Bean leaf crumple virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_004787795.1 |
| Isolate |
Colombia |
| Release date |
2019/6/28 |
| Submitter |
Carvajal-Yepes,M., Zambrano,L., Bueno,J.M., Raatz,B., Cuellar,W.J. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCCGATTTTTGGTGTCCCCCACGTGTCCAAATCCCCGCATTCTCACCTCGCACCTAAAATGACAAGTAAAGCTGAACAATCAGCACGCGTCTGTACAGCCAACATATTTAAGACTTAGCGCCTAAGTTGTGGGCCTATAAATAAAGATACTTGTCATTTTATCCTTTAATTCAAAATGGTGAAGAGGGATGCCCCATGGCGTAATATGGCGGGGACCTCGAAGGTTAGCCGCAACGTCAATTATTCACCTCGTAGTGGATTGGGCTTTCAATCCAACAAGGCCGCTGCTTGGGTGAACAGGCCCATGTACAGGAAGCCCCGGATATATCGAATGTACAGAACCCCCGATGTGCCCAAGGGCTGTGAGGGCCCTTGCAAGGTCCAGTCTTACGAGCAGCGGCATGATATATCTCATGTTGGGAAGGTGATGTGTATTTCCGACGTCACACGTGGAAATGGTATCACTCACCGCGTTGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATACTAGGCAAGATATGGATGGACGAGAACATCAAGCTCAAGAACCACACAAACAGTGTCATGTTTTGGTTGGTCAGAGATCGTAGACCGTATGGCACCCCTATGGAATTTGGTCAGGTGTTCAACATGTTCGATAATGAGCCCAGTACAGCCACTGTTAAGAACGATCTTCGTGATCGTTATCAGGTTATGCACAAGTTCTATGCTAAGGTGACTGGTGGACAATATGCGAGCAATGAACAGGCGCTGGTCAAGCGGTTTTGGAAAGTAAACAATCATGTGGTGTACAACCACCAGGAAGCAGGGAAATACGAGAATCATACGGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCGACATTGAAAATTCGGATCTATTTTTACGATTCGATAACCAATTAATAAAACTTGAATTTTATTTCATGATTCTCGAGTATATAATTTACATAAGATTTGTCTGTTGCAAAACGAACAGCTCTTATTACATTGTTAATACCGATAACGCCAATCCTATCCAAATACAACAAGACTAAATATCTAAAGCGATTTAAATATGTCGTCCCAGAAGCCCGAACTAATGTTGTCCAAACTTGGAAGTTCAGGAATGCTTTGTGTAGACCCAGCTCCTTCCTGAGGTTGTGGTTGAATCGGACTTGGATGTGATATATCCTTGTCCTTGTGTATAGTGGATCCTCGACGAGGTTCATCTTGAAATAGAGGGGATTTGGAACCTCCCAGATAAAAACGGAATTCTCTGCTTGATGCGCAGTGATGCTCTCCCCTGTGCGTGAATCCATTGTCTGCACAGTTGATATGGAGGAATATGGAACAGCCGCAGTTCAAGTCTATCCTTCTTCGACGAATGGGTCTTCTTTTAGCGATCCTGTGCTGTGCTTTGATAGAGGGGGGCGTTGAGGAAGATGAATTTTGCATTTTTGAGAGTCCAGTTTTGTAGTGGTGCATTTTCCTCTTTGTCGAGAAAATCTTTATAACTGGCCCCCTCGCCTGGATTGCACAGCACGATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATATTTACAGTTCGATTGCCAGTCCTTTTGGGCCCCTATCAATTCTTTCCAGTGCTTTAGCTTTAGGTAGTTGGGCGCAACGTCATCGATAACGTTATACTCAGCCTCGTTGGAATACACTCGAGAATTGAAATCCAAGTGACCGCTCAAGTAATTATGTGGGCCTAGAGCACGTGCCCACATTGTTTTGCCGGTTCGACTATCCCCTTCGATGAATATACTAATAGGTCTATCTGTCCGCGCAGCGGCCCCCCTCCCGAAATAATCATCAGCCCAGGCTTGCATCTCAGACGGAACGTTAGTAAAGGACGAGAGTTGAAACGGAGGAGCCCATGGTTCCGGAGCTTTTTGAAATAGGCTCTCGATGTTAGCCTTGACATGATGATAACTGACTACGAACGTCTTTGGATCTCCGACCTTGATAATGTCGAGAGCCTCTCCCGCACTTCCTGCATTGATGGCGTTATAATAGACGACTTCTTTATTTGATTTGGAACCCCCAGACACTTTATATTGCCCGGATTCACAATAATCACCCTCTTTGGTGATGTAATTCTTGACGGCATTGGTGTCTTTGGCTGCCTGAATGTTTGGGTGAAAACGGGCAGACCGTCTGGGGTGAGTAAGGTCGAAAAATCTAACATCCTTGATGTTGGGCTTACCGGATAGTTGTACAAGGCAGTGTAAGTGCGGGAACCCGTCGGAATGTTCCTCTCTGGCGACTCTGATGTACGTGGGTTTGACGATCGACCAGGACAGATGTTGAAGCATTTGAAGAGCTTCATCTTTCGATATGTCGCACTGGGGATATGTTAAGAAAATGTTTTTGGCTACTAAACGAAATGAACTGGTGTTCCGTGGCATTTTCTGTAAATAACAGTGAAGACACCACGGGAGCTCTCGTCTAAAAGTCTATATTCGTGGTGTCTTGGTGTCCCATTTATACTAAAACCCTCTGGGGGACACTAGGGGCAAAATAGGCCATCCGAAATAATATT
