Sidastrum golden leaf spot virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823485.1
Isolate Brazil
Release date 2018/8/25
Submitter Fonseca,M.E.N., Boiteux,L.S., Fernandes,N.A.N., Costa,A.F.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_038462
ACCGGATGGCCGCGCGATTTTTCCCCCCCTCGCGTGGCGCATTGCTGACCGCTCGATCTAGGCGCGATTGTTTAGGCCCATGCGCTTAGGCCCAGTCCATTTGAATTAAAGATGAAATCTTTAATAAAGACCAATCAAAATGCGTCTGGGAAGCCTAGATATTTGTTCCAATACTTCGGCCCTAAGTTTTATGACGTTATAAAAGTAAAGCAAGCATGACGTCATGATATACTTGAAAATGCCGAAGCGGGATCCCTCATGGCGCTCGATGGCGGGAACCTCAAAGGTAAGCCGCTCCTCCAATTTCTCCCCCCGTGGAGGCCCAAAGGTCAATAAGGCCTCTGAATGGGTTAACAGGCCAATGTACAGGAAGCCCAGGATATACAGGACGCTAAGAACTCCTGATGTTCCTAGAGGCTGTGAAGGGCCATGTAAGGTCCAGTCGTACGAGCAGCGTAACGATATCTCACATGCTGGAAAGGTGATCTGTATCTCCGACGTCACTCGCGGTAGCGGTATCACCCATCGTGTCGGTAAGCGGTTTTGTGTTAAGTCTGTGTATATTTTAGGTAAGATCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGTGTTATGTTCTGGCTGGTCCGGGATCGGAGACCCAACGGCACATCCCCATGGACTTTGGTCATCTGTTCAACATGTTCGACAATGAGCCTAGTACTGCAACTGTTAAGAATGATCTCCGAGATCGTTATCAGGTTCAACACAGATTCTATGCCAAGGTCACTGGTGGTCAATATGCCAGCAATGAGCAGGCCCTGGTCAGGCGGTTTTGGAAGGTCAATACTCATGTCGTGTATAACAACCAGGAAGCTGCTAGATACGAGAACCATACGGAGAATGCCTAGTGTTGTACATGGGCATGTACTCATGCCTCTAATCCCGTGTATGCAACTCTTCAAGATCCGGATCTATTTTTACGATTCGATCTCAATTTAATAAATTTTGAATTTTATTGAATGATCTTCCGAGTACATCAGAGACATACGATCTGTCCTGTTGCGAAATCGAACTGCTTCGGATGACATTATAAAGCGCAGAATACACCTCATTGTTGTAAGTACAGCATGACTTACATGCCTCGACCAACTTGAATAAGTCGTCCCAGAAGCTCTCATCGATGTCGTCCAGACTTGGAAGTTCAGGAATGCCTTGTGGAGACCCAACGCTCTCCTGAGGTTGTGGTTGAACCGGATCTGGATGTGATACACTCTGGTCCCTGTGAACAGGATGTCTTCTACTCGGTGCATCTTGAAATACAGGGGATTTGTTATCTCCCAGATATATACGCCATTCTCTGCCTGATGTGCAGTGATGAGTTCCCCGGATGCGTGCATCCATGACCTATGCAGTTGATGTGGACGTATATGGAGCAGCCGCACTCGATGTGAATCCGTCGCCGTCTGAGTTGCTCTCTTTTTCGCAATCCTGTGTTGATGTTTGATAGAGGGGGGAGTCGAGAAAGATGAATTTAGCATTATGGAGGGTCCACGATTTCAAGCGCAGCATTTTCCTCTTTGTCAAGGAAATCTTTATAGCTGGCCCCCTCGCCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAATAAATTCTTTCCAGTGCTTAATCTTAAGATATTGCGGTGTGACATCATCGATGACGTTATATTCCGCTTTGTCTGAGTAAACCCTAGAATTGAAGTCCAGGTGTCCGCTAAAATAATTATGTGGGCCAAACGCACGAGCCCACATTGTCTTCCCCGTCCGACTATCACCCTTCGACGATGATACTCATCGGTCTTTCCAGGCCGCGCAGCGGCACCCCTCCCAAAATAATCATCTGCCCACTCTTGCATCTCGTCCGGAACTCTAGTGAACGAGGAGAGTTGAAACGGAGGAGTCCATGGTTCCGGAGCCTTTTGAAACAGTCGTTCGATGTTAGCCTTTATGTTATGGTAGCTTGACAATGTACGCCTCCGGATCTCCGGCTTTGATGATTTCAAGAGCGTCTCCTCGTACAATGCTGCGTTCAACGGCGCTGTGGTAGCATCGTCGTCTGTCTGTTGCCCTCCTTCTAGCAGATCTTCCGTCGATCTGAAAACTACCCCATTCGCAGTAATCTCCGTCCTTCTCGATATATGTCTTGGCGTCTGAGGAGGACTTGCATGATTCGTATTTTCCATGACATACATTGGAATTGCAGGGATGTTTAAGATCGAAGAATCTGCAATTCGTACATGTGAACTTCCCTTCGAACTGAAGCAGGACGTGTAGATGAGGTTCCCCATTTTCATGGAGCTCTCTACATACTCTGATATATTTTTTATTAACTGGGGTTTCGAGGGCAAATAATTGGGAAAGTGCTTCTTCCTTTGAAATAGAGCACTTGGCATAAGTGAGGAAATAATTTCTGGATTGTATTTTAAAACGTTTTGCTGGTGGCATTTTTGTAAATAAGGGAGTGTCTCCAATTGAGCTCCTCTCAAACTTGCGATATGTATTGGAGACTACAGACAATATATAGTAGAGAAGTTCTCTAGGACCTCGAGACAAGTGGCGGCCCATCCGTTTAATATT

