGTGCACGTAGTACGAGCACCCGCAGTTGAGGTCTACCCTCCGTCGCCGGATGGCCTTACGCTTAGCTGCTCTGTGTTGGACCTTGATTGGAACCTGAGTAGAGCGGCTCGCTGAGGGAGATGAAGGTCGCATTCTTCAGAGCCCAAGCCTTCAATGCGATATTCTTCGCCTCGTCAAGGAATTCTTTATAGCTGGAATTGGGCCCAGGATTGCACAGGAAGATAGTGGGGATTCCCCCTTTAATTTGAACTGGTTTCCCGTACTTGGTGTTTGACTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAATGCGGATCTACGTCATCAATTACGTTGTACCATGCATCATTGCTGTAAACCCTAGGACTCAAGTCCAGATGTCCACACAGATAGTTGTGTGGACCCAATGACCTAGCCCACATCGTTTTGCCTGTACGACTATCGCCCTCGATGACTATACTATTAGGTCTCAAAGGCCTCGCAGAGGCACCCATGACATTCTCTGACACCCACTCCTCAAGTTCATCTGGAACTTGGTCAAATGAAGAGGCTGAGAAGGGAGACACATACACCTCGGGAGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAATCCTTGGGTGCTAACTCCTTAATGACTCTAAGAGCCTCTGGCTTACTGCCTGTGTTAAGTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGATCTGAAACTCACCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTGAGCTGGACTTAGCGCTCTGTATGTTGGGGTGGAAACTGGTGCTACTGCTTGGGTGTACACAATCGAATTGCCGATTGTTTGTGATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCATGGAGGTGAGGTTCCCCATTATGATGGAGTTCTCTGCAAATTTTAATAAATTTGATGTTTGTCGGAAGACTCAAGCTTCGGAAGAAGTCGAGTAAGTGTTCTTTGGTGAGAGAACACTTAGGGTATGTGAGGAATATATTTTTGGACTGAATTCGGAATCGTGGGTTTCTCATCTTTGACTCGGTCAATTGGAGACACCCCTGAGCAAGTCTCTAGTGAATTGGAGACATTATATATTGTCTCCAAATGGCATTCTCGTAATTCCCAAAAGTTACATTCAAATTTCAAATTCGAATTTGAAATCCAAAAGCGGCCATCCGTATAATATT
NC_003862
ACCGGATGGCCGCGTCCCCCTCTTTATGGTGGCCCCCCCCACGTTGGGATGTCCCCCTCTCACAACGCGCACTAGGAGGTTCAACATGTTAGTGGCCCCACGATGTTGTTTATAACGTCTATAACGTTTGAGACTCGAAGCATGTGATGCCACGTATGCGTTATTTGTACTTCGTCTCGAAGTTATGAGTGAGGGCCCTATGTGTGGATATCTAACCGCATATTGTGCGAATGGATTAAACGTGGCAAGATCATGCCGTTTATTGGGAACTATATTATTATGCTGTGGTCTATATATATGGGTATGTCGTGTATTGAGATCTGCACATGGTTGTTTCAGGATGAGAAGAGGTGCTTATACCCCCCGTTCTACGCCATTCCCTCGTGACCGGAGATCGTATAATGCCGGTAAGGGTAGATCCTTTCGTTCGTACCGTCGTCGTGGACCTGTTCGTCCATTAGCTCGTCGGAACCTGTTTGGTGATGACCATGCACGTGCATTCACGTATAAGACCTTATCGGAGGATCAATTTGGACCGGACTTTACCATACATAATAATAATTATAAGTCATCTTATATATCTATGCCTGCCAAAACACGTGCCCTTAGCGATAACAGGGTAGGTGATTATATCAAACTTGTAAATATATCATTTACAGGTACAGTGTGTATAAAAAACAGCCAGATGGAGTCTGACGGAAGCCCAATGTTGGGCCTGCATGGGCTGTTTACTTGTGTATTGGTCCGGGATAAGACCCCTCGTATATATTCTGCCACTGAGCCTTTGATACCTTTCCCACAGTTGTTTGGGTCCATAAACGCGAGCTATGCGGATTTGTCTATACAAGACCCATATAAGGATCGATTCACAGTTATCCGTCAGGTGTCTTACCCAGTTAATACGGAGAAGGGTGATCATATGTGTCGTTTCAAAGGCACTCGTCGTTTTGTTGGTAGATACCCTATCTGGACTAGTTTTAAAGATGATGGTGGCAGTGGAGATTCATCGGGATTATATAGTAATACGTATAAAAATGCCATACTTGTATATTATGTATGGCTCAGCGACGTATCGTCACAATTGGAAATGTATTGTAAATATGTAACTCGATATATTGGTTAATAAAAATGTTATACATTTTTGGATACATGACTTTGCATACTCGTATTTAAACACATATCTACTGTCTTGCTGATGATGTCGTTTAAGTCCTCTCGTGTGAAGTGGTTCGATCCTACTTGTGATACTGACTTTCCTGGGTCCAATGCGTCTGGGTTGAGCCGGTTTAGTTGGCTGTAAGGCCTTTCAAATGATGGCCCAGCCTCGCTCGTAACGGCCCATGGCCCGTTAAGCCCAATCTCGCTTCTAACGGCCCATGATTCATTTGGGCCTATGGAACATGGAGCATATCTCTTGGAGCGGGATCCTATTAGACTTGGGCCTTGGACCAGTTTCCTCTGCTGGGCTTTTGGACCCACTGACCAGAAATCAATGTCCCTCTCAGTGAAGGCCTTGCTCAGTATCTCGATTTTGGGAGATCTGAACTGTATGTCATTAGACTGCTTTGCAGTTGACAGCTTGAGTTTGCCCTGTATACGGCAGAAGTGGACCCCGTTGATGACGTTTGTGTCTACGACTCTGTACATAACCCTCCATGGGTTTATGTCCTTCATGGAGAAGAACGATGAAGAATAGTAGTGAAGGTTGCAATTGCATTGGACGGGAATAGTAAATTCAGCCTGTTTTGAGTCTCCGTCATGCAGTCTTTGGTCGTGAATTTCAATGATGACATGCCCTGTGGCGTTAATGGGTACCTGGTTTCTATACTCTAGGACGATGTGGTCTATTTTGCAGCAGTGACCCTTGAGGAGCGATATTTTGGTATCCAGAAGAGATGGAAAGCTTAACTTGACGTCTGTTGAGTCATTGGTTAACTCATATTCAACTCTTTCGGAACGAAGATACGCTGCATTGCTACTATTATTCTCCATTGGCCCCGCAGGGGAAATGCTTAAAAATTAAGCCCAGTGCAGAAGAAATAATTTAATGTGCATAAAGCAAAGCCCAAAGCGCAATAAATAGCTAAAGGCATATATATTATATTATTGATGAAAGGTTACAAGAGCATCCACGTGGCAGTGGATTAAATACATGAAAAGCTATACAATATATTTAAAAAAAGTGTTGACGACGTCATCTTCAACGAATGGAACCGGAAACCCTAATCCATCTCTGAGGACTCTGGTGAAGCCCTCTAGTAGTATGTCACATGTTTCCGGTGTCATGTGGTAGTAATTTTTGAGTTTGTAACCCCAATCTTCCATTTTGAAGGCCATATGTATGGCTCTATCTATTTCTGGTAACAGATCCATATCTTGTTCTTCGAATTGGAGGTAATAGGAATTTGAACCAGTCGCGATGTAAGATTGATGTCTGCTAGTAGTTTTGAATTCGACCCAGATCGAATTCTTCATAATGCGACTGGATAGTCGCACACATTTCTTGCTGTGTTGCAAGAAGGAATAGTTAGTTTGGGAAGACATAGGAAGGAGGAGAATGACTTGGTCAATTGGAGACACCCCTGAGCAAGTCTCTAGTGAATTGGAGACATTATATATTGTCTCCAAATGGCATTCTTGTAATTCCTAAAAGTTACATTCAAATTTCAAAGTCGAATTTGAAATCCAAAAGCGGCCATCCTTATAATATT

