Soybean blistering mosaic virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_002823505.1 |
| Isolate |
Argentina |
| Release date |
2018/8/25 |
| Submitter |
Rodriguez Pardina,P.E., Hanada,K., Zerbini,F.M., Ducasse,D.A. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TTTAAAACGCTTTGGGGGTGGCATATTTGTAAATATAGGGCTGTACCCCGATTGCTCTGCCTTCAGAAGTCTATATGAATTGGGGTAAAGGGGTACAATATATAGTAGGAGTTCTTAAAGGCTCAAAGGGGCACGTGGCGGCCATCCGTATAATATTACCGGATGGCCGCGCGATTTTTTTAGTCCGGGCCCGCTCCCGCAAATTGCGCTATATTATCTTTTTAATTGGCCCTACCATTATTGACGAATCACATTCTGTCCTTGATGCTAAGATATTTTGAAAAACGTGGGCACTAAGTTGCTAAAGTTGTATAAATGGGCCAAGTATTACGTGGCTCGAGATACTTTAATTCAAAATGCCTAAGCGCGATGCCCCATGGCGTTTAATGGCGGGGACCTCAAAGGTTAGTCGTACCACCAATTATTCGCCTCGAGGAGGTATGCCCAAGCGTGATGCTTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTATCGCATCTGGAGAGGTCCAGATGTTCCTAGAGGGTGTGAAGGTCCTTGTAAGGTCCAGTCGTACGAGCAGCGTCATGACATCTCTCACGTTGGCAAAGTCATGTGCGTTTCTGACGTGACACGTGGTAACGGTATTACCCACCGCGTTGGTAAGCGTTTTTGTGTTAAGTCCGTGTACATTTTGGGGAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACCAACAGCGTCATGTTCTGGTTGGTGCGAGATCGTAGACCGTATGGGACACCTATGGATTTTGGCCAGGTGTTCAACATGTTTGACAATGAGCCTAGCACTGCTACCGTGAAGAACGATCTTCGGGACCGTTACCAAGTAATGCATAAGTTTTATGCAAAGGTTACGGGTGGACAATACGCTAGCAATGAGCAGGCTCTCGTGAAGCGTTTCTGGAAGGTGAACAATTACGTGGTGTACAACCATCAAGAAGCTGGGAAATATGAGAATCATACTGAGAACGCCCTATTATTGTATATGGCATGTACTCATGCTTCTAATCCCGTGTACGCGACATTGAAAATTCGGATCTATTTTTACGATTCGATCAGTAATTAATAAAGTTTGAATTTTATTGAATGATTCTCAAGTACATGATTTACATACGATCTGTCTGTCGCGGAGCGAACAGCTCTAATTACATTGTTAATGGAAATAACACCTAATTGATCTAGATATAATAAAACTAAATGTCTAAATCTATTTAAATATGTCGTCCCAGAAGCTGTTAGTGATGTCGTCCAGACTTGGAAATTCAGAAATGCCTTGTGGAGATCCAACGCTTTCCTCGCGTTGTGGTTGAACCGTATCTGGAGGTGGTATATCCTGGTGTTGGTGTATAGTGGATCCTCCACGTTGGTTATCTTGAAATAAAGGGGATTTGATATCTCCCAGATAAAGACGCCATTCTCTGCTTGAGGCGCAGTGATGAGTTCCCCGGTGCGTGAATCCATTGTTTCTGCAGTCGATGTGAATGTAGATGGAGCAGCCGCAATTTAGGTCTATGCGTCTGCGTCTAACTGCTCTGCGTTTGGCTGCTCTGTGCCGTGTCTTGATAGAGGGGGGAGTTGAGGAAGATGAATTTAGCATTATGAAGTGTCCAAGCTCTTAGAGATGCATTTTCCTCTTTGTCTAGGAAGTCTTTATAGCTAGCCCCCTCTCCTGGATTGCACAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCATATTTGCAGTTGGACTGCCAATCTCTTTGGGCCCCAATTAACTCTTTCCAGTGCTTTAACTTTAGGTAATGCGGAGTGACATCATCAATGACGTTATACTCAACATTATTTGAATAAACCTTTGAATTAAAGTCGAGATGTCCACTTAAATAATTATGTGGGCCCAATGCACGAGCCCACATCGTCTTCCCCGTTCGACTATCGCCTTCGATGATAATACTTATAGGTCTCTCTGGCCGCGCAGCGGAATCCTTTCCAAAATAATCATCAGCCCAATTTTGCATCTCGTCAGGCACGTTAGTGAAAGATGAGAGTCGAAACGGAGGAACCCACGGTTCTGGAGGCTTACTAAAAATCCTATCTAAATTGGAATTTAAATTATGATATTGAAATAAATATTTTTCAGGGAGCTTTTCCCTGATTATTTGGATAGCGGCTTCTTTAGAATGGGCGTTTAATGCCTCTGCGGCGGCGTCGTTAGCCGTCTGCTGACCTCCTCTAGCACTTCTACCGTCGATCTGGAATTCTCCCCATTCGAGAGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGACGATGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGATCTTGTTGGGGATACCAAGTCGAAGAATCTGTTATTCGTGCATTGGTATTTGCCTTCGAATTGTATAAGCACATGGAGATGAGGCTCCCCATCCTCGTGAAGTTCTCTACAGATCTTGATGAATTTCTTGTTGGTTGGTGTCCTGTAGGGTTTGTAATTGGGAAAGTGCGTCTTCTTTGGAGAGAGAACATCTAGGATATGTGATAAAATAGTTTTTGGAAGCATT
Gene Information
|
NCBI Accession
|
YP_009506489.1
|
|
Location
|
357-1100 |
|
Gene Name
|
CP |
|
Protein Name
|
capsid protein |
|
Coding Region
|
ATGCCTAAGCGCGATGCCCCATGGCGTTTAATGGCGGGGACCTCAAAGGTTAGTCGTACCACCAATTATTCGCCTCGAGGAGGTATGCCCAAGCGTGATGCTTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTATCGCATCTGGAGAGGTCCAGATGTTCCTAGAGGGTGTGAAGGTCCTTGTAAGGTCCAGTCGTACGAGCAGCGTCATGACATCTCTCACGTTGGCAAAGTCATGTGCGTTTCTGACGTGACACGTGGTAACGGTATTACCCACCGCGTTGGTAAGCGTTTTTGTGTTAAGTCCGTGTACATTTTGGGGAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACCAACAGCGTCATGTTCTGGTTGGTGCGAGATCGTAGACCGTATGGGACACCTATGGATTTTGGCCAGGTGTTCAACATGTTTGACAATGAGCCTAGCACTGCTACCGTGAAGAACGATCTTCGGGACCGTTACCAAGTAATGCATAAGTTTTATGCAAAGGTTACGGGTGGACAATACGCTAGCAATGAGCAGGCTCTCGTGAAGCGTTTCTGGAAGGTGAACAATTACGTGGTGTACAACCATCAAGAAGCTGGGAAATATGAGAATCATACTGAGAACGCCCTATTATTGTATATGGCATGTACTCATGCTTCTAATCCCGTGTACGCGACATTGAAAATTCGGATCTATTTTTACGATTCGATCAGTAATTAA |
|
Protein Sequence
|
MPKRDAPWRLMAGTSKVSRTTNYSPRGGMPKRDAWVNRPMYRKPRIYRIWRGPDVPRGCEGPCKVQSYEQRHDISHVGKVMCVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSISN |
|
NCBI Accession
|
YP_009506490.1
|
|
Location
|
399-995 |
|
Gene Name
|
AC5 |
|
Protein Name
|
AC5 |
|
Coding Region
|