Gene Information

NCBI Accession YP_009506486.1
Location 224-991
Gene Name AV1
Protein Name coat protein
Coding Region ATGATATACTTGAAAATGCCGAAGCGGGATCCCTCATGGCGCTCGATGGCGGGAACCTCAAAGGTAAGCCGCTCCTCCAATTTCTCCCCCCGTGGAGGCCCAAAGGTCAATAAGGCCTCTGAATGGGTTAACAGGCCAATGTACAGGAAGCCCAGGATATACAGGACGCTAAGAACTCCTGATGTTCCTAGAGGCTGTGAAGGGCCATGTAAGGTCCAGTCGTACGAGCAGCGTAACGATATCTCACATGCTGGAAAGGTGATCTGTATCTCCGACGTCACTCGCGGTAGCGGTATCACCCATCGTGTCGGTAAGCGGTTTTGTGTTAAGTCTGTGTATATTTTAGGTAAGATCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGTGTTATGTTCTGGCTGGTCCGGGATCGGAGACCCAACGGCACATCCCCATGGACTTTGGTCATCTGTTCAACATGTTCGACAATGAGCCTAGTACTGCAACTGTTAAGAATGATCTCCGAGATCGTTATCAGGTTCAACACAGATTCTATGCCAAGGTCACTGGTGGTCAATATGCCAGCAATGAGCAGGCCCTGGTCAGGCGGTTTTGGAAGGTCAATACTCATGTCGTGTATAACAACCAGGAAGCTGCTAGATACGAGAACCATACGGAGAATGCCTAGTGTTGTACATGGGCATGTACTCATGCCTCTAATCCCGTGTATGCAACTCTTCAAGATCCGGATCTATTTTTACGATTCGATCTCAATTTAA
Protein Sequence MIYLKMPKRDPSWRSMAGTSKVSRSSNFSPRGGPKVNKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRNDISHAGKVICISDVTRGSGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPNGTSPWTLVICSTCSTMSLVLQLLRMISEIVIRFNTDSMPRSLVVNMPAMSRPWSGGFGRSILMSCITTRKLLDTRTIRRMPSVVHGHVLMPLIPCMQLFKIRIYFYDSISI

