Sida yellow mosaic virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000864865.1 |
| Release date | 2015/2/13 |
| Submitter | Fontes,E.P.B., Fernandes,A.V., Mariano,A.C., Galvao,R.M., Zerbini,F.M. |
| Vector | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_004639
Gene Information
| NCBI Accession | NP_808761.1 |
|---|---|
| Location | 254-1009 |
| Gene Name | AV1 |
| Protein Name | coat protein CP |
| Coding Region | ATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTAAGCCGCTCTTCCAATTTCTCTCCTCGTGGAGGTGGAGGCCCAAAACCCACTAGGGCCTTTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGATCAGAACGCCTGATGTTCCTAGAGGCTGTGAAGGGCCCTGTAAGGTCCAGTCCTACGAGCAACGTCACGATATTTCCCATGTTGGGAAGGTGATGTGTATATCTGATGTGACACGCGGTAACGGTATTACTCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTTATATTTTAGGCAAGATATGGATGGACGAAAATATCAAGCTCAAGAACACACGAACAGTTGCATGTTCTGGTTGGTCCGGGACCGTAGACCGTATGGCACACCAATGGATTTCGGCCAGGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCAACCGTGAAGAACGATCTTCGTGATCGTTTCCAGGTCATGCACAAGTTCTATGCCAAGGTCACGGGTGGACAGTATGCCAGCAATGAGCAGGCGCTGGTCAAGCGGTTTTGGAAGGTCAACAATCATGTGGTCTACAATCACCAGGAAGCTGGCAAGTACGAGAATCACACGGAGAACGCATTGCTACTTTATATGGCATGTACCCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACGAATTAA |
| Protein Sequence | MPKRDPSWRQMAGTSKVSRSSNFSPRGGGGPKPTRAFEWVNRPMYRKPRIYRTIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVLYFRQDMDGRKYQAQEHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
| NCBI Accession | NP_808762.1 |
|---|---|
| Location | 581-862 |
| Gene Name | AC5 |
| Protein Name | AC5 protein |
| Coding Region | ATGATTGTTGACCTTCCAAAACCGCTTGACCAGCGCCTGCTCATTGCTGGCATACTGTCCACCCGTGACCTTGGCATAGAACTTGTGCATGACCTGGAAACGATCACGAAGATCGTTCTTCACGGTTGCAGTACTGGGCTCGTTGTCAAACATGTTGAACACCTGGCCGAAATCCATTGGTGTGCCATACGGTCTACGGTCCCGGACCAACCAGAACATGCAACTGTTCGTGTGTTCTTGAGCTTGATATTTTCGTCCATCCATATCTTGCCTAAAATATAA |
| Protein Sequence | MIVDLPKPLDQRLLIAGILSTRDLGIELVHDLETITKIVLHGCSTGLVVKHVEHLAEIHWCAIRSTVPDQPEHATVRVFLSLIFSSIHILPKI |
| NCBI Accession | NP_808763.1 |
|---|---|
| Location | 1006-1407 |
| Gene Name | AC3 |
| Protein Name | replication enhancer protein Ren |
| Coding Region | ATGGGATTCACGCACCGAGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATATCTGGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACCTGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAGAGCATTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAGGTTTAGACAGTTAGTCATGATGTATTTAGACCAATTAGGCGTTATTACGCTTAATAATGTACTTAGAGCTGTTTATTTTGCAACTGACAGATCATATGTCAGATATGTACTGGAAAATCATGAAATAAAATTCAAAATTTATTAA |
| Protein Sequence | MGFTHRGNSSLCLKQRMASISGEITNPLYFKIYHVEDLLYTTTRVYHVQIRFNHNLRRALGLHKAFLNFQVWTTSLTASGTTYLIRFRQLVMMYLDQLGVITLNNVLRAVYFATDRSYVRYVLENHEIKFKIY |
| NCBI Accession | NP_808764.1 |
|---|---|
| Location | 1151-1543 |
| Gene Name | AC2 |
| Protein Name | transactivator protein Trap |
| Coding Region | ATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAACCACGACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAGAAGGATTGATCTAGCGTGCGGGTGCTCCATATACGTCCACATCAACTGCAGCAACGATGGGATTCACGCACCGAGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATATCTGGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACCTGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAGAGCATTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAG |
| Protein Sequence | MLNSSSSTPPSIKPRHRAAKRRGTRRRRIDLACGCSIYVHINCSNDGIHAPRELITVPQAENGVYIWGDNKSPVFQDIPRRGPVVHDDQSVPRTDTVQPQPQESIGSPQGIPELPSLDDISDSFWNDLFD |
| NCBI Accession | NP_808765.1 |
|---|---|
| Location | 1464-2540 |
| Gene Name | AC1 |
| Protein Name | replication associated protein Rep |