Gene Information
|
NCBI Accession
|
YP_009666506.1
|
|
Location
|
187-942 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGGTGAAGAGGGATGCCCCATGGCGTAATATGGCGGGGACCTCGAAGGTTAGCCGCAACGTCAATTATTCACCTCGTAGTGGATTGGGCTTTCAATCCAACAAGGCCGCTGCTTGGGTGAACAGGCCCATGTACAGGAAGCCCCGGATATATCGAATGTACAGAACCCCCGATGTGCCCAAGGGCTGTGAGGGCCCTTGCAAGGTCCAGTCTTACGAGCAGCGGCATGATATATCTCATGTTGGGAAGGTGATGTGTATTTCCGACGTCACACGTGGAAATGGTATCACTCACCGCGTTGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATACTAGGCAAGATATGGATGGACGAGAACATCAAGCTCAAGAACCACACAAACAGTGTCATGTTTTGGTTGGTCAGAGATCGTAGACCGTATGGCACCCCTATGGAATTTGGTCAGGTGTTCAACATGTTCGATAATGAGCCCAGTACAGCCACTGTTAAGAACGATCTTCGTGATCGTTATCAGGTTATGCACAAGTTCTATGCTAAGGTGACTGGTGGACAATATGCGAGCAATGAACAGGCGCTGGTCAAGCGGTTTTGGAAAGTAAACAATCATGTGGTGTACAACCACCAGGAAGCAGGGAAATACGAGAATCATACGGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCGACATTGAAAATTCGGATCTATTTTTACGATTCGATAACCAATTAA |
|
Protein Sequence
|
MVKRDAPWRNMAGTSKVSRNVNYSPRSGLGFQSNKAAAWVNRPMYRKPRIYRMYRTPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMEFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
|
NCBI Accession
|
YP_009666507.1
|
|
Location
|
939-1337 |
|
Gene Name
|
AC3 |
|
Protein Name
|
replication enhancement protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAGAGCATCACTGCGCATCAAGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATGAACCTCGTCGAGGATCCACTATACACAAGGACAAGGATATATCACATCCAAGTCCGATTCAACCACAACCTCAGGAAGGAGCTGGGTCTACACAAAGCATTCCTGAACTTCCAAGTTTGGACAACATTAGTTCGGGCTTCTGGGACGACATATTTAAATCGCTTTAGATATTTAGTCTTGTTGTATTTGGATAGGATTGGCGTTATCGGTATTAACAATGTAATAAGAGCTGTTCGTTTTGCAACAGACAAATCTTATGTAAATTATATACTCGAGAATCATGAAATAAAATTCAAGTTTTATTAA |
|
Protein Sequence
|
MDSRTGESITAHQAENSVFIWEVPNPLYFKMNLVEDPLYTRTRIYHIQVRFNHNLRKELGLHKAFLNFQVWTTLVRASGTTYLNRFRYLVLLYLDRIGVIGINNVIRAVRFATDKSYVNYILENHEIKFKFY |
|
NCBI Accession
|
YP_009666508.1
|
|
Location
|
1078-1602 |
|
Gene Name
|
AC2 |
|
Protein Name
|
transactivator protein |
|
Coding Region
|
ATGGAAAGCCGGTTCAAATTAAAGGTGGAATCCCATCAATCGTGCTGTGCAATCCAGGCGAGGGGGCCAGTTATAAAGATTTTCTCGACAAAGAGGAAAATGCACCACTACAAAACTGGACTCTCAAAAATGCAAAATTCATCTTCCTCAACGCCCCCCTCTATCAAAGCACAGCACAGGATCGCTAAAAGAAGACCCATTCGTCGAAGAAGGATAGACTTGAACTGCGGCTGTTCCATATTCCTCCATATCAACTGTGCAGACAATGGATTCACGCACAGGGGAGAGCATCACTGCGCATCAAGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATGAACCTCGTCGAGGATCCACTATACACAAGGACAAGGATATATCACATCCAAGTCCGATTCAACCACAACCTCAGGAAGGAGCTGGGTCTACACAAAGCATTCCTGAACTTCCAAGTTTGGACAACATTAGTTCGGGCTTCTGGGACGACATATTTAAATCGCTTTAG |