NCBI Accession YP_009506487.1
Location 988-1389
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGCACGCATCCGGGGAACTCATCACTGCACATCAGGCAGAGAATGGCGTATATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATGCACCGAGTAGAAGACATCCTGTTCACAGGGACCAGAGTGTATCACATCCAGATCCGGTTCAACCACAACCTCAGGAGAGCGTTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCGATGAGAGCTTCTGGGACGACTTATTCAAGTTGGTCGAGGCATGTAAGTCATGCTGTACTTACAACAATGAGGTGTATTCTGCGCTTTATAATGTCATCCGAAGCAGTTCGATTTCGCAACAGGACAGATCGTATGTCTCTGATGTACTCGGAAGATCATTCAATAAAATTCAAAATTTATTAA
Protein Sequence MHASGELITAHQAENGVYIWEITNPLYFKMHRVEDILFTGTRVYHIQIRFNHNLRRALGLHKAFLNFQVWTTSMRASGTTYSSWSRHVSHAVLTTMRCILRFIMSSEAVRFRNRTDRMSLMYSEDHSIKFKIY

NCBI Accession YP_009506488.1
Location 1397-2482
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGCCAAGTGCTCTATTTCAAAGGAAGAAGCACTTTCCCAATTATTTGCCCTCGAAACCCCAGTTAATAAAAAATATATCAGAGTATGTAGAGAGCTCCATGAAAATGGGGAACCTCATCTACACGTCCTGCTTCAGTTCGAAGGGAAGTTCACATGTACGAATTGCAGATTCTTCGATCTTAAACATCCCTGCAATTCCAATGTATGTCATGGAAAATACGAATCATGCAAGTCCTCCTCAGACGCCAAGACATATATCGAGAAGGACGGAGATTACTGCGAATGGGGTAGTTTTCAGATCGACGGAAGATCTGCTAGAAGGAGGGCAACAGACAGACGACGATGCTACCACAGCGCCGTTGAACGCAGCATTGTACGAGGAGACGCTCTTGAAATCATCAAAGCCGGAGATCCGGAGGCGTACATTGTCAAGCTACCATAACATAAAGGCTAACATCGAACGACTGTTTCAAAAGGCTCCGGAACCATGGACTCCTCCGTTTCAACTCTCCTCGTTCACTAGAGTTCCGGACGAGATGCAAGAGTGGGCAGATGATTATTTTGGGAGGGGTGCCGCTGCGCGGCCTGGAAAGACCGATGAGTATCATCGTCGAAGGGTGATAGTCGGACGGGGAAGACAATGTGGGCTCGTGCGTTTGGCCCACATAATTATTTTAGCGGACACCTGGACTTCAATTCTAGGGTTTACTCAGACAAAGCGGAATATAACGTCATCGATGATGTCACACCGCAATATCTTAAGATTAAGCACTGGAAAGAATTTATTGGGGCCCAAAAAGACTGGCAGTCAAATTGCAAATACGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTCTGCAATCCAGGCGAGGGGGCCAGCTATAAAGATTTCCTTGACAAAGAGGAAAATGCTGCGCTTGAAATCGTGGACCCTCCATAATGCTAAATTCATCTTTCTCGACTCCCCCCTCTATCAAACATCAACACAGGATTGCGAAAAAGAGAGCAACTCAGACGGCGACGGATTCACATCGAGTGCGGCTGCTCCATATACGTCCACATCAACTGCATAG
Protein Sequence MPSALFQRKKHFPNYLPSKPQLIKNISEYVESSMKMGNLIYTSCFSSKGSSHVRIADSSILNIPAIPMYVMENTNHASPPQTPRHISRRTEITANGVVFRSTEDLLEGGQQTDDDATTAPLNAALYEETLLKSSKPEIRRRTLSSYHNIKANIERLFQKAPEPWTPPFQLSSFTRVPDEMQEWADDYFGRGAAARPGKTDEYHRRRVIVGRGRQCGLVRLAHIIILADTWTSILGFTQTKRNITSSMMSHRNILRLSTGKNLLGPKKTGSQIANTESQFKLKEGSHQSCSAIQARGPAIKISLTKRKMLRLKSWTLHNAKFIFLDSPLYQTSTQDCEKESNSDGDGFTSSAAAPYTSTSTA

References More References in PubMed

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10

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