Soybean blistering mosaic virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823505.1
Isolate Argentina
Release date 2018/8/25
Submitter Rodriguez Pardina,P.E., Hanada,K., Zerbini,F.M., Ducasse,D.A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_038463
TTTAAAACGCTTTGGGGGTGGCATATTTGTAAATATAGGGCTGTACCCCGATTGCTCTGCCTTCAGAAGTCTATATGAATTGGGGTAAAGGGGTACAATATATAGTAGGAGTTCTTAAAGGCTCAAAGGGGCACGTGGCGGCCATCCGTATAATATTACCGGATGGCCGCGCGATTTTTTTAGTCCGGGCCCGCTCCCGCAAATTGCGCTATATTATCTTTTTAATTGGCCCTACCATTATTGACGAATCACATTCTGTCCTTGATGCTAAGATATTTTGAAAAACGTGGGCACTAAGTTGCTAAAGTTGTATAAATGGGCCAAGTATTACGTGGCTCGAGATACTTTAATTCAAAATGCCTAAGCGCGATGCCCCATGGCGTTTAATGGCGGGGACCTCAAAGGTTAGTCGTACCACCAATTATTCGCCTCGAGGAGGTATGCCCAAGCGTGATGCTTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTATCGCATCTGGAGAGGTCCAGATGTTCCTAGAGGGTGTGAAGGTCCTTGTAAGGTCCAGTCGTACGAGCAGCGTCATGACATCTCTCACGTTGGCAAAGTCATGTGCGTTTCTGACGTGACACGTGGTAACGGTATTACCCACCGCGTTGGTAAGCGTTTTTGTGTTAAGTCCGTGTACATTTTGGGGAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACCAACAGCGTCATGTTCTGGTTGGTGCGAGATCGTAGACCGTATGGGACACCTATGGATTTTGGCCAGGTGTTCAACATGTTTGACAATGAGCCTAGCACTGCTACCGTGAAGAACGATCTTCGGGACCGTTACCAAGTAATGCATAAGTTTTATGCAAAGGTTACGGGTGGACAATACGCTAGCAATGAGCAGGCTCTCGTGAAGCGTTTCTGGAAGGTGAACAATTACGTGGTGTACAACCATCAAGAAGCTGGGAAATATGAGAATCATACTGAGAACGCCCTATTATTGTATATGGCATGTACTCATGCTTCTAATCCCGTGTACGCGACATTGAAAATTCGGATCTATTTTTACGATTCGATCAGTAATTAATAAAGTTTGAATTTTATTGAATGATTCTCAAGTACATGATTTACATACGATCTGTCTGTCGCGGAGCGAACAGCTCTAATTACATTGTTAATGGAAATAACACCTAATTGATCTAGATATAATAAAACTAAATGTCTAAATCTATTTAAATATGTCGTCCCAGAAGCTGTTAGTGATGTCGTCCAGACTTGGAAATTCAGAAATGCCTTGTGGAGATCCAACGCTTTCCTCGCGTTGTGGTTGAACCGTATCTGGAGGTGGTATATCCTGGTGTTGGTGTATAGTGGATCCTCCACGTTGGTTATCTTGAAATAAAGGGGATTTGATATCTCCCAGATAAAGACGCCATTCTCTGCTTGAGGCGCAGTGATGAGTTCCCCGGTGCGTGAATCCATTGTTTCTGCAGTCGATGTGAATGTAGATGGAGCAGCCGCAATTTAGGTCTATGCGTCTGCGTCTAACTGCTCTGCGTTTGGCTGCTCTGTGCCGTGTCTTGATAGAGGGGGGAGTTGAGGAAGATGAATTTAGCATTATGAAGTGTCCAAGCTCTTAGAGATGCATTTTCCTCTTTGTCTAGGAAGTCTTTATAGCTAGCCCCCTCTCCTGGATTGCACAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCATATTTGCAGTTGGACTGCCAATCTCTTTGGGCCCCAATTAACTCTTTCCAGTGCTTTAACTTTAGGTAATGCGGAGTGACATCATCAATGACGTTATACTCAACATTATTTGAATAAACCTTTGAATTAAAGTCGAGATGTCCACTTAAATAATTATGTGGGCCCAATGCACGAGCCCACATCGTCTTCCCCGTTCGACTATCGCCTTCGATGATAATACTTATAGGTCTCTCTGGCCGCGCAGCGGAATCCTTTCCAAAATAATCATCAGCCCAATTTTGCATCTCGTCAGGCACGTTAGTGAAAGATGAGAGTCGAAACGGAGGAACCCACGGTTCTGGAGGCTTACTAAAAATCCTATCTAAATTGGAATTTAAATTATGATATTGAAATAAATATTTTTCAGGGAGCTTTTCCCTGATTATTTGGATAGCGGCTTCTTTAGAATGGGCGTTTAATGCCTCTGCGGCGGCGTCGTTAGCCGTCTGCTGACCTCCTCTAGCACTTCTACCGTCGATCTGGAATTCTCCCCATTCGAGAGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGACGATGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGATCTTGTTGGGGATACCAAGTCGAAGAATCTGTTATTCGTGCATTGGTATTTGCCTTCGAATTGTATAAGCACATGGAGATGAGGCTCCCCATCCTCGTGAAGTTCTCTACAGATCTTGATGAATTTCTTGTTGGTTGGTGTCCTGTAGGGTTTGTAATTGGGAAAGTGCGTCTTCTTTGGAGAGAGAACATCTAGGATATGTGATAAAATAGTTTTTGGAAGCATT

Gene Information

NCBI Accession YP_009506489.1
Location 357-1100
Gene Name CP
Protein Name capsid protein
Coding Region ATGCCTAAGCGCGATGCCCCATGGCGTTTAATGGCGGGGACCTCAAAGGTTAGTCGTACCACCAATTATTCGCCTCGAGGAGGTATGCCCAAGCGTGATGCTTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTATCGCATCTGGAGAGGTCCAGATGTTCCTAGAGGGTGTGAAGGTCCTTGTAAGGTCCAGTCGTACGAGCAGCGTCATGACATCTCTCACGTTGGCAAAGTCATGTGCGTTTCTGACGTGACACGTGGTAACGGTATTACCCACCGCGTTGGTAAGCGTTTTTGTGTTAAGTCCGTGTACATTTTGGGGAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACCAACAGCGTCATGTTCTGGTTGGTGCGAGATCGTAGACCGTATGGGACACCTATGGATTTTGGCCAGGTGTTCAACATGTTTGACAATGAGCCTAGCACTGCTACCGTGAAGAACGATCTTCGGGACCGTTACCAAGTAATGCATAAGTTTTATGCAAAGGTTACGGGTGGACAATACGCTAGCAATGAGCAGGCTCTCGTGAAGCGTTTCTGGAAGGTGAACAATTACGTGGTGTACAACCATCAAGAAGCTGGGAAATATGAGAATCATACTGAGAACGCCCTATTATTGTATATGGCATGTACTCATGCTTCTAATCCCGTGTACGCGACATTGAAAATTCGGATCTATTTTTACGATTCGATCAGTAATTAA
Protein Sequence MPKRDAPWRLMAGTSKVSRTTNYSPRGGMPKRDAWVNRPMYRKPRIYRIWRGPDVPRGCEGPCKVQSYEQRHDISHVGKVMCVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSISN

NCBI Accession YP_009506490.1
Location 399-995
Gene Name AC5
Protein Name AC5
Coding Region ATGATTCTCATATTTCCCAGCTTCTTGATGGTTGTACACCACGTAATTGTTCACCTTCCAGAAACGCTTCACGAGAGCCTGCTCATTGCTAGCGTATTGTCCACCCGTAACCTTTGCATAAAACTTATGCATTACTTGGTAACGGTCCCGAAGATCGTTCTTCACGGTAGCAGTGCTAGGCTCATTGTCAAACATGTTGAACACCTGGCCAAAATCCATAGGTGTCCCATACGGTCTACGATCTCGCACCAACCAGAACATGACGCTGTTGGTGTGGTTCTTCAACTTGATATTCTCGTCCATCCATATCTTCCCCAAAATGTACACGGACTTAACACAAAAACGCTTACCAACGCGGTGGGTAATACCGTTACCACGTGTCACGTCAGAAACGCACATGACTTTGCCAACGTGAGAGATGTCATGACGCTGCTCGTACGACTGGACCTTACAAGGACCTTCACACCCTCTAGGAACATCTGGACCTCTCCAGATGCGATAGATCCTGGGCTTCCTGTACATGGGCCTGTTAACCCAAGCATCACGCTTGGGCATACCTCCTCGAGGCGAATAATTGGTGGTACGACTAACCTTTGA
Protein Sequence MILIFPSFLMVVHHVIVHLPETLHESLLIASVLSTRNLCIKLMHYLVTVPKIVLHGSSARLIVKHVEHLAKIHRCPIRSTISHQPEHDAVGVVLQLDILVHPYLPQNVHGLNTKTLTNAVGNTVTTCHVRNAHDFANVRDVMTLLVRLDLTRTFTPSRNIWTSPDAIDPGLPVHGPVNPSITLGHTSSRRIIGGTTNL