|
Protein Sequence
|
MESRFKLKVESHQSCCAIQARGPVIKIFSTKRKMHHYKTGLSKMQNSSSSTPPSIKAQHRIAKRRPIRRRRIDLNCGCSIFLHINCADNGFTHRGEHHCASSREFRFYLGGSKSPLFQDEPRRGSTIHKDKDISHPSPIQPQPQEGAGSTQSIPELPSLDNISSGFWDDIFKSL |
|
NCBI Accession
|
YP_009666509.1
|
|
Location
|
1415-2464 |
|
Gene Name
|
AC1 |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGCCACGGAACACCAGTTCATTTCGTTTAGTAGCCAAAAACATTTTCTTAACATATCCCCAGTGCGACATATCGAAAGATGAAGCTCTTCAAATGCTTCAACATCTGTCCTGGTCGATCGTCAAACCCACGTACATCAGAGTCGCCAGAGAGGAACATTCCGACGGGTTCCCGCACTTACACTGCCTTGTACAACTATCCGGTAAGCCCAACATCAAGGATGTTAGATTTTTCGACCTTACTCACCCCAGACGGTCTGCCCGTTTTCACCCAAACATTCAGGCAGCCAAAGACACCAATGCCGTCAAGAATTACATCACCAAAGAGGGTGATTATTGTGAATCCGGGCAATATAAAGTGTCTGGGGGTTCCAAATCAAATAAAGAAGTCGTCTATTATAACGCCATCAATGCAGGAAGTGCGGGAGAGGCTCTCGACATTATCAAGGTCGGAGATCCAAAGACGTTCGTAGTCAGTTATCATCATGTCAAGGCTAACATCGAGAGCCTATTTCAAAAAGCTCCGGAACCATGGGCTCCTCCGTTTCAACTCTCGTCCTTTACTAACGTTCCGTCTGAGATGCAAGCCTGGGCTGATGATTATTTCGGGAGGGGGGCCGCTGCGCGGACAGATAGACCTATTAGTATATTCATCGAAGGGGATAGTCGAACCGGCAAAACAATGTGGGCACGTGCTCTAGGCCCACATAATTACTTGAGCGGTCACTTGGATTTCAATTCTCGAGTGTATTCCAACGAGGCTGAGTATAACGTTATCGATGACGTTGCGCCCAACTACCTAAAGCTAAAGCACTGGAAAGAATTGATAGGGGCCCAAAAGGACTGGCAATCGAACTGTAAATATGGAAAGCCGGTTCAAATTAAAGGTGGAATCCCATCAATCGTGCTGTGCAATCCAGGCGAGGGGGCCAGTTATAAAGATTTTCTCGACAAAGAGGAAAATGCACCACTACAAAACTGGACTCTCAAAAATGCAAAATTCATCTTCCTCAACGCCCCCCTCTATCAAAGCACAGCACAGGATCGCTAA |
|
Protein Sequence
|
MPRNTSSFRLVAKNIFLTYPQCDISKDEALQMLQHLSWSIVKPTYIRVAREEHSDGFPHLHCLVQLSGKPNIKDVRFFDLTHPRRSARFHPNIQAAKDTNAVKNYITKEGDYCESGQYKVSGGSKSNKEVVYYNAINAGSAGEALDIIKVGDPKTFVVSYHHVKANIESLFQKAPEPWAPPFQLSSFTNVPSEMQAWADDYFGRGAAARTDRPISIFIEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNEAEYNVIDDVAPNYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENAPLQNWTLKNAKFIFLNAPLYQSTAQDR |
|
NCBI Accession
|
YP_009666510.1
|
|
Location
|
1993-2385 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 |
|
Coding Region
|
ATGAAGCTCTTCAAATGCTTCAACATCTGTCCTGGTCGATCGTCAAACCCACGTACATCAGAGTCGCCAGAGAGGAACATTCCGACGGGTTCCCGCACTTACACTGCCTTGTACAACTATCCGGTAAGCCCAACATCAAGGATGTTAGATTTTTCGACCTTACTCACCCCAGACGGTCTGCCCGTTTTCACCCAAACATTCAGGCAGCCAAAGACACCAATGCCGTCAAGAATTACATCACCAAAGAGGGTGATTATTGTGAATCCGGGCAATATAAAGTGTCTGGGGGTTCCAAATCAAATAAAGAAGTCGTCTATTATAACGCCATCAATGCAGGAAGTGCGGGAGAGGCTCTCGACATTATCAAGGTCGGAGATCCAAAGACGTTCGTAG |
|
Protein Sequence
|
MKLFKCFNICPGRSSNPRTSESPERNIPTGSRTYTALYNYPVSPTSRMLDFSTLLTPDGLPVFTQTFRQPKTPMPSRITSPKRVIIVNPGNIKCLGVPNQIKKSSIITPSMQEVRERLSTLSRSEIQRRS |