Sida yellow mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000864865.1
Release date 2015/2/13
Submitter Fontes,E.P.B., Fernandes,A.V., Mariano,A.C., Galvao,R.M., Zerbini,F.M.
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_004639
ACCGGATGGCCGGCGCGATTTTCCCCCCCCTCACGTGGCGCTCTGGTGGCCGCTCGATCTCTCTCTCCCCCGCTCCCGAGGAGCCCCCCCTGCTCGCGCGATGTTCTCCTTTAATTCAAATTAAAGGATTTAACTTTTGTCTGACCAATTATAGTGCGCCTGAGGAGCTTAGATAACTGTGTTAATACTTGGTCCCTAAGTTTTATGGCCCCTATAAAACTAAAGCAAGCATGACGTCAGTCTTTAATTCGAAATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTAAGCCGCTCTTCCAATTTCTCTCCTCGTGGAGGTGGAGGCCCAAAACCCACTAGGGCCTTTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGATCAGAACGCCTGATGTTCCTAGAGGCTGTGAAGGGCCCTGTAAGGTCCAGTCCTACGAGCAACGTCACGATATTTCCCATGTTGGGAAGGTGATGTGTATATCTGATGTGACACGCGGTAACGGTATTACTCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTTATATTTTAGGCAAGATATGGATGGACGAAAATATCAAGCTCAAGAACACACGAACAGTTGCATGTTCTGGTTGGTCCGGGACCGTAGACCGTATGGCACACCAATGGATTTCGGCCAGGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCAACCGTGAAGAACGATCTTCGTGATCGTTTCCAGGTCATGCACAAGTTCTATGCCAAGGTCACGGGTGGACAGTATGCCAGCAATGAGCAGGCGCTGGTCAAGCGGTTTTGGAAGGTCAACAATCATGTGGTCTACAATCACCAGGAAGCTGGCAAGTACGAGAATCACACGGAGAACGCATTGCTACTTTATATGGCATGTACCCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACGAATTAATAAATTTTGAATTTTATTTCATGATTTTCCAGTACATATCTGACATATGATCTGTCAGTTGCAAAATAAACAGCTCTAAGTACATTATTAAGCGTAATAACGCCTAATTGGTCTAAATACATCATGACTAACTGTCTAAACCTAATCAAATAAGTCGTTCCAGAAGCTGTCAGAGATGTCGTCCAGACTTGGAAGTTCAGGAATGCCTTGTGGAGACCCAATGCTCTCCTGAGGTTGTGGTTGAACCGTATCTGTACGTGGTACACTCTGGTCGTCGTGTACAACAGGTCCTCTACGTGGTATATCTTGAAATACAGGGGATTTGTTATCTCCCCAGATATAGACGCCATTCTCTGCTTGAGGCACAGTGATGAGTTCCCTCGGTGCGTGAATCCCATCGTTGCTGCAGTTGATGTGGACGTATATGGAGCACCCGCACGCTAGATCAATCCTTCTACGGCGAGTTCCTCTCCTCTTCGCCGCTCTGTGTCGTGGTTTGATAGAGGGGGGAGTCGAGGAAGATGAATTTAGCATTGTGGAGTGTCCACGACTTTAGACCTGCATTCTCCTCTTTGTCGAGGAACTCTTTATAACTGACTCCCTCCCCAGGATTGCAGAGCACGATTGATGGGATTCCACCTTTAATTTGAACTGGCTTTCCGTACTTACAATTTGACTGCCAGTCTTTTTGAGCACCAATCAGCTCCTTCCAGTGCTTTAACTTTAGATATTGCGGAGTGACATCATCAATGACGTTATAATCCACTTCGTTTGAGTAAACCCTATTATTGAAGTCCAGATGTCCACTTAAGTAATTATGTGGGCTAATGCACGAGCCCACATCGTCTTTCCCTGTCCTTGAATCACCTTCCACTATCAAACTCATAGGTCTCAATGGCCGCGCAGCGGAACCCCTCCCAAAATAATCATCCGCCCACTCTTGCATCTCGTCGGGAACGTTAGTGAAGGAGGAGAGTGGAAACGGAGGAACCCACGGCTCCGGAGCCTTTTTGAATAACTTCTGGACATGCGTTTGTACTTTATCCAGATGTAAGACGTAATCCCTCGGTTGCTCTTCTTTCAAAATCTGCAATGCTTGTTCCGCAGATTGAGCATTTAGAACTTTCGCATACGTATCGTTGGCAGTTTGGCAACCTCCTCTAGCTGATCGTGGATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTATTTTTTAACGTCTGACGAGCTCTTAGCTCCCTGAATGTTCGGATGGAAATGTGTTGACCTGGAAGGGGAGACGAGGTCGAAGAACCTGTTGTTCTTGCAATTGTACTTCCCTTCGAACTGGATAAGCACGTGGAGGTGAGGGCTCCCATCTTCGTGCAATTCCCTTGAAACACGGATGAATTTCTTACTGGTAGGGGTGTTCAACTCTTTCAATTGGGAAAGTGCTTCCTCTTTGGTCAAGGAGCACTTGGGATATGTAAGAAAATAGTTTTTGGAATTTATTCTAAAGGCCCTTGGAGAAGGCATATTTGCAGAAATGAACTGGGGTCTCGGCAACTCTGTGATATGAACTGGGGACTGGGGTCTTATTTATAGCAGACTCCATATAATTTTTGATGGACACGTGGCGGCCATCCGCTATAATATT