NCBI Accession YP_009506491.1
Location 1097-1495
Gene Name REn
Protein Name replication enhancer
Coding Region ATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAAGCAGAGAATGGCGTCTTTATCTGGGAGATATCAAATCCCCTTTATTTCAAGATAACCAACGTGGAGGATCCACTATACACCAACACCAGGATATACCACCTCCAGATACGGTTCAACCACAACGCGAGGAAAGCGTTGGATCTCCACAAGGCATTTCTGAATTTCCAAGTCTGGACGACATCACTAACAGCTTCTGGGACGACATATTTAAATAGATTTAGACATTTAGTTTTATTATATCTAGATCAATTAGGTGTTATTTCCATTAACAATGTAATTAGAGCTGTTCGCTCCGCGACAGACAGATCGTATGTAAATCATGTACTTGAGAATCATTCAATAAAATTCAAACTTTATTAA
Protein Sequence MDSRTGELITAPQAENGVFIWEISNPLYFKITNVEDPLYTNTRIYHLQIRFNHNARKALDLHKAFLNFQVWTTSLTASGTTYLNRFRHLVLLYLDQLGVISINNVIRAVRSATDRSYVNHVLENHSIKFKLY

NCBI Accession YP_009506492.1
Location 1242-1631
Gene Name TrAP
Protein Name tanscriptional activator protein
Coding Region ATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAGACACGGCACAGAGCAGCCAAACGCAGAGCAGTTAGACGCAGACGCATAGACCTAAATTGCGGCTGCTCCATCTACATTCACATCGACTGCAGAAACAATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAAGCAGAGAATGGCGTCTTTATCTGGGAGATATCAAATCCCCTTTATTTCAAGATAACCAACGTGGAGGATCCACTATACACCAACACCAGGATATACCACCTCCAGATACGGTTCAACCACAACGCGAGGAAAGCGTTGGATCTCCACAAGGCATTTCTGAATTTCCAAGTCTGGACGACATCACTAACAGCTTCTGGGACGACATATTTAAATAG
Protein Sequence MLNSSSSTPPSIKTRHRAAKRRAVRRRRIDLNCGCSIYIHIDCRNNGFTHRGTHHCASSREWRLYLGDIKSPLFQDNQRGGSTIHQHQDIPPPDTVQPQREESVGSPQGISEFPSLDDITNSFWDDIFK