Gene Information

NCBI Accession NP_620863.1
Location 135-473
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGACCCTCTATTGAACGAGTTCCCAGAATCCGTCCACGGTTTCCGGTGTATGCTCGCCGTCAAATACCTTCAGCTGGTAGAAGGTACATATTCACCAGACACTCTGGGACACGAGTTAATCAGGGATCTCATATCCGTCATCAGGGCGAAGAATTATGTCGAAGCGACCAGCAGATATAATTATTTCTACTCCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCACTGTCCGCGTCACAAAAAGACAGCTATGGGCAAACAGGCCCATGAATCGGAAGCCCAGGTGGTATCGGATGTATAG
Protein Sequence MWDPLLNEFPESVHGFRCMLAVKYLQLVEGTYSPDTLGHELIRDLISVIRAKNYVEATSRYNYFYSRLEGSSPSELRQPIQQPCCCPHCPRHKKTAMGKQAHESEAQVVSDV

NCBI Accession NP_620864.1
Location 295-1065
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCAGCAGATATAATTATTTCTACTCCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCACTGTCCGCGTCACAAAAAGACAGCTATGGGCAAACAGGCCCATGAATCGGAAGCCCAGGTGGTATCGGATGTATAGGAGCCCAGATGTTCCTAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTCGAGTCGAGACACGATGTGGTCCATATAGGTAAGGTCATGTGCATCTCTGATGTCACTCGTGGAATTGGGCTTACTCATCGGGTGGGTAAGAGATTTTGTGTTAAGTCCGTTTACATCCTGGGCAAGATATGGATGGATGAAAACATTAAGACCAAAAATCACACGAATAGCGTAATGTTCTTCCTTGTAAGGGATCGTAGGCCCGTTGATAAGCCTCAGGATTTTGGTGAAGTATTTAATATGTTTGATAATGAGCCCAGTACAGCTACTGTGAAGAACATGCATCGTGATCGCTATCAAGTTCTCAGGAAGTGGAGTGCCACTGTCACTGGTGGTCAGTATGCGAGCAAGGAGCAGGCTTTAGTCAGGCGTTTTTTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGGAAATATGAGAACCATACTGAGAATGCATTAATGTTGTACATGGCGTGTACTCATGCCTCTAATCCTGTATACGCTACGTTGAAGATTAGAATCTACTTCTATGATTCAGTGAGCAATTAA
Protein Sequence MSKRPADIIISTPGSKVRRRLNFDSPYSSRAAAPTVRVTKRQLWANRPMNRKPRWYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGIGLTHRVGKRFCVKSVYILGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWSATVTGGQYASKEQALVRRFFRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession NP_620865.1
Location 1062-1466
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCGATGAATGGCGTCTATATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCATCCAGCACGACAGCCGGCCGTTCAGCATGCCGTGGGACATAATAACCGTCCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGGGACTACACCAATGCTGGATGGATTTCAAGGTCTGGACGACCTTACAGCCTCAGACCTGGCGTTTCTTGAGGGTATTTAAGACCCAAGTATTGAAATACTTAGATCGCTTAGGAGTTATAAGTATTAATACTGTTGTAAACGCCGTAGAGCATGTATTGTACAATGTAATCCATGGGACTGACCGTGTTGAGCAGTCTAATTTAATAAAATTAAATATTTATTAA
Protein Sequence MDSRTGELITAAQAMNGVYIWEVPNPLYFKIIQHDSRPFSMPWDIITVQIRFNHNLRRALGLHQCWMDFKVWTTLQPQTWRFLRVFKTQVLKYLDRLGVISINTVVNAVEHVLYNVIHGTDRVEQSNLIKLNIY

NCBI Accession NP_620866.1
Location 1207-1614
Gene Name AC2
Protein Name transcriptional transactivator protein
Coding Region ATGCGACCTTCATCTCCCTCAGCGAGCCGCTCTACTCAGGTTCCAATCAAGGTCCAACACAGAGCAGCTAAGCGTAAGGCCATCCGGCGACGGAGGGTAGACCTCAACTGCGGGTGCTCGTACTACGTGCACATAAACTGCCACAACCATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCGATGAATGGCGTCTATATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCATCCAGCACGACAGCCGGCCGTTCAGCATGCCGTGGGACATAATAACCGTCCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGGGACTACACCAATGCTGGATGGATTTCAAGGTCTGGACGACCTTACAGCCTCAGACCTGGCGTTTCTTGAGGGTATTTAA
Protein Sequence MRPSSPSASRSTQVPIKVQHRAAKRKAIRRRRVDLNCGCSYYVHINCHNHGFTHRGTHHCSSGDEWRLYLGGSKSPLFQDHPARQPAVQHAVGHNNRPDTVQPQPEESVGTTPMLDGFQGLDDLTASDLAFLEGI