ATGATTCTCATATTTCCCAGCTTCTTGATGGTTGTACACCACGTAATTGTTCACCTTCCAGAAACGCTTCACGAGAGCCTGCTCATTGCTAGCGTATTGTCCACCCGTAACCTTTGCATAAAACTTATGCATTACTTGGTAACGGTCCCGAAGATCGTTCTTCACGGTAGCAGTGCTAGGCTCATTGTCAAACATGTTGAACACCTGGCCAAAATCCATAGGTGTCCCATACGGTCTACGATCTCGCACCAACCAGAACATGACGCTGTTGGTGTGGTTCTTCAACTTGATATTCTCGTCCATCCATATCTTCCCCAAAATGTACACGGACTTAACACAAAAACGCTTACCAACGCGGTGGGTAATACCGTTACCACGTGTCACGTCAGAAACGCACATGACTTTGCCAACGTGAGAGATGTCATGACGCTGCTCGTACGACTGGACCTTACAAGGACCTTCACACCCTCTAGGAACATCTGGACCTCTCCAGATGCGATAGATCCTGGGCTTCCTGTACATGGGCCTGTTAACCCAAGCATCACGCTTGGGCATACCTCCTCGAGGCGAATAATTGGTGGTACGACTAACCTTTGA |
|
Protein Sequence
|
MILIFPSFLMVVHHVIVHLPETLHESLLIASVLSTRNLCIKLMHYLVTVPKIVLHGSSARLIVKHVEHLAKIHRCPIRSTISHQPEHDAVGVVLQLDILVHPYLPQNVHGLNTKTLTNAVGNTVTTCHVRNAHDFANVRDVMTLLVRLDLTRTFTPSRNIWTSPDAIDPGLPVHGPVNPSITLGHTSSRRIIGGTTNL |
|
NCBI Accession
|
YP_009506491.1
|
|
Location
|
1097-1495 |
|
Gene Name
|
REn |
|
Protein Name
|
replication enhancer |
|
Coding Region
|
ATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAAGCAGAGAATGGCGTCTTTATCTGGGAGATATCAAATCCCCTTTATTTCAAGATAACCAACGTGGAGGATCCACTATACACCAACACCAGGATATACCACCTCCAGATACGGTTCAACCACAACGCGAGGAAAGCGTTGGATCTCCACAAGGCATTTCTGAATTTCCAAGTCTGGACGACATCACTAACAGCTTCTGGGACGACATATTTAAATAGATTTAGACATTTAGTTTTATTATATCTAGATCAATTAGGTGTTATTTCCATTAACAATGTAATTAGAGCTGTTCGCTCCGCGACAGACAGATCGTATGTAAATCATGTACTTGAGAATCATTCAATAAAATTCAAACTTTATTAA |
|
Protein Sequence
|
MDSRTGELITAPQAENGVFIWEISNPLYFKITNVEDPLYTNTRIYHLQIRFNHNARKALDLHKAFLNFQVWTTSLTASGTTYLNRFRHLVLLYLDQLGVISINNVIRAVRSATDRSYVNHVLENHSIKFKLY |
|
NCBI Accession
|
YP_009506492.1
|
|
Location
|
1242-1631 |
|
Gene Name
|
TrAP |
|
Protein Name
|
tanscriptional activator protein |
|
Coding Region
|
ATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAGACACGGCACAGAGCAGCCAAACGCAGAGCAGTTAGACGCAGACGCATAGACCTAAATTGCGGCTGCTCCATCTACATTCACATCGACTGCAGAAACAATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAAGCAGAGAATGGCGTCTTTATCTGGGAGATATCAAATCCCCTTTATTTCAAGATAACCAACGTGGAGGATCCACTATACACCAACACCAGGATATACCACCTCCAGATACGGTTCAACCACAACGCGAGGAAAGCGTTGGATCTCCACAAGGCATTTCTGAATTTCCAAGTCTGGACGACATCACTAACAGCTTCTGGGACGACATATTTAAATAG |
|
Protein Sequence
|
MLNSSSSTPPSIKTRHRAAKRRAVRRRRIDLNCGCSIYIHIDCRNNGFTHRGTHHCASSREWRLYLGDIKSPLFQDNQRGGSTIHQHQDIPPPDTVQPQREESVGSPQGISEFPSLDDITNSFWDDIFK |
|
NCBI Accession
|
YP_009506493.1
|
|
Location