Gene Information

NCBI Accession NP_808761.1
Location 254-1009
Gene Name AV1
Protein Name coat protein CP
Coding Region ATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTAAGCCGCTCTTCCAATTTCTCTCCTCGTGGAGGTGGAGGCCCAAAACCCACTAGGGCCTTTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGATCAGAACGCCTGATGTTCCTAGAGGCTGTGAAGGGCCCTGTAAGGTCCAGTCCTACGAGCAACGTCACGATATTTCCCATGTTGGGAAGGTGATGTGTATATCTGATGTGACACGCGGTAACGGTATTACTCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTTATATTTTAGGCAAGATATGGATGGACGAAAATATCAAGCTCAAGAACACACGAACAGTTGCATGTTCTGGTTGGTCCGGGACCGTAGACCGTATGGCACACCAATGGATTTCGGCCAGGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCAACCGTGAAGAACGATCTTCGTGATCGTTTCCAGGTCATGCACAAGTTCTATGCCAAGGTCACGGGTGGACAGTATGCCAGCAATGAGCAGGCGCTGGTCAAGCGGTTTTGGAAGGTCAACAATCATGTGGTCTACAATCACCAGGAAGCTGGCAAGTACGAGAATCACACGGAGAACGCATTGCTACTTTATATGGCATGTACCCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACGAATTAA
Protein Sequence MPKRDPSWRQMAGTSKVSRSSNFSPRGGGGPKPTRAFEWVNRPMYRKPRIYRTIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVLYFRQDMDGRKYQAQEHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN

NCBI Accession NP_808762.1
Location 581-862
Gene Name AC5
Protein Name AC5 protein
Coding Region ATGATTGTTGACCTTCCAAAACCGCTTGACCAGCGCCTGCTCATTGCTGGCATACTGTCCACCCGTGACCTTGGCATAGAACTTGTGCATGACCTGGAAACGATCACGAAGATCGTTCTTCACGGTTGCAGTACTGGGCTCGTTGTCAAACATGTTGAACACCTGGCCGAAATCCATTGGTGTGCCATACGGTCTACGGTCCCGGACCAACCAGAACATGCAACTGTTCGTGTGTTCTTGAGCTTGATATTTTCGTCCATCCATATCTTGCCTAAAATATAA
Protein Sequence MIVDLPKPLDQRLLIAGILSTRDLGIELVHDLETITKIVLHGCSTGLVVKHVEHLAEIHWCAIRSTVPDQPEHATVRVFLSLIFSSIHILPKI

NCBI Accession NP_808763.1
Location 1006-1407
Gene Name AC3
Protein Name replication enhancer protein Ren
Coding Region ATGGGATTCACGCACCGAGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATATCTGGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACCTGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAGAGCATTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAGGTTTAGACAGTTAGTCATGATGTATTTAGACCAATTAGGCGTTATTACGCTTAATAATGTACTTAGAGCTGTTTATTTTGCAACTGACAGATCATATGTCAGATATGTACTGGAAAATCATGAAATAAAATTCAAAATTTATTAA
Protein Sequence MGFTHRGNSSLCLKQRMASISGEITNPLYFKIYHVEDLLYTTTRVYHVQIRFNHNLRRALGLHKAFLNFQVWTTSLTASGTTYLIRFRQLVMMYLDQLGVITLNNVLRAVYFATDRSYVRYVLENHEIKFKIY

NCBI Accession NP_808764.1
Location 1151-1543
Gene Name AC2
Protein Name transