Sidastrum golden leaf spot virus

Basic Information

Genus	Begomovirus
NCBI Assembly	GCF_002823485.1
Isolate	Brazil
Release date	2018/8/25
Submitter	Fonseca,M.E.N., Boiteux,L.S., Fernandes,N.A.N., Costa,A.F.
Host	Sidastrum sp.
Vector	Bemisia tabaci
Download	Genome \|GFF3 \|PEP \|CDS

Genomic Organization

JBrowse

Genome

NC_038462

ACCGGATGGCCGCGCGATTTTTCCCCCCCTCGCGTGGCGCATTGCTGACCGCTCGATCTAGGCGCGATTGTTTAGGCCCATGCGCTTAGGCCCAGTCCATTTGAATTAAAGATGAAATCTTTAATAAAGACCAATCAAAATGCGTCTGGGAAGCCTAGATATTTGTTCCAATACTTCGGCCCTAAGTTTTATGACGTTATAAAAGTAAAGCAAGCATGACGTCATGATATACTTGAAAATGCCGAAGCGGGATCCCTCATGGCGCTCGATGGCGGGAACCTCAAAGGTAAGCCGCTCCTCCAATTTCTCCCCCCGTGGAGGCCCAAAGGTCAATAAGGCCTCTGAATGGGTTAACAGGCCAATGTACAGGAAGCCCAGGATATACAGGACGCTAAGAACTCCTGATGTTCCTAGAGGCTGTGAAGGGCCATGTAAGGTCCAGTCGTACGAGCAGCGTAACGATATCTCACATGCTGGAAAGGTGATCTGTATCTCCGACGTCACTCGCGGTAGCGGTATCACCCATCGTGTCGGTAAGCGGTTTTGTGTTAAGTCTGTGTATATTTTAGGTAAGATCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGTGTTATGTTCTGGCTGGTCCGGGATCGGAGACCCAACGGCACATCCCCATGGACTTTGGTCATCTGTTCAACATGTTCGACAATGAGCCTAGTACTGCAACTGTTAAGAATGATCTCCGAGATCGTTATCAGGTTCAACACAGATTCTATGCCAAGGTCACTGGTGGTCAATATGCCAGCAATGAGCAGGCCCTGGTCAGGCGGTTTTGGAAGGTCAATACTCATGTCGTGTATAACAACCAGGAAGCTGCTAGATACGAGAACCATACGGAGAATGCCTAGTGTTGTACATGGGCATGTACTCATGCCTCTAATCCCGTGTATGCAACTCTTCAAGATCCGGATCTATTTTTACGATTCGATCTCAATTTAATAAATTTTGAATTTTATTGAATGATCTTCCGAGTACATCAGAGACATACGATCTGTCCTGTTGCGAAATCGAACTGCTTCGGATGACATTATAAAGCGCAGAATACACCTCATTGTTGTAAGTACAGCATGACTTACATGCCTCGACCAACTTGAATAAGTCGTCCCAGAAGCTCTCATCGATGTCGTCCAGACTTGGAAGTTCAGGAATGCCTTGTGGAGACCCAACGCTCTCCTGAGGTTGTGGTTGAACCGGATCTGGATGTGATACACTCTGGTCCCTGTGAACAGGATGTCTTCTACTCGGTGCATCTTGAAATACAGGGGATTTGTTATCTCCCAGATATATACGCCATTCTCTGCCTGATGTGCAGTGATGAGTTCCCCGGATGCGTGCATCCATGACCTATGCAGTTGATGTGGACGTATATGGAGCAGCCGCACTCGATGTGAATCCGTCGCCGTCTGAGTTGCTCTCTTTTTCGCAATCCTGTGTTGATGTTTGATAGAGGGGGGAGTCGAGAAAGATGAATTTAGCATTATGGAGGGTCCACGATTTCAAGCGCAGCATTTTCCTCTTTGTCAAGGAAATCTTTATAGCTGGCCCCCTCGCCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAATAAATTCTTTCCAGTGCTTAATCTTAAGATATTGCGGTGTGACATCATCGATGACGTTATATTCCGCTTTGTCTGAGTAAACCCTAGAATTGAAGTCCAGGTGTCCGCTAAAATAATTATGTGGGCCAAACGCACGAGCCCACATTGTCTTCCCCGTCCGACTATCACCCTTCGACGATGATACTCATCGGTCTTTCCAGGCCGCGCAGCGGCACCCCTCCCAAAATAATCATCTGCCCACTCTTGCATCTCGTCCGGAACTCTAGTGAACGAGGAGAGTTGAAACGGAGGAGTCCATGGTTCCGGAGCCTTTTGAAACAGTCGTTCGATGTTAGCCTTTATGTTATGGTAGCTTGACAATGTACGCCTCCGGATCTCCGGCTTTGATGATTTCAAGAGCGTCTCCTCGTACAATGCTGCGTTCAACGGCGCTGTGGTAGCATCGTCGTCTGTCTGTTGCCCTCCTTCTAGCAGATCTTCCGTCGATCTGAAAACTACCCCATTCGCAGTAATCTCCGTCCTTCTCGATATATGTCTTGGCGTCTGAGGAGGACTTGCATGATTCGTATTTTCCATGACATACATTGGAATTGCAGGGATGTTTAAGATCGAAGAATCTGCAATTCGTACATGTGAACTTCCCTTCGAACTGAAGCAGGACGTGTAGATGAGGTTCCCCATTTTCATGGAGCTCTCTACATACTCTGATATATTTTTTATTAACTGGGGTTTCGAGGGCAAATAATTGGGAAAGTGCTTCTTCCTTTGAAATAGAGCACTTGGCATAAGTGAGGAAATAATTTCTGGATTGTATTTTAAAACGTTTTGCTGGTGGCATTTTTGTAAATAAGGGAGTGTCTCCAATTGAGCTCCTCTCAAACTTGCGATATGTATTGGAGACTACAGACAATATATAGTAGAGAAGTTCTCTAGGACCTCGAGACAAGTGGCGGCCCATCCGTTTAATATT