|
1558-2604 |
|
Gene Name
|
Rep |
|
Protein Name
|
replication asociated protein |
|
Coding Region
|
ATGCTTCCAAAAACTATTTTATCACATATCCTAGATGTTCTCTCTCCAAAGAAGACGCACTTTCCCAATTACAAACCCTACAGGACACCAACCAACAAGAAATTCATCAAGATCTGTAGAGAACTTCACGAGGATGGGGAGCCTCATCTCCATGTGCTTATACAATTCGAAGGCAAATACCAATGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACAAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACTCTCGAATGGGGAGAATTCCAGATCGACGGTAGAAGTGCTAGAGGAGGTCAGCAGACGGCTAACGACGCCGCCGCAGAGGCATTAAACGCCCATTCTAAAGAAGCCGCTATCCAAATAATCAGGGAAAAGCTCCCTGAAAAATATTTATTTCAATATCATAATTTAAATTCCAATTTAGATAGGATTTTTAGTAAGCCTCCAGAACCGTGGGTTCCTCCGTTTCGACTCTCATCTTTCACTAACGTGCCTGACGAGATGCAAAATTGGGCTGATGATTATTTTGGAAAGGATTCCGCTGCGCGGCCAGAGAGACCTATAAGTATTATCATCGAAGGCGATAGTCGAACGGGGAAGACGATGTGGGCTCGTGCATTGGGCCCACATAATTATTTAAGTGGACATCTCGACTTTAATTCAAAGGTTTATTCAAATAATGTTGAGTATAACGTCATTGATGATGTCACTCCGCATTACCTAAAGTTAAAGCACTGGAAAGAGTTAATTGGGGCCCAAAGAGATTGGCAGTCCAACTGCAAATATGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTGTGCAATCCAGGAGAGGGGGCTAGCTATAAAGACTTCCTAGACAAAGAGGAAAATGCATCTCTAAGAGCTTGGACACTTCATAATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAGACACGGCACAGAGCAGCCAAACGCAGAGCAGTTAG |
|
Protein Sequence
|
MLPKTILSHILDVLSPKKTHFPNYKPYRTPTNKKFIKICRELHEDGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAHSKEAAIQIIREKLPEKYLFQYHNLNSNLDRIFSKPPEPWVPPFRLSSFTNVPDEMQNWADDYFGKDSAARPERPISIIIEGDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNNVEYNVIDDVTPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENASLRAWTLHNAKFIFLNSPLYQDTAQSSQTQSS |
|
NCBI Accession
|
YP_009506494.1
|
|
Location
|
2214-2570 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 |
|
Coding Region
|
ATGTTCTCTCTCCAAAGAAGACGCACTTTCCCAATTACAAACCCTACAGGACACCAACCAACAAGAAATTCATCAAGATCTGTAGAGAACTTCACGAGGATGGGGAGCCTCATCTCCATGTGCTTATACAATTCGAAGGCAAATACCAATGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACAAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACTCTCGAATGGGGAGAATTCCAGATCGACGGTAGAAGTGCTAGAGGAGGTCAGCAGACGGCTAACGACGCCGCCGCAGAGGCATTAA |
|
Protein Sequence
|
MFSLQRRRTFPITNPTGHQPTRNSSRSVENFTRMGSLISMCLYNSKANTNARITDSSTWYPQQDQHISIRTFRELNHRPTSSPTSTRTEILSNGENSRSTVEVLEEVSRRLTTPPQRH |