NCBI Accession NP_620867.1
Location 1544-2599
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGAGAAACCCACGATTCCGAATTCAGTCCAAAAATATATTCCTCACATACCCTAAGTGTTCTCTCACCAAAGAACACTTACTCGACTTCTTCCGAAGCTTGAGTCTTCCGACAAACATCAAATTTATTAAAATTTGCAGAGAACTCCATCATAATGGGGAACCTCACCTCCATGCTCTGCTTCAGTTCGAAGGGAAGCTCACGATCACAAACAATCGGCAATTCGATTGTGTACACCCAAGCAGTAGCACCAGTTTCCACCCCAACATACAGAGCGCTAAGTCCAGCTCAGACGTCAAGTCCTACATCGACAAGGATGGAGACACCATCGACTGGGGTGAGTTTCAGATCGATGGAAGATCTGCAAGAGGGGGACAGCAGACAGCCAACGACGCTTACGCCGCAGCACTTAACACAGGCAGTAAGCCAGAGGCTCTTAGAGTCATTAAGGAGTTAGCACCCAAGGATTATGTTTTACAATTTCATAATCTAAATGCTAATTTAGATAGGATTTTTACACCTCCTCCCGAGGTGTATGTGTCTCCCTTCTCAGCCTCTTCATTTGACCAAGTTCCAGATGAACTTGAGGAGTGGGTGTCAGAGAATGTCATGGGTGCCTCTGCGAGGCCTTTGAGACCTAATAGTATAGTCATCGAGGGCGATAGTCGTACAGGCAAAACGATGTGGGCTAGGTCATTGGGTCCACACAACTATCTGTGTGGACATCTGGACTTGAGTCCTAGGGTTTACAGCAATGATGCATGGTACAACGTAATTGATGACGTAGATCCGCATTATCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAGTCAAACACCAAGTACGGGAAACCAGTTCAAATTAAAGGGGGAATCCCCACTATCTTCCTGTGCAATCCTGGGCCCAATTCCAGCTATAAAGAATTCCTTGACGAGGCGAAGAATATCGCATTGAAGGCTTGGGCTCTGAAGAATGCGACCTTCATCTCCCTCAGCGAGCCGCTCTACTCAGGTTCCAATCAAGGTCCAACACAGAGCAGCTAA
Protein Sequence MRNPRFRIQSKNIFLTYPKCSLTKEHLLDFFRSLSLPTNIKFIKICRELHHNGEPHLHALLQFEGKLTITNNRQFDCVHPSSSTSFHPNIQSAKSSSDVKSYIDKDGDTIDWGEFQIDGRSARGGQQTANDAYAAALNTGSKPEALRVIKELAPKDYVLQFHNLNANLDRIFTPPPEVYVSPFSASSFDQVPDELEEWVSENVMGASARPLRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPRVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEAKNIALKAWALKNATFISLSEPLYSGSNQGPTQSS

NCBI Accession NP_620868.1
Location 2143-2445
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGGAACCTCACCTCCATGCTCTGCTTCAGTTCGAAGGGAAGCTCACGATCACAAACAATCGGCAATTCGATTGTGTACACCCAAGCAGTAGCACCAGTTTCCACCCCAACATACAGAGCGCTAAGTCCAGCTCAGACGTCAAGTCCTACATCGACAAGGATGGAGACACCATCGACTGGGGTGAGTTTCAGATCGATGGAAGATCTGCAAGAGGGGGACAGCAGACAGCCAACGACGCTTACGCCGCAGCACTTAACACAGGCAGTAAGCCAGAGGCTCTTAGAGTCATTAAGGAGTTAG
Protein Sequence MGNLTSMLCFSSKGSSRSQTIGNSIVYTQAVAPVSTPTYRALSPAQTSSPTSTRMETPSTGVSFRSMEDLQEGDSRQPTTLTPQHLTQAVSQRLLESLRS

