Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000889935.1 |
Isolate | Nigeria |
Release date | 2015/2/22 |
Submitter | Alabi,O.J., Kumar,P.L., Mgbechi-Ezeri,J.U., Naidu,R.A. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_003622554.1 |
---|---|
Location | 239-559 |
Gene Name | AC4_5_2 |
Protein Name | hypothetical protein |
Coding Region | ATGTGTCAATCCGGACCCACGAGTAATATCGGAACAGCAGAGAACTGTACCCGTGTGACTAACGTCATGCTTGGCGTCATACGACTGGACCTTACAAGGCCCTTCACAGCCGAAGGGCACATCTGGACTCCTCCACATCCTGTACATCATGGGCTTCCGATACATGGGCCGATTCTCCCAGGCCCTCTTCTTGTTGGTCCTGGGGATGGCAGTGGGCATGGCACGTGGACTGTCGAAGTTCAACCTCCTCCGAACCTTCGACAAAGGTGTAGAAATTACGATATCGGCGTTTCGCTTCATGATATTTCCTTCCGTGAATAA |
Protein Sequence | MCQSGPTSNIGTAENCTRVTNVMLGVIRLDLTRPFTAEGHIWTPPHPVHHGLPIHGPILPGPLLVGPGDGSGHGTWTVEVQPPPNLRQRCRNYDIGVSLHDISFRE |
NCBI Accession | YP_003622555.1 |
---|---|
Location | 260-1021 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGAAGCGAAACGCCGATATCGTAATTTCTACACCTTTGTCGAAGGTTCGGAGGAGGTTGAACTTCGACAGTCCACGTGCCATGCCCACTGCCATCCCCAGGACCAACAAGAAGAGGGCCTGGGAGAATCGGCCCATGTATCGGAAGCCCATGATGTACAGGATGTGGAGGAGTCCAGATGTGCCCTTCGGCTGTGAAGGGCCTTGTAAGGTCCAGTCGTATGACGCCAAGCATGACGTTAGTCACACGGGTACAGTTCTCTGCTGTTCCGATATTACTCGTGGGTCCGGATTGACACATCGTGTCGGCAAAAGGTTTACCATCAAGTCCATTCTTTTGATGGGCAAGATTTGGATGGACGACAATATCAAATTAAAGAACCACACTAATATCGTCACCTTTTTTTTAGTGCGCGATAGGCGCCCATCTGACAAGCCATATTCATTTGGCAGTGTGTTCAACATGTTCGACAATGAACCCACGACAGCGACAGTTAAACAAGATAACCGCGATCGATCCCAAGTTATTCGTAAGTTTCATGCCACAGTTACTGGTGGCCAATATGCTTCTAAGGAGCAGGCATTGGTGAAGAAATTTTTTAAAATTAATCACAAGGTCGTCTACAACAATCAGGAAGGTGCGGAGTACAAGAACCACCAGGAGAATGCTTTGCTTCTCTATATGGCATGTAGTCATGCTTCTAACCCAGTGTATGCTACTATTAAGGCTCGTGTGTATTTTTATGATTCAGTCACAAATTAA |
Protein Sequence | MKRNADIVISTPLSKVRRRLNFDSPRAMPTAIPRTNKKRAWENRPMYRKPMMYRMWRSPDVPFGCEGPCKVQSYDAKHDVSHTGTVLCCSDITRGSGLTHRVGKRFTIKSILLMGKIWMDDNIKLKNHTNIVTFFLVRDRRPSDKPYSFGSVFNMFDNEPTTATVKQDNRDRSQVIRKFHATVTGGQYASKEQALVKKFFKINHKVVYNNQEGAEYKNHQENALLLYMACSHASNPVYATIKARVYFYDSVTN |
NCBI Accession | YP_003622556.1 |
---|---|
Location | 701-955 |
Gene Name | AC5 |
Protein Name | hypothetical protein |
Coding Region | ATGACTACATGCCATATAGAGAAGCAAAGCATTCTCCTGGTGGTTCTTGTACTCCGCACCTTCCTGATTGTTGTAGACGACCTTGTGATTAATTTTAAAAAATTTCTTCACCAATGCCTGCTCCTTAGAAGCATATTGGCCACCAGTAACTGTGGCATGAAACTTACGAATAACTTGGGATCGATCGCGGTTATCTTGTTTAACTGTCGCTGTCGTGGGTTCATTGTCGAACATGTTGAACACACTGCCAAATGA |
Protein Sequence | MTTCHIEKQSILLVVLVLRTFLIVVDDLVINFKKFLHQCLLLRSILATSNCGMKLTNNLGSIAVILFNCRCRGFIVEHVEHTAK |
NCBI Accession | YP_003622557.1 |
---|---|
Location | 1018-1431 |
Gene Name | AC3 |
Protein Name | replication enhancer |
Coding Region | ATGGATTTACGCACAGGGGAATCCATCACTGCAGTTCAAGCCGGGAATGGCGTCTATATCTGGGCGGTCCCAAATCCTCTGCACTTCAAAGTGATCGAGCATCACATGAATATTCCGGGGTTGCCATACAACATAATCAAGCTTCGAGTGCAGTTCAACCACAACCTCCGGAGAGCATTAGGACTCCACAAGTGCTGGATAACCTTGACGATATTAACGCGATTGACCCGCTCTACCAATCCGACTGGGATTTTCTTGAGGGTCTTTAAGACTCAAGTGTTGCGTTATTTAGATTCAATTCATGTAATTTCGATTAATGGAGTTATAAGAGCCATTAATCATTGTTTGTACGATGTACTTGTTGGCACTGAAGAAGTGCGTACCAAATATGAAATAAAATTCAATCTTTATTAA |
Protein Sequence | MDLRTGESITAVQAGNGVYIWAVPNPLHFKVIEHHMNIPGLPYNIIKLRVQFNHNLRRALGLHKCWITLTILTRLTRSTNPTGIFLRVFKTQVLRYLDSIHVISINGVIRAINHCLYDVLVGTEEVRTKYEIKFNLY |
NCBI Accession | YP_003622558.1 |
---|---|
Location | 1163-1579 |
Gene Name | AC2 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCGATCTTCGTCAGCATCGCCTTCCCACTCTACAGCAGTCCCGATCAAGGTAAGACATCGCCAGGCGAAGAAGAGGCAAATCCGACGCCGCCGTGTTGATCTACGCTGTGGCTGTTCCTATTTCGTCTCAATTAATTGCGCAAACCATGGATTTACGCACAGGGGAATCCATCACTGCAGTTCAAGCCGGGAATGGCGTCTATATCTGGGCGGTCCCAAATCCTCTGCACTTCAAAGTGATCGAGCATCACATGAATATTCCGGGGTTGCCATACAACATAATCAAGCTTCGAGTGCAGTTCAACCACAACCTCCGGAGAGCATTAGGACTCCACAAGTGCTGGATAACCTTGACGATATTAACGCGATTGACCCGCTCTACCAATCCGACTGGGATTTTCTTGAGGGTCTTTAA |
Protein Sequence | MRSSSASPSHSTAVPIKVRHRQAKKRQIRRRRVDLRCGCSYFVSINCANHGFTHRGIHHCSSSREWRLYLGGPKSSALQSDRASHEYSGVAIQHNQASSAVQPQPPESIRTPQVLDNLDDINAIDPLYQSDWDFLEGL |
NCBI Accession | YP_003622559.1 |
---|---|
Location | 1479-2567 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGCCTAGAAGCGGAGCTTTTAGAGTGAATGCGAAGAATATCTTCCTCACATATCCCAGATGCTCATTATCAAAAGACGAAGCTCTGGAATTACTCAAGGGTATACCAACACCTGTGAACAAGAAGTTCATCAAGGTAGCTAGAGAGCTACACGAAGATGGGCAGCCACATCTCCATGTGCTGCTGCAATTCGAAGGTAAATTCTCCATCAAAAATCCTCGACTGTTCGACCTTGTCTCGAGAGCGTCTGCTCATGTGTTCCACCCAAACGTACAAGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAAGACGGCGACACCGTGTCATGGGGAGAGTTTCAGATCGATGGAAGATCGAGTCGTGGAGGTAAGCAATCTGCGAACGACGCTTACGCCGCAGCAATTAACACGGGCAGTCCGACTAAGGCTCTCCAGTTATTAAAGGAACCATGTCCAAAGGATTATGTATTACAGTTCCACCACCTTAAAGGTAATTTAGAAAGGATTTTCATGAAGGAGCCAACACCATGGGCTTGTCCTTATGATCCCCGTTCATTTAACAACGTCCCGGACGTTATGCTTGATTGGGTGTCTGTTAATGTGAAAGATCCCGCTGCGCGGCCTAACAGACCCATGAGTATCGTCGTTGAAGGTGATTCCAGAACGGGGAAGACGATGTGGGCGCGGTCTTTGGGGGTACACAATTACCTATGTGGTCATCTAGACCTGAGTCCAAAGGTGTACAGCAATAATGCATGGTACAACGTCATCGATGACGTAGATCCGCACTACCTAAAGCACTTCAAGGAATTCATGGGGGCCCAGCATGATTGGCAGAGCAACACGAAATACGGTAAACCGATTCAAATTAAAGGGGGAATTCCCACCATCTTTTTATGCAACCCGGGACACAGTAGCTCTTATAAGAGTTATTTGGATGAAGAGAAAAATTCATCCCTGAAACAGTGGGCATTAAAGAATGCGATCTTCGTCAGCATCGCCTTCCCACTCTACAGCAGTCCCGATCAAGGTAAGACATCGCCAGGCGAAGAAGAGGCAAATCCGACGCCGCCGTGTTGA |