Gene Information

NCBI Accession	YP_009506486.1
Location	224-991
Gene Name	AV1
Protein Name	coat protein
Coding Region	ATGATATACTTGAAAATGCCGAAGCGGGATCCCTCATGGCGCTCGATGGCGGGAACCTCAAAGGTAAGCCGCTCCTCCAATTTCTCCCCCCGTGGAGGCCCAAAGGTCAATAAGGCCTCTGAATGGGTTAACAGGCCAATGTACAGGAAGCCCAGGATATACAGGACGCTAAGAACTCCTGATGTTCCTAGAGGCTGTGAAGGGCCATGTAAGGTCCAGTCGTACGAGCAGCGTAACGATATCTCACATGCTGGAAAGGTGATCTGTATCTCCGACGTCACTCGCGGTAGCGGTATCACCCATCGTGTCGGTAAGCGGTTTTGTGTTAAGTCTGTGTATATTTTAGGTAAGATCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGTGTTATGTTCTGGCTGGTCCGGGATCGGAGACCCAACGGCACATCCCCATGGACTTTGGTCATCTGTTCAACATGTTCGACAATGAGCCTAGTACTGCAACTGTTAAGAATGATCTCCGAGATCGTTATCAGGTTCAACACAGATTCTATGCCAAGGTCACTGGTGGTCAATATGCCAGCAATGAGCAGGCCCTGGTCAGGCGGTTTTGGAAGGTCAATACTCATGTCGTGTATAACAACCAGGAAGCTGCTAGATACGAGAACCATACGGAGAATGCCTAGTGTTGTACATGGGCATGTACTCATGCCTCTAATCCCGTGTATGCAACTCTTCAAGATCCGGATCTATTTTTACGATTCGATCTCAATTTAA
Protein Sequence	MIYLKMPKRDPSWRSMAGTSKVSRSSNFSPRGGPKVNKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRNDISHAGKVICISDVTRGSGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPNGTSPWTLVICSTCSTMSLVLQLLRMISEIVIRFNTDSMPRSLVVNMPAMSRPWSGGFGRSILMSCITTRKLLDTRTIRRMPSVVHGHVLMPLIPCMQLFKIRIYFYDSISI

NCBI Accession	YP_009506487.1
Location	988-1389
Gene Name	AC3
Protein Name	replication enhancer protein
Coding Region	ATGCACGCATCCGGGGAACTCATCACTGCACATCAGGCAGAGAATGGCGTATATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATGCACCGAGTAGAAGACATCCTGTTCACAGGGACCAGAGTGTATCACATCCAGATCCGGTTCAACCACAACCTCAGGAGAGCGTTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCGATGAGAGCTTCTGGGACGACTTATTCAAGTTGGTCGAGGCATGTAAGTCATGCTGTACTTACAACAATGAGGTGTATTCTGCGCTTTATAATGTCATCCGAAGCAGTTCGATTTCGCAACAGGACAGATCGTATGTCTCTGATGTACTCGGAAGATCATTCAATAAAATTCAAAATTTATTAA
Protein Sequence	MHASGELITAHQAENGVYIWEITNPLYFKMHRVEDILFTGTRVYHIQIRFNHNLRRALGLHKAFLNFQVWTTSMRASGTTYSSWSRHVSHAVLTTMRCILRFIMSSEAVRFRNRTDRMSLMYSEDHSIKFKIY

