Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000843565.1 |
Isolate | Philippines |
Release date | 2015/2/12 |
Submitter | Kon,T., Dolores,L.M., Bajet,N.B., Hase,S., Takahashi,H., Ikegami,M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_006439.1 |
---|---|
Location | 125-463 |
Gene Name | AV2 |
Protein Name | hypothetical protein |
Coding Region | ATGTGGGATCCACTTATGCACGAATTCCCTGAAAGTGTTCATGGTCTACGGTGCATGCTAGCTGTGAAATATCTTCAGGAGGTGGAAAAAACATATTCTCCGGACACAGTCGGCTACGATCTTGTTCGCGATCTTATTCTTGTTCTCCGCGCAAGGAACTATGTCGAAGCGACCAGCCGATATTATCATTTCAACTCCCGCGTCGAAGGTACGCCGACGTCTCAACTTCGACAGCCCCTATGTTTCCCGTGCAGTTGTCCCCATTGCCCGCGTCACAAAGGGAAAGGCCTGGACAAACAGGCCCATGAACAGAAAACCCAAGATGTACAGGATGTATAG |
Protein Sequence | MWDPLMHEFPESVHGLRCMLAVKYLQEVEKTYSPDTVGYDLVRDLILVLRARNYVEATSRYYHFNSRVEGTPTSQLRQPLCFPCSCPHCPRHKGKGLDKQAHEQKTQDVQDV |
NCBI Accession | YP_006440.1 |
---|---|
Location | 285-1055 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGACCAGCCGATATTATCATTTCAACTCCCGCGTCGAAGGTACGCCGACGTCTCAACTTCGACAGCCCCTATGTTTCCCGTGCAGTTGTCCCCATTGCCCGCGTCACAAAGGGAAAGGCCTGGACAAACAGGCCCATGAACAGAAAACCCAAGATGTACAGGATGTATAGAAGTCCCGACGTGCCAAGGGGCTGTGAAGGCCCTTGTAAAGTTCAATCGTTCGAATCTAGGCACGATGTCTCTCATATTGGGAAGGTAATGTGTATCAGCGATGTTACACGAGGAACCGGACTCACACATCGCGTTGGGAAGCGATTTTGTGTGAAATCTGTTTATGTTTTGGGAAAGATATGGATGGATGAAAATATCAAGACTAAAAATCATACTAATAGTGTCATATTTTTTCTGGTTCGAGACCGTCGTCCTACAGGGACCCCTCAGGATTTTGGGGAGGTTTTTAATATGTTCGACAATGAACCGAGCACTGCAACGGTGAAGAACATGCATCGTGATCGATACCAAGTTCTGCGCAAATGGCATGCTACTGTGACGGGAGGAGCATACGCATCAAGGGAGCAAGCATTAGTTAGGAAGTTTGTTAGAGTTAATAGTTATATTGTCTACAATCAACAAGAGGCCGGCAAGTATGAGAATCATACTGAAAATGCATTAATGTTGTATATGGCCTGTACTCATGCATCGAACCCTGTATACGCGACTTTGAAAATCCGGATCTATTTTTATGATTCGGTAACAAATTAA |
Protein Sequence | MSKRPADIIISTPASKVRRRLNFDSPYVSRAVVPIARVTKGKAWTNRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPTGTPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGAYASREQALVRKFVRVNSYIVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | YP_006441.1 |
---|---|
Location | 1052-1462 |
Gene Name | AC3 |
Protein Name | replication enhancer |
Coding Region | ATGATCACGGATTCACGCACAGGGGAGTACATCACTGCGGATCGAGCAGAGAGTGGCGTGTATATCTGGGACGTTCCAAATCCCCTCTATTTCAAAATAATGAAACACGACATCAGACCTTGCCTGGAAGAACACGACATAATCAAAGTGCACATCATGTTCAACCACAACCTGCGGAAAGCACTGGGGCTTCACAAATGTGTTCTAATGTTCCAGATCTGGACGGGCTTACGCCCGCAGACTGGGATTTTCTTGAGAGTCTTTAAAACCCAAGTCCTTAAGTACTTGGACATGTTAGGGGTGATTAGTATTTACAATGTAATAAGAGCTGTTTATCATGTTCTGGACAATGTGTTGGAAAAGACAATTGATGTATGGATAACGTATGATGTGAAATTGAATATATATTAA |
Protein Sequence | MITDSRTGEYITADRAESGVYIWDVPNPLYFKIMKHDIRPCLEEHDIIKVHIMFNHNLRKALGLHKCVLMFQIWTGLRPQTGIFLRVFKTQVLKYLDMLGVISIYNVIRAVYHVLDNVLEKTIDVWITYDVKLNIY |
NCBI Accession | YP_006442.1 |
---|---|
Location | 1197-1601 |