| Coding Region | ATGCCTTCTCCAAGGGCCTTTAGAATAAATTCCAAAAACTATTTTCTTACATATCCCAAGTGCTCCTTGACCAAAGAGGAAGCACTTTCCCAATTGAAAGAGTTGAACACCCCTACCAGTAAGAAATTCATCCGTGTTTCAAGGGAATTGCACGAAGATGGGAGCCCTCACCTCCACGTGCTTATCCAGTTCGAAGGGAAGTACAATTGCAAGAACAACAGGTTCTTCGACCTCGTCTCCCCTTCCAGGTCAACACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCGTCAGACGTTAAAAAATACGTGGAGAAAGACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATCCACGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGATACGTATGCGAAAGTTCTAAATGCTCAATCTGCGGAACAAGCATTGCAGATTTTGAAAGAAGAGCAACCGAGGGATTACGTCTTACATCTGGATAAAGTACAAACGCATGTCCAGAAGTTATTCAAAAAGGCTCCGGAGCCGTGGGTTCCTCCGTTTCCACTCTCCTCCTTCACTAACGTTCCCGACGAGATGCAAGAGTGGGCGGATGATTATTTTGGGAGGGGTTCCGCTGCGCGGCCATTGAGACCTATGAGTTTGATAGTGGAAGGTGATTCAAGGACAGGGAAAGACGATGTGGGCTCGTGCATTAGCCCACATAATTACTTAAGTGGACATCTGGACTTCAATAATAGGGTTTACTCAAACGAAGTGGATTATAACGTCATTGATGATGTCACTCCGCAATATCTAAAGTTAAAGCACTGGAAGGAGCTGATTGGTGCTCAAAAAGACTGGCAGTCAAATTGTAAGTACGGAAAGCCAGTTCAAATTAAAGGTGGAATCCCATCAATCGTGCTCTGCAATCCTGGGGAGGGAGTCAGTTATAAAGAGTTCCTCGACAAAGAGGAGAATGCAGGTCTAAAGTCGTGGACACTCCACAATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAACCACGACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAG |
| Protein Sequence | MPSPRAFRINSKNYFLTYPKCSLTKEEALSQLKELNTPTSKKFIRVSRELHEDGSPHLHVLIQFEGKYNCKNNRFFDLVSPSRSTHFHPNIQGAKSSSDVKKYVEKDGDFIDFGVFQIDPRSARGGCQTANDTYAKVLNAQSAEQALQILKEEQPRDYVLHLDKVQTHVQKLFKKAPEPWVPPFPLSSFTNVPDEMQEWADDYFGRGSAARPLRPMSLIVEGDSRTGKDDVGSCISPHNYLSGHLDFNNRVYSNEVDYNVIDDVTPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGVSYKEFLDKEENAGLKSWTLHNAKFIFLDSPLYQTTTQSGEEERNSP |
| NCBI Accession | NP_808766.1 |
|---|---|
| Location | 2126-2383 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGAGCCCTCACCTCCACGTGCTTATCCAGTTCGAAGGGAAGTACAATTGCAAGAACAACAGGTTCTTCGACCTCGTCTCCCCTTCCAGGTCAACACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCGTCAGACGTTAAAAAATACGTGGAGAAAGACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATCCACGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGATACGTATGCGAAAGTTCTAA |
| Protein Sequence | MGALTSTCLSSSKGSTIARTTGSSTSSPLPGQHISIRTFRELRARQTLKNTWRKTETSLILEFSKSIHDQLEEVAKLPTIRMRKF |
References More References in PubMed
| 1 |
Wang D, et al. Plant Dis. 2024 Apr;108(4):877-886. doi: 10.1094/PDIS-07-23-1346-RE. Epub 2024 Apr 4. PMID: 37743589 |
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| 2 |
Characterization of sida golden mottle virus isolated from Sida santaremensis Monteiro in Florida. Al-Aqeel HA, et al. Arch Virol. 2018 Oct;163(10):2907-2911. doi: 10.1007/s00705-018-3903-x. Epub 2018 Jun 21. PMID: 29931396 |
| 3 |
Macroptilium yellow mosaic virus, a New Begomovirus Infecting Macroptilium lathyroides in Cuba. Ramos PL, et al. Plant Dis. 2002 Sep;86(9):1049. doi: 10.1094/PDIS.2002.86.9.1049B. PMID: 30818538 |
| 4 |
García-Rodríguez DA, et al. PeerJ. 2023 Mar 22;11:e15047. doi: 10.7717/peerj.15047. eCollection 2023. PMID: 36974135 |
| 5 |
Chahwala FD, et al. Arch Virol. 2021 Jan;166(1):299-302. doi: 10.1007/s00705-020-04843-9. Epub 2020 Oct 17. PMID: 33068191 |
| 6 |
Croton golden mosaic virus: a new bipartite begomovirus isolated from Croton hirtus in Colombia. Vaca-Vaca JC, et al. Arch Virol. 2018 Nov;163(11):3199-3202. doi: 10.1007/s00705-018-3989-1. Epub 2018 Aug 10. PMID: 30097742 |
| 7 |
De La Torre-Almaraz R, et al. Plant Dis. 2006 Mar;90(3):378. doi: 10.1094/PD-90-0378B. PMID: 30786574 |
| 8 |
First report of the complete sequence of Sida golden yellow vein virus from Jamaica. Stewart CS, et al. Arch Virol. 2011 Aug;156(8):1481-4. doi: 10.1007/s00705-011-1030-z. Epub 2011 May 29. PMID: 21625977 |
| 9 |
Andrade EC, et al. J Gen Virol. 2006 Dec;87(Pt 12):3687-3696. doi: 10.1099/vir.0.82279-0. PMID: 17098986 |
| 10 |
First Report of Okra yellow mosaic Mexico virus in Okra in the United States. Hernandez-Zepeda C, et al. Plant Dis. 2010 Jul;94(7):924. doi: 10.1094/PDIS-94-7-0924B. PMID: 30743573 |