NCBI Accession YP_009506493.1
Location 1558-2604
Gene Name Rep
Protein Name replication asociated protein
Coding Region ATGCTTCCAAAAACTATTTTATCACATATCCTAGATGTTCTCTCTCCAAAGAAGACGCACTTTCCCAATTACAAACCCTACAGGACACCAACCAACAAGAAATTCATCAAGATCTGTAGAGAACTTCACGAGGATGGGGAGCCTCATCTCCATGTGCTTATACAATTCGAAGGCAAATACCAATGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACAAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACTCTCGAATGGGGAGAATTCCAGATCGACGGTAGAAGTGCTAGAGGAGGTCAGCAGACGGCTAACGACGCCGCCGCAGAGGCATTAAACGCCCATTCTAAAGAAGCCGCTATCCAAATAATCAGGGAAAAGCTCCCTGAAAAATATTTATTTCAATATCATAATTTAAATTCCAATTTAGATAGGATTTTTAGTAAGCCTCCAGAACCGTGGGTTCCTCCGTTTCGACTCTCATCTTTCACTAACGTGCCTGACGAGATGCAAAATTGGGCTGATGATTATTTTGGAAAGGATTCCGCTGCGCGGCCAGAGAGACCTATAAGTATTATCATCGAAGGCGATAGTCGAACGGGGAAGACGATGTGGGCTCGTGCATTGGGCCCACATAATTATTTAAGTGGACATCTCGACTTTAATTCAAAGGTTTATTCAAATAATGTTGAGTATAACGTCATTGATGATGTCACTCCGCATTACCTAAAGTTAAAGCACTGGAAAGAGTTAATTGGGGCCCAAAGAGATTGGCAGTCCAACTGCAAATATGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTGTGCAATCCAGGAGAGGGGGCTAGCTATAAAGACTTCCTAGACAAAGAGGAAAATGCATCTCTAAGAGCTTGGACACTTCATAATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAGACACGGCACAGAGCAGCCAAACGCAGAGCAGTTAG
Protein Sequence MLPKTILSHILDVLSPKKTHFPNYKPYRTPTNKKFIKICRELHEDGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAHSKEAAIQIIREKLPEKYLFQYHNLNSNLDRIFSKPPEPWVPPFRLSSFTNVPDEMQNWADDYFGKDSAARPERPISIIIEGDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNNVEYNVIDDVTPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENASLRAWTLHNAKFIFLNSPLYQDTAQSSQTQSS

NCBI Accession YP_009506494.1
Location 2214-2570
Gene Name AC4
Protein Name AC4
Coding Region ATGTTCTCTCTCCAAAGAAGACGCACTTTCCCAATTACAAACCCTACAGGACACCAACCAACAAGAAATTCATCAAGATCTGTAGAGAACTTCACGAGGATGGGGAGCCTCATCTCCATGTGCTTATACAATTCGAAGGCAAATACCAATGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACAAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACTCTCGAATGGGGAGAATTCCAGATCGACGGTAGAAGTGCTAGAGGAGGTCAGCAGACGGCTAACGACGCCGCCGCAGAGGCATTAA
Protein Sequence MFSLQRRRTFPITNPTGHQPTRNSSRSVENFTRMGSLISMCLYNSKANTNARITDSSTWYPQQDQHISIRTFRELNHRPTSSPTSTRTEILSNGENSRSTVEVLEEVSRRLTTPPQRH

References More References in PubMed

1

Soybean chlorotic spot virus, a novel begomovirus infecting soybean in Brazil.

Coco D, et al.  Arch Virol. 2013 Feb;158(2):457-62. doi: 10.1007/s00705-012-1499-0. Epub 2012 Oct 10.

PMID: 23053525
2

Molecular variability of cowpea mild mottle virus infecting soybean in Brazil.

Zanardo LG, et al.  Arch Virol. 2014 Apr;159(4):727-37. doi: 10.1007/s00705-013-1879-0. Epub 2013 Oct 19.

PMID: 24142270
3

Reconstruction and Characterization of Full-Length Begomovirus and Alphasatellite Genomes Infecting Pepper through Metagenomics.

Bornancini VA, et al.  Viruses. 2020 Feb 11;12(2):202. doi: 10.3390/v12020202.

PMID: 32054104
4

Tomato mottle wrinkle virus, a recombinant begomovirus infecting tomato in Argentina.

Vaghi Medina CG, et al.  Arch Virol. 2015 Feb;160(2):581-5. doi: 10.1007/s00705-014-2216-y. Epub 2014 Sep 25.

PMID: 25252814
5

Influence of Climatic Variables on Incidence of Whitefly-Transmitted Begomovirus in Soybean and Bean Crops in North-Western Argentina.

Reyna P, et al.  Viruses. 2023 Feb 7;15(2):462. doi: 10.3390/v15020462.

PMID: 36851675
6

Characterization of tomato yellow vein streak virus, a begomovirus from Brazil.

Albuquerque LC, et al.  Virus Genes. 2010 Feb;40(1):140-7. doi: 10.1007/s11262-009-0426-2. Epub 2009 Nov 24.

PMID: 19937269
7

The Bean pod mottle virus proteinase cofactor and putative helicase are symptom severity determinants.

Gu H, et al.  Virology. 2005 Mar 15;333(2):271-83. doi: 10.1016/j.virol.2005.01.020.

PMID: 15721361