NCBI Accession NP_620869.1
Location 185-1123
Gene Name BV1
Protein Name nuclear shuttle protein
Coding Region ATGAGTGAGGGCCCTATGTGTGGATATCTAACCGCATATTGTGCGAATGGATTAAACGTGGCAAGATCATGCCGTTTATTGGGAACTATATTATTATGCTGTGGTCTATATATATGGGTATGTCGTGTATTGAGATCTGCACATGGTTGTTTCAGGATGAGAAGAGGTGCTTATACCCCCCGTTCTACGCCATTCCCTCGTGACCGGAGATCGTATAATGCCGGTAAGGGTAGATCCTTTCGTTCGTACCGTCGTCGTGGACCTGTTCGTCCATTAGCTCGTCGGAACCTGTTTGGTGATGACCATGCACGTGCATTCACGTATAAGACCTTATCGGAGGATCAATTTGGACCGGACTTTACCATACATAATAATAATTATAAGTCATCTTATATATCTATGCCTGCCAAAACACGTGCCCTTAGCGATAACAGGGTAGGTGATTATATCAAACTTGTAAATATATCATTTACAGGTACAGTGTGTATAAAAAACAGCCAGATGGAGTCTGACGGAAGCCCAATGTTGGGCCTGCATGGGCTGTTTACTTGTGTATTGGTCCGGGATAAGACCCCTCGTATATATTCTGCCACTGAGCCTTTGATACCTTTCCCACAGTTGTTTGGGTCCATAAACGCGAGCTATGCGGATTTGTCTATACAAGACCCATATAAGGATCGATTCACAGTTATCCGTCAGGTGTCTTACCCAGTTAATACGGAGAAGGGTGATCATATGTGTCGTTTCAAAGGCACTCGTCGTTTTGTTGGTAGATACCCTATCTGGACTAGTTTTAAAGATGATGGTGGCAGTGGAGATTCATCGGGATTATATAGTAATACGTATAAAAATGCCATACTTGTATATTATGTATGGCTCAGCGACGTATCGTCACAATTGGAAATGTATTGTAAATATGTAACTCGATATATTGGTTAA
Protein Sequence MSEGPMCGYLTAYCANGLNVARSCRLLGTILLCCGLYIWVCRVLRSAHGCFRMRRGAYTPRSTPFPRDRRSYNAGKGRSFRSYRRRGPVRPLARRNLFGDDHARAFTYKTLSEDQFGPDFTIHNNNYKSSYISMPAKTRALSDNRVGDYIKLVNISFTGTVCIKNSQMESDGSPMLGLHGLFTCVLVRDKTPRIYSATEPLIPFPQLFGSINASYADLSIQDPYKDRFTVIRQVSYPVNTEKGDHMCRFKGTRRFVGRYPIWTSFKDDGGSGDSSGLYSNTYKNAILVYYVWLSDVSSQLEMYCKYVTRYIG

NCBI Accession NP_620870.1
Location 1132-1992
Gene Name BC1
Protein Name movement protein
Coding Region ATGGAGAATAATAGTAGCAATGCAGCGTATCTTCGTTCCGAAAGAGTTGAATATGAGTTAACCAATGACTCAACAGACGTCAAGTTAAGCTTTCCATCTCTTCTGGATACCAAAATATCGCTCCTCAAGGGTCACTGCTGCAAAATAGACCACATCGTCCTAGAGTATAGAAACCAGGTACCCATTAACGCCACAGGGCATGTCATCATTGAAATTCACGACCAAAGACTGCATGACGGAGACTCAAAACAGGCTGAATTTACTATTCCCGTCCAATGCAATTGCAACCTTCACTACTATTCTTCATCGTTCTTCTCCATGAAGGACATAAACCCATGGAGGGTTATGTACAGAGTCGTAGACACAAACGTCATCAACGGGGTCCACTTCTGCCGTATACAGGGCAAACTCAAGCTGTCAACTGCAAAGCAGTCTAATGACATACAGTTCAGATCTCCCAAAATCGAGATACTGAGCAAGGCCTTCACTGAGAGGGACATTGATTTCTGGTCAGTGGGTCCAAAAGCCCAGCAGAGGAAACTGGTCCAAGGCCCAAGTCTAATAGGATCCCGCTCCAAGAGATATGCTCCATGTTCCATAGGCCCAAATGAATCATGGGCCGTTAGAAGCGAGATTGGGCTTAACGGGCCATGGGCCGTTACGAGCGAGGCTGGGCCATCATTTGAAAGGCCTTACAGCCAACTAAACCGGCTCAACCCAGACGCATTGGACCCAGGAAAGTCAGTATCACAAGTAGGATCGAACCACTTCACACGAGAGGACTTAAACGACATCATCAGCAAGACAGTAGATATGTGTTTAAATACGAGTATGCAAAGTCATGTATCCAAAAATGTATAA
Protein Sequence MENNSSNAAYLRSERVEYELTNDSTDVKLSFPSLLDTKISLLKGHCCKIDHIVLEYRNQVPINATGHVIIEIHDQRLHDGDSKQAEFTIPVQCNCNLHYYSSSFFSMKDINPWRVMYRVVDTNVINGVHFCRIQGKLKLSTAKQSNDIQFRSPKIEILSKAFTERDIDFWSVGPKAQQRKLVQGPSLIGSRSKRYAPCSIGPNESWAVRSEIGLNGPWAVTSEAGPSFERPYSQLNRLNPDALDPGKSVSQVGSNHFTREDLNDIISKTVDMCLNTSMQSHVSKNV