NCBI Accession	YP_009506488.1
Location	1397-2482
Gene Name	AC1
Protein Name	replication-associated protein
Coding Region	ATGCCAAGTGCTCTATTTCAAAGGAAGAAGCACTTTCCCAATTATTTGCCCTCGAAACCCCAGTTAATAAAAAATATATCAGAGTATGTAGAGAGCTCCATGAAAATGGGGAACCTCATCTACACGTCCTGCTTCAGTTCGAAGGGAAGTTCACATGTACGAATTGCAGATTCTTCGATCTTAAACATCCCTGCAATTCCAATGTATGTCATGGAAAATACGAATCATGCAAGTCCTCCTCAGACGCCAAGACATATATCGAGAAGGACGGAGATTACTGCGAATGGGGTAGTTTTCAGATCGACGGAAGATCTGCTAGAAGGAGGGCAACAGACAGACGACGATGCTACCACAGCGCCGTTGAACGCAGCATTGTACGAGGAGACGCTCTTGAAATCATCAAAGCCGGAGATCCGGAGGCGTACATTGTCAAGCTACCATAACATAAAGGCTAACATCGAACGACTGTTTCAAAAGGCTCCGGAACCATGGACTCCTCCGTTTCAACTCTCCTCGTTCACTAGAGTTCCGGACGAGATGCAAGAGTGGGCAGATGATTATTTTGGGAGGGGTGCCGCTGCGCGGCCTGGAAAGACCGATGAGTATCATCGTCGAAGGGTGATAGTCGGACGGGGAAGACAATGTGGGCTCGTGCGTTTGGCCCACATAATTATTTTAGCGGACACCTGGACTTCAATTCTAGGGTTTACTCAGACAAAGCGGAATATAACGTCATCGATGATGTCACACCGCAATATCTTAAGATTAAGCACTGGAAAGAATTTATTGGGGCCCAAAAAGACTGGCAGTCAAATTGCAAATACGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTCTGCAATCCAGGCGAGGGGGCCAGCTATAAAGATTTCCTTGACAAAGAGGAAAATGCTGCGCTTGAAATCGTGGACCCTCCATAATGCTAAATTCATCTTTCTCGACTCCCCCCTCTATCAAACATCAACACAGGATTGCGAAAAAGAGAGCAACTCAGACGGCGACGGATTCACATCGAGTGCGGCTGCTCCATATACGTCCACATCAACTGCATAG
Protein Sequence	MPSALFQRKKHFPNYLPSKPQLIKNISEYVESSMKMGNLIYTSCFSSKGSSHVRIADSSILNIPAIPMYVMENTNHASPPQTPRHISRRTEITANGVVFRSTEDLLEGGQQTDDDATTAPLNAALYEETLLKSSKPEIRRRTLSSYHNIKANIERLFQKAPEPWTPPFQLSSFTRVPDEMQEWADDYFGRGAAARPGKTDEYHRRRVIVGRGRQCGLVRLAHIIILADTWTSILGFTQTKRNITSSMMSHRNILRLSTGKNLLGPKKTGSQIANTESQFKLKEGSHQSCSAIQARGPAIKISLTKRKMLRLKSWTLHNAKFIFLDSPLYQTSTQDCEKESNSDGDGFTSSAAAPYTSTSTA

References More References in PubMed

1	Simultaneous Detection of Both RNA and DNA Viruses Infecting Dry Bean and Occurrence of Mixed Infections by BGYMV, BCMV and BCMNV in the Central-West Region of Mexico. Chiquito-Almanza E, et al. Viruses. 2017 Mar 30;9(4):63. doi: 10.3390/v9040063. PMID: 28358318
2	First Report of Moroccan watermelon mosaic virus in Zucchini Crops in Greece. Malandraki I, et al. Plant Dis. 2014 May;98(5):702. doi: 10.1094/PDIS-10-13-1100-PDN. PMID: 30708553

Simultaneous Detection of Both RNA and DNA Viruses Infecting Dry Bean and Occurrence of Mixed Infections by BGYMV, BCMV and BCMNV in the Central-West Region of Mexico.

Chiquito-Almanza E, et al. Viruses. 2017 Mar 30;9(4):63. doi: 10.3390/v9040063.

PMID: 28358318

First Report of Moroccan watermelon mosaic virus in Zucchini Crops in Greece.

Malandraki I, et al. Plant Dis. 2014 May;98(5):702. doi: 10.1094/PDIS-10-13-1100-PDN.

PMID: 30708553