Gene Name | AC2 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCAATCTTTATCACACTCGAAGAACCACTCTATTCCGGTCGCGAAAGAATCGCAACCGCAGAGGAAGAAGAAGAACATCAGGCGCAGACGAATTGATCTACCGTGCGGATGCTCGTATTACATGTCAATAAATTGCCATGATCACGGATTCACGCACAGGGGAGTACATCACTGCGGATCGAGCAGAGAGTGGCGTGTATATCTGGGACGTTCCAAATCCCCTCTATTTCAAAATAATGAAACACGACATCAGACCTTGCCTGGAAGAACACGACATAATCAAAGTGCACATCATGTTCAACCACAACCTGCGGAAAGCACTGGGGCTTCACAAATGTGTTCTAATGTTCCAGATCTGGACGGGCTTACGCCCGCAGACTGGGATTTTCTTGAGAGTCTTTAA |
Protein Sequence | MQSLSHSKNHSIPVAKESQPQRKKKNIRRRRIDLPCGCSYYMSINCHDHGFTHRGVHHCGSSREWRVYLGRSKSPLFQNNETRHQTLPGRTRHNQSAHHVQPQPAESTGASQMCSNVPDLDGLTPADWDFLESL |
NCBI Accession | YP_006443.1 |
---|---|
Location | 1504-2583 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGGCACCTCCAAAGCGTTTTAGAATACAAGCCAAAAACTATTTCCTCACTTATCCCAAATGCTCTCTTACTAAAGAAGAGGCACTTTCCCAATTACAAACCCTAGAAACTCCAACTTCAAAGAAATTTATCAAAATTTGTAGAGAGTTGCACGAAGATGGGTCTCCGCATATCCACGTTCTTATCCAGTTCGAAGGGAAGTTCGTCTGCACGAATAACAGATTCTTCGACTTGGTGTCCCCAAGTCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAAGATGGGGACACACTGGAATGGGGAAAATTCCAGGTCGACGGCAGAAGCGCTAGAGGCGGTCAGCAGTCTGCTAACGACACTGCCGCAAAGGCATTAAATTCAGGTTCAGCCGAAGCAGCTTTAGCAATAATTAGGGAAGAACTACCAAAAGATTTTATTTTTCAATACCATAATATTAAAAATAATTTAGATAGGATTTTTGCACCTCCTGTAGAGGTGTATGTTTCTCCTTTTTCTATTTCATCCTTCGACAAAGTTCCGCAAGAACTCGTCGATTGGGTTTCAGGTAACGTGGTGTGTTCTGCGCGGCCGATTAGACCCATAGGAATAGTTTTAGAGGGTGATAGTAGAACGGGCAAAACTGCGTGGGCGCGTTCTTTGGGGACACAATTACTTGTGCGGCCACTTGACTTAAGTCCAAAGGTGTACAGTAATGATGCTTGGTACAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCATTTTAAAGAATTCATGGGGGCCCAGAGAGACTGGCAAAGCAACACGAAGTACGGAAAGCCAGTCATGATTAAAGGTGGAATTCCCACCATCTTCCTCTGCAATCCGGGACCAAACAGCAGTTATAAAGAGTATCTCGATGAAGATAAGAATGCAGCACTTAAGCAGTGGGCATTAAAGAATGCAATCTTTATCACACTCGAAGAACCACTCTATTCCGGTCGCGAAAGAATCGCAACCGCAGAGGAAGAAGAAGAACATCAGGCGCAGACGAATTGA |
Protein Sequence | MAPPKRFRIQAKNYFLTYPKCSLTKEEALSQLQTLETPTSKKFIKICRELHEDGSPHIHVLIQFEGKFVCTNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGKFQVDGRSARGGQQSANDTAAKALNSGSAEAALAIIREELPKDFIFQYHNIKNNLDRIFAPPVEVYVSPFSISSFDKVPQELVDWVSGNVVCSARPIRPIGIVLEGDSRTGKTAWARSLGTQLLVRPLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVMIKGGIPTIFLCNPGPNSSYKEYLDEDKNAALKQWALKNAIFITLEEPLYSGRERIATAEEEEEHQAQTN |
NCBI Accession | YP_006444.1 |
---|---|
Location | 484-1290 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGGCCTTTACGACATCTTATACTCCTGCAAGACGATATTCATACTCAACAAATAGACAACCTAACGCAAGCAGGAGATGGAAATTTTGCAGATCTCGGAAATACCATGGATTGATGCGTTATCGGAATTTGTATTCCGCAAGCAAGACCTCAACTGACTTGTTCGGTGATCCTATCTCCAGGCAATACACGCGCAAGGAAATTTGTGAAACTCAACAGGGATCTGAATATGTTCTCCAGAACAATCGCTACATGACTACATATGTTACGTATCCTGCTAAAACCCGAACTGGAACGAATAACAGGGTTCGTTCATACATCAAGCTCACAGGCCTTACCATGTCCGGAACATTTGGCATTCGATGTTCCGAATTAATGACGGATGTGATCAACCCACTGGACTTTATGGCGTTGTATCGATTGTTATCGTCCGGGATAAATCACCAAAGATTTATTCAACTGTACAACCACTCATGCCTTTTGTTGATTTGTTTGGTTCTGTTAGTGCCTGTCGTGGGACTCTTAAGGTGGCAGAACGACAGACACGAGAAGGTTTGTGGTGCTCAATCAAACGTCCATACTGATAAATACGCCTCATTGCAACGCATGAAGAAATTCTCAATTCGAAACTGCATCCCGCGCACCTACTCTACCTGGGCTACGTTCAAGGACGAAGAAGAGGATAGTTCTACTGGGCTATACTCAAACACTCTGCGAAATGCTATACTTATATATTATGTATGGTTAAGCGATGTACCTTCTCAACTGGACATGTACAGCAATGTAATGTTAAATTACATTGGTTAG |
