Sidastrum golden leaf spot virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_002823485.1 |
| Isolate |
Brazil |
| Release date |
2018/8/25 |
| Submitter |
Fonseca,M.E.N., Boiteux,L.S., Fernandes,N.A.N., Costa,A.F. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTCCCCCCCTCGCGTGGCGCATTGCTGACCGCTCGATCTAGGCGCGATTGTTTAGGCCCATGCGCTTAGGCCCAGTCCATTTGAATTAAAGATGAAATCTTTAATAAAGACCAATCAAAATGCGTCTGGGAAGCCTAGATATTTGTTCCAATACTTCGGCCCTAAGTTTTATGACGTTATAAAAGTAAAGCAAGCATGACGTCATGATATACTTGAAAATGCCGAAGCGGGATCCCTCATGGCGCTCGATGGCGGGAACCTCAAAGGTAAGCCGCTCCTCCAATTTCTCCCCCCGTGGAGGCCCAAAGGTCAATAAGGCCTCTGAATGGGTTAACAGGCCAATGTACAGGAAGCCCAGGATATACAGGACGCTAAGAACTCCTGATGTTCCTAGAGGCTGTGAAGGGCCATGTAAGGTCCAGTCGTACGAGCAGCGTAACGATATCTCACATGCTGGAAAGGTGATCTGTATCTCCGACGTCACTCGCGGTAGCGGTATCACCCATCGTGTCGGTAAGCGGTTTTGTGTTAAGTCTGTGTATATTTTAGGTAAGATCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGTGTTATGTTCTGGCTGGTCCGGGATCGGAGACCCAACGGCACATCCCCATGGACTTTGGTCATCTGTTCAACATGTTCGACAATGAGCCTAGTACTGCAACTGTTAAGAATGATCTCCGAGATCGTTATCAGGTTCAACACAGATTCTATGCCAAGGTCACTGGTGGTCAATATGCCAGCAATGAGCAGGCCCTGGTCAGGCGGTTTTGGAAGGTCAATACTCATGTCGTGTATAACAACCAGGAAGCTGCTAGATACGAGAACCATACGGAGAATGCCTAGTGTTGTACATGGGCATGTACTCATGCCTCTAATCCCGTGTATGCAACTCTTCAAGATCCGGATCTATTTTTACGATTCGATCTCAATTTAATAAATTTTGAATTTTATTGAATGATCTTCCGAGTACATCAGAGACATACGATCTGTCCTGTTGCGAAATCGAACTGCTTCGGATGACATTATAAAGCGCAGAATACACCTCATTGTTGTAAGTACAGCATGACTTACATGCCTCGACCAACTTGAATAAGTCGTCCCAGAAGCTCTCATCGATGTCGTCCAGACTTGGAAGTTCAGGAATGCCTTGTGGAGACCCAACGCTCTCCTGAGGTTGTGGTTGAACCGGATCTGGATGTGATACACTCTGGTCCCTGTGAACAGGATGTCTTCTACTCGGTGCATCTTGAAATACAGGGGATTTGTTATCTCCCAGATATATACGCCATTCTCTGCCTGATGTGCAGTGATGAGTTCCCCGGATGCGTGCATCCATGACCTATGCAGTTGATGTGGACGTATATGGAGCAGCCGCACTCGATGTGAATCCGTCGCCGTCTGAGTTGCTCTCTTTTTCGCAATCCTGTGTTGATGTTTGATAGAGGGGGGAGTCGAGAAAGATGAATTTAGCATTATGGAGGGTCCACGATTTCAAGCGCAGCATTTTCCTCTTTGTCAAGGAAATCTTTATAGCTGGCCCCCTCGCCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAATAAATTCTTTCCAGTGCTTAATCTTAAGATATTGCGGTGTGACATCATCGATGACGTTATATTCCGCTTTGTCTGAGTAAACCCTAGAATTGAAGTCCAGGTGTCCGCTAAAATAATTATGTGGGCCAAACGCACGAGCCCACATTGTCTTCCCCGTCCGACTATCACCCTTCGACGATGATACTCATCGGTCTTTCCAGGCCGCGCAGCGGCACCCCTCCCAAAATAATCATCTGCCCACTCTTGCATCTCGTCCGGAACTCTAGTGAACGAGGAGAGTTGAAACGGAGGAGTCCATGGTTCCGGAGCCTTTTGAAACAGTCGTTCGATGTTAGCCTTTATGTTATGGTAGCTTGACAATGTACGCCTCCGGATCTCCGGCTTTGATGATTTCAAGAGCGTCTCCTCGTACAATGCTGCGTTCAACGGCGCTGTGGTAGCATCGTCGTCTGTCTGTTGCCCTCCTTCTAGCAGATCTTCCGTCGATCTGAAAACTACCCCATTCGCAGTAATCTCCGTCCTTCTCGATATATGTCTTGGCGTCTGAGGAGGACTTGCATGATTCGTATTTTCCATGACATACATTGGAATTGCAGGGATGTTTAAGATCGAAGAATCTGCAATTCGTACATGTGAACTTCCCTTCGAACTGAAGCAGGACGTGTAGATGAGGTTCCCCATTTTCATGGAGCTCTCTACATACTCTGATATATTTTTTATTAACTGGGGTTTCGAGGGCAAATAATTGGGAAAGTGCTTCTTCCTTTGAAATAGAGCACTTGGCATAAGTGAGGAAATAATTTCTGGATTGTATTTTAAAACGTTTTGCTGGTGGCATTTTTGTAAATAAGGGAGTGTCTCCAATTGAGCTCCTCTCAAACTTGCGATATGTATTGGAGACTACAGACAATATATAGTAGAGAAGTTCTCTAGGACCTCGAGACAAGTGGCGGCCCATCCGTTTAATATT
Gene Information
|
NCBI Accession
|
YP_009506486.1
|
|
Location
|
224-991 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGATATACTTGAAAATGCCGAAGCGGGATCCCTCATGGCGCTCGATGGCGGGAACCTCAAAGGTAAGCCGCTCCTCCAATTTCTCCCCCCGTGGAGGCCCAAAGGTCAATAAGGCCTCTGAATGGGTTAACAGGCCAATGTACAGGAAGCCCAGGATATACAGGACGCTAAGAACTCCTGATGTTCCTAGAGGCTGTGAAGGGCCATGTAAGGTCCAGTCGTACGAGCAGCGTAACGATATCTCACATGCTGGAAAGGTGATCTGTATCTCCGACGTCACTCGCGGTAGCGGTATCACCCATCGTGTCGGTAAGCGGTTTTGTGTTAAGTCTGTGTATATTTTAGGTAAGATCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGTGTTATGTTCTGGCTGGTCCGGGATCGGAGACCCAACGGCACATCCCCATGGACTTTGGTCATCTGTTCAACATGTTCGACAATGAGCCTAGTACTGCAACTGTTAAGAATGATCTCCGAGATCGTTATCAGGTTCAACACAGATTCTATGCCAAGGTCACTGGTGGTCAATATGCCAGCAATGAGCAGGCCCTGGTCAGGCGGTTTTGGAAGGTCAATACTCATGTCGTGTATAACAACCAGGAAGCTGCTAGATACGAGAACCATACGGAGAATGCCTAGTGTTGTACATGGGCATGTACTCATGCCTCTAATCCCGTGTATGCAACTCTTCAAGATCCGGATCTATTTTTACGATTCGATCTCAATTTAA |
|
Protein Sequence
|
MIYLKMPKRDPSWRSMAGTSKVSRSSNFSPRGGPKVNKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRNDISHAGKVICISDVTRGSGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPNGTSPWTLVICSTCSTMSLVLQLLRMISEIVIRFNTDSMPRSLVVNMPAMSRPWSGGFGRSILMSCITTRKLLDTRTIRRMPSVVHGHVLMPLIPCMQLFKIRIYFYDSISI |
|
NCBI Accession
|
YP_009506487.1
|
|
Location
|
988-1389 |
|
Gene Name
|
AC3 |
|
Protein Name
|
replication enhancer protein |
|
Coding Region
|