Protein Sequence | MPRSGAFRVNAKNIFLTYPRCSLSKDEALELLKGIPTPVNKKFIKVARELHEDGQPHLHVLLQFEGKFSIKNPRLFDLVSRASAHVFHPNVQGAKSSSDVKSYIDKDGDTVSWGEFQIDGRSSRGGKQSANDAYAAAINTGSPTKALQLLKEPCPKDYVLQFHHLKGNLERIFMKEPTPWACPYDPRSFNNVPDVMLDWVSVNVKDPAARPNRPMSIVVEGDSRTGKTMWARSLGVHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQHDWQSNTKYGKPIQIKGGIPTIFLCNPGHSSSYKSYLDEEKNSSLKQWALKNAIFVSIAFPLYSSPDQGKTSPGEEEANPTPPC |
NCBI Accession | YP_003622560.1 |
---|---|
Location | 2117-2410 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGCAGCCACATCTCCATGTGCTGCTGCAATTCGAAGGTAAATTCTCCATCAAAAATCCTCGACTGTTCGACCTTGTCTCGAGAGCGTCTGCTCATGTGTTCCACCCAAACGTACAAGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAAGACGGCGACACCGTGTCATGGGGAGAGTTTCAGATCGATGGAAGATCGAGTCGTGGAGGTAAGCAATCTGCGAACGACGCTTACGCCGCAGCAATTAACACGGGCAGTCCGACTAAGGCTCTCCAGTTATTAA |
Protein Sequence | MGSHISMCCCNSKVNSPSKILDCSTLSRERLLMCSTQTYKELNPAPTSSPTSTKTATPCHGESFRSMEDRVVEVSNLRTTLTPQQLTRAVRLRLSSY |
NCBI Accession | YP_003622561.1 |
---|---|
Location | 373-1158 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTATACCCGCCATGGAAGACGTCTTTTACGGTCTTCCCCTTATTCACATTTGACGCCTTCAAGTTCATCAAGGCGTCATCAAGAATCGAAGTTCCGTCATGTTACTCGTAACCTAAATGTCTATAGACCATTATTCTCATCGTCTGACAGAGGTGTTTTTAAACGTCGTACATTGGGAGAGGTTCAACACGGTCCGGAGCTAGTGTTGAGAAATGCAACCCATGTGACAACCTATGTGACGTATCCGACTCGATACAGTAATGGTGATGGACGCTGCACTGATTACATCAAGATTTTGAATCTGAAAGTATCCGGACGCATCTGCATACGTGACAATGTTCCCACAGGTGACAAAACAATGGGCGTTTATTCGGGTATATTGGGCACATTCGTCATGTGTTTCATACGTGACAAACGACCGGACGTTCCGGACGGGGCAAATGCTCTGCCTTCATTTAAGGACCTCTTCGGGAACTACGAAGCAGCCTATGCCGATTTACGTATAGTGGATGTTTTACGAGAGCGATTTCGACTTATGTCTTCCATTAAAATTGACGTAACGTCAGATTTAGGTGAATGTCAAAGAACTCTCAAGCATTACTTGCCTGTAAGCTCTCGTAAATTCCCTATTTGGGCAACATTTCGGGACAAGGATCTCTCTATGGCCACTGGAAATTACAAGAACATTCCGAAGAACGCGACGTTAATAAGTTACGCTTGGGTGTCCGAGCGTGACAGCACATGTCAAATATATTCCCAAATGTTGCTTAGTTATTTAGGATAA |
Protein Sequence | MYTRHGRRLLRSSPYSHLTPSSSSRRHQESKFRHVTRNLNVYRPLFSSSDRGVFKRRTLGEVQHGPELVLRNATHVTTYVTYPTRYSNGDGRCTDYIKILNLKVSGRICIRDNVPTGDKTMGVYSGILGTFVMCFIRDKRPDVPDGANALPSFKDLFGNYEAAYADLRIVDVLRERFRLMSSIKIDVTSDLGECQRTLKHYLPVSSRKFPIWATFRDKDLSMATGNYKNIPKNATLISYAWVSERDSTCQIYSQMLLSYLG |