References More References in PubMed

1

Detection of Sri Lankan cassava mosaic virus by loop-mediated isothermal amplification using dried reagents.

Uke A, et al.  J Virol Methods. 2022 Jan;299:114336. doi: 10.1016/j.jviromet.2021.114336. Epub 2021 Oct 14.

PMID: 34656701
2

Metabolic profiles of Sri Lankan cassava mosaic virus-infected and healthy cassava (Manihot esculenta Crantz) cultivars with tolerance and susceptibility phenotypes.

Chaowongdee S, et al.  BMC Plant Biol. 2023 Apr 5;23(1):178. doi: 10.1186/s12870-023-04181-3.

PMID: 37020181
3

Differential transmission of Sri Lankan cassava mosaic virus by three cryptic species of the whitefly Bemisia tabaci complex.

Chi Y, et al.  Virology. 2020 Jan 15;540:141-149. doi: 10.1016/j.virol.2019.11.013. Epub 2019 Nov 24.

PMID: 31794888
4

Surveillance for Sri Lankan cassava mosaic virus (SLCMV) in Cambodia and Vietnam one year after its initial detection in a single plantation in 2015.

Minato N, et al.  PLoS One. 2019 Feb 22;14(2):e0212780. doi: 10.1371/journal.pone.0212780. eCollection 2019.

PMID: 30794679
5

Enhancing Plant Resistance to Sri Lankan Cassava Mosaic Virus Using Salicylic Acid.

Pattanavongsawat C, et al.  Metabolites. 2025 Apr 10;15(4):261. doi: 10.3390/metabo15040261.

PMID: 40278390
6

Analysis of proteomic changes in cassava cv. Kasetsart 50 caused by Sri Lankan cassava mosaic virus infection.

Siriwan W, et al.  BMC Plant Biol. 2022 Dec 10;22(1):573. doi: 10.1186/s12870-022-03967-1.

PMID: 36494781
7

High throughput sRNA sequencing revealed gene regulatory role mediated by pathogen-derived small RNAs during Sri Lankan Cassava Mosaic Virus infection in Cassava.

Asha S, et al.  3 Biotech. 2023 Mar;13(3):95. doi: 10.1007/s13205-023-03494-2. Epub 2023 Feb 23.

PMID: 36845076
8

Sri Lankan cassava mosaic virus Silencing Suppressor AC4 Mediates Autophagic Degradation of SGS3/RDR6 Bodies in Plants.

Liu X, et al.  Plant Cell Environ. 2025 Jul;48(7):5369-5382. doi: 10.1111/pce.15511. Epub 2025 Apr 3.

PMID: 40181499
9

Development of a triple antibody sandwich enzyme-linked immunosorbent assay for cassava mosaic disease detection using a monoclonal antibody to Sri Lankan cassava mosaic virus.

Charoenvilaisiri S, et al.  Virol J. 2021 May 18;18(1):100. doi: 10.1186/s12985-021-01572-6.

PMID: 34006310
10

Survey and molecular detection of Sri Lankan cassava mosaic virus in Thailand.

Saokham K, et al.  PLoS One. 2021 Oct 11;16(10):e0252846. doi: 10.1371/journal.pone.0252846. eCollection 2021.

PMID: 34634034