ATGCACGCATCCGGGGAACTCATCACTGCACATCAGGCAGAGAATGGCGTATATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATGCACCGAGTAGAAGACATCCTGTTCACAGGGACCAGAGTGTATCACATCCAGATCCGGTTCAACCACAACCTCAGGAGAGCGTTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCGATGAGAGCTTCTGGGACGACTTATTCAAGTTGGTCGAGGCATGTAAGTCATGCTGTACTTACAACAATGAGGTGTATTCTGCGCTTTATAATGTCATCCGAAGCAGTTCGATTTCGCAACAGGACAGATCGTATGTCTCTGATGTACTCGGAAGATCATTCAATAAAATTCAAAATTTATTAA |
|
Protein Sequence
|
MHASGELITAHQAENGVYIWEITNPLYFKMHRVEDILFTGTRVYHIQIRFNHNLRRALGLHKAFLNFQVWTTSMRASGTTYSSWSRHVSHAVLTTMRCILRFIMSSEAVRFRNRTDRMSLMYSEDHSIKFKIY |
|
NCBI Accession
|
YP_009506488.1
|
|
Location
|
1397-2482 |
|
Gene Name
|
AC1 |
|
Protein Name
|
replication-associated protein |
|
Coding Region
|
ATGCCAAGTGCTCTATTTCAAAGGAAGAAGCACTTTCCCAATTATTTGCCCTCGAAACCCCAGTTAATAAAAAATATATCAGAGTATGTAGAGAGCTCCATGAAAATGGGGAACCTCATCTACACGTCCTGCTTCAGTTCGAAGGGAAGTTCACATGTACGAATTGCAGATTCTTCGATCTTAAACATCCCTGCAATTCCAATGTATGTCATGGAAAATACGAATCATGCAAGTCCTCCTCAGACGCCAAGACATATATCGAGAAGGACGGAGATTACTGCGAATGGGGTAGTTTTCAGATCGACGGAAGATCTGCTAGAAGGAGGGCAACAGACAGACGACGATGCTACCACAGCGCCGTTGAACGCAGCATTGTACGAGGAGACGCTCTTGAAATCATCAAAGCCGGAGATCCGGAGGCGTACATTGTCAAGCTACCATAACATAAAGGCTAACATCGAACGACTGTTTCAAAAGGCTCCGGAACCATGGACTCCTCCGTTTCAACTCTCCTCGTTCACTAGAGTTCCGGACGAGATGCAAGAGTGGGCAGATGATTATTTTGGGAGGGGTGCCGCTGCGCGGCCTGGAAAGACCGATGAGTATCATCGTCGAAGGGTGATAGTCGGACGGGGAAGACAATGTGGGCTCGTGCGTTTGGCCCACATAATTATTTTAGCGGACACCTGGACTTCAATTCTAGGGTTTACTCAGACAAAGCGGAATATAACGTCATCGATGATGTCACACCGCAATATCTTAAGATTAAGCACTGGAAAGAATTTATTGGGGCCCAAAAAGACTGGCAGTCAAATTGCAAATACGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTCTGCAATCCAGGCGAGGGGGCCAGCTATAAAGATTTCCTTGACAAAGAGGAAAATGCTGCGCTTGAAATCGTGGACCCTCCATAATGCTAAATTCATCTTTCTCGACTCCCCCCTCTATCAAACATCAACACAGGATTGCGAAAAAGAGAGCAACTCAGACGGCGACGGATTCACATCGAGTGCGGCTGCTCCATATACGTCCACATCAACTGCATAG |
|
Protein Sequence
|
MPSALFQRKKHFPNYLPSKPQLIKNISEYVESSMKMGNLIYTSCFSSKGSSHVRIADSSILNIPAIPMYVMENTNHASPPQTPRHISRRTEITANGVVFRSTEDLLEGGQQTDDDATTAPLNAALYEETLLKSSKPEIRRRTLSSYHNIKANIERLFQKAPEPWTPPFQLSSFTRVPDEMQEWADDYFGRGAAARPGKTDEYHRRRVIVGRGRQCGLVRLAHIIILADTWTSILGFTQTKRNITSSMMSHRNILRLSTGKNLLGPKKTGSQIANTESQFKLKEGSHQSCSAIQARGPAIKISLTKRKMLRLKSWTLHNAKFIFLDSPLYQTSTQDCEKESNSDGDGFTSSAAAPYTSTSTA |