NCBI Accession | YP_003622562.1 |
---|---|
Location | 1219-2310 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGTTGAGATCGTTAATGTTAATTGAAAACTTTAAATGTTTTCATGTTGGTTCTTTGAACTTTTGTGAAGGTATATGTCTTTCTTCTCAGAAATTACTGTCTGATTTGTTCTGTTATTTGTTTCACATTTGGGTTCTGCTGAACTTCAGGGAAAATCGTGGCGCTGCGCGGCCAGATTTCGGAATGGAAGACTTCTCAGTCGTGTCGAACAAATACATTGAGTCACGCAGAAACGAGTATGCCCTTACCAATGATGCGACAACGATCAAACTAGAGTTTCCAACAACTCTAGAACAGGCGACTGTTCGTCTTAAGGGCAAGTGCATGAAAATAGATCACATAGTGATCGAGTATCGTAATCAGGTTCCGTTTAACGCCACAGGCTCGGTAGTCGTAGAAATAAGAGACCACAGACTACGACAAGATGAATGTGCCCAAGCACGGTTTTCATTCCCGATTACATGTAACGTGAACCTGCACTACTATTCTTCCTCGTTCTTCTCCCTGAAAGACAAGTCACCATGGGAATTGGTCTATATGGTAGAGGACTCGAATGTCAATGAAGGAACAATGTTTGCCATGATAAAGGCCAAGTTGAAACTGTCATCAGCTAAACACTCGACGGACATTCGATTCAAACCGCCCAACATACACATATTGTCTAAGGGCTTTAACAGCTCATGCGTCGATTTTTGGACAGTTAATCGACCCAAGTTAGAACGCAGATTGTTGGACCAAGGACCCAATTCCTCAAATGCTAACGAGCCCATGCTTGGAAGAATAGAGTTGTTACCAGGAGAGACATGGGCCTCACGAAGTACAATAAGCGCCCCAATGCAAAAGTCCGCTTCTATGCGGATAACAAGGCCCATTAACCTAATGGGCAACGACATTTCAGAAGAGGCCCATTCCGACGCGGACCACCCATACAGGACTCTAAACAGGTTGCCCACAACCGCACTAGAGCCGGGAGACTCGGTTTCCCAAGTCCAGAGTGACAACGTCTCAAGGAAAGAGTTAGAGTCCATTATAGAAGCGACGATTAATAAGTGTTTAATTAAGGAACGACCACAGGCGTTAAAAGAGTTGTAA |
Protein Sequence | MLRSLMLIENFKCFHVGSLNFCEGICLSSQKLLSDLFCYLFHIWVLLNFRENRGAARPDFGMEDFSVVSNKYIESRRNEYALTNDATTIKLEFPTTLEQATVRLKGKCMKIDHIVIEYRNQVPFNATGSVVVEIRDHRLRQDECAQARFSFPITCNVNLHYYSSSFFSLKDKSPWELVYMVEDSNVNEGTMFAMIKAKLKLSSAKHSTDIRFKPPNIHILSKGFNSSCVDFWTVNRPKLERRLLDQGPNSSNANEPMLGRIELLPGETWASRSTISAPMQKSASMRITRPINLMGNDISEEAHSDADHPYRTLNRLPTTALEPGDSVSQVQSDNVSRKELESIIEATINKCLIKERPQALKEL |
1 |
Sandra N, et al. 3 Biotech. 2021 Aug;11(8):381. doi: 10.1007/s13205-021-02925-2. Epub 2021 Jul 25. PMID: 34458057 |
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2 |
Aboughanem-Sabanadzovic N, et al. Viruses. 2023 Oct 25;15(11):2145. doi: 10.3390/v15112145. PMID: 38005823 |
3 |
Two new 'legumoviruses' (genus Begomovirus) naturally infecting soybean in Nigeria. Alabi OJ, et al. Arch Virol. 2010 May;155(5):643-56. doi: 10.1007/s00705-010-0630-3. Epub 2010 Mar 13. PMID: 20229118 |
4 |
Leke WN, et al. Arch Virol. 2016 Aug;161(8):2347-50. doi: 10.1007/s00705-016-2915-7. Epub 2016 Jun 4. PMID: 27262944 |
5 |
Leke WN, et al. Arch Virol. 2016 Aug;161(8):2329-33. doi: 10.1007/s00705-016-2894-8. Epub 2016 May 25. PMID: 27224982 |