Protein Sequence | MAFTTSYTPARRYSYSTNRQPNASRRWKFCRSRKYHGLMRYRNLYSASKTSTDLFGDPISRQYTRKEICETQQGSEYVLQNNRYMTTYVTYPAKTRTGTNNRVRSYIKLTGLTMSGTFGIRCSELMTDVINPLDFMALYRLLSSGINHQRFIQLYNHSCLLLICLVLLVPVVGLLRWQNDRHEKVCGAQSNVHTDKYASLQRMKKFSIRNCIPRTYSTWATFKDEEEDSSTGLYSNTLRNAILIYYVWLSDVPSQLDMYSNVMLNYIG |
NCBI Accession | YP_006445.1 |
---|---|
Location | 1344-2189 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGTCAATAAGAAATGATAACATGGGTCTTGGAGTTGGGGGATACATAGAATCCGATCGCGTAGAATACGCTCTCACGAACGACGTTGCGGAGTTCACTCTGACGTTCCCTTCCATGTTCGAACAGAAGATCAGTCAATTGAGAAACAGATGCATGAAAATTGATCACGTCCTTCTTGAATATCGCAGCCAAGTACCAATAAATGCAGTCGGACATGTGGTCATTGAGATTCACGACATGAGATTGACAGAGGGAGACACAAAACAAGCTGAGTTCACGATTCCGATAAGATGCAACTGCAATTTGCATTACTACTCATCCACATACTTCTCCGTTAAGGATAGGAATCCTTGGAGAGTTGAGTACAGAGTTGAGAACACGAACGTAGTGAATGGAGTTCATTTCTGTAAGATGCTCGGTAAATTAAAACTATCCTCGGCCAAACATTCAACTGACGTCGAATTCCGAGCACCAAGAATAGAGATACAGAGCAAAGAATTCACTGTTAACGACATAGATTTCTGGTCTGTTGGCTCAAAACCACAAACAAGACGGCTCGTCGACGGGTCGAGACTCCTGGGTCACAGTTCAAGATCGTTGCGCGTCCCACATTTTGCAATCGGTCCGAACGAATCGTGGGCAAATAGATCGGAAATTGGGCTGGGTTCCGTGACCAGCAGACCGTATAAAAACCTGAGCGGATTGGACGAATCCGCAATAGATCCTGGTCCATCGGCATCACAGATAGGAAGCATCACGAAGGAGGAGATAACTGACATAATAACTAAAACGGTAGAACAATGTATAAAATCGAATGTAAACGCTTCATTAACTAAAGGAGTGTGA |
Protein Sequence | MSIRNDNMGLGVGGYIESDRVEYALTNDVAEFTLTFPSMFEQKISQLRNRCMKIDHVLLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIRCNCNLHYYSSTYFSVKDRNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRAPRIEIQSKEFTVNDIDFWSVGSKPQTRRLVDGSRLLGHSSRSLRVPHFAIGPNESWANRSEIGLGSVTSRPYKNLSGLDESAIDPGPSASQIGSITKEEITDIITKTVEQCIKSNVNASLTKGV |
1 |
Occurrence and Molecular Characterization of Squash leaf curl Phillipines virus in Taiwan. Tsai WS, et al. Plant Dis. 2007 Jul;91(7):907. doi: 10.1094/PDIS-91-7-0907A. PMID: 30780410 |
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2 |
First Report of Squash leaf curl Philippines virus Infecting Chayote (Sechium edule) in Taiwan. Tsai WS, et al. Plant Dis. 2011 Sep;95(9):1197. doi: 10.1094/PDIS-04-11-0282. PMID: 30732043 |
3 |
Identification of an emerging cucumber virus in Taiwan using Oxford nanopore sequencing technology. Dong ZX, et al. Plant Methods. 2022 Dec 22;18(1):143. doi: 10.1186/s13007-022-00976-x. PMID: 36550551 |
4 |
Neoh ZY, et al. Plants (Basel). 2023 Jan 6;12(2):272. doi: 10.3390/plants12020272. PMID: 36678986 |
5 |
Chen YK, et al. Plant Dis. 2022 May 12. doi: 10.1094/PDIS-12-21-2827-PDN. Online ahead of print. PMID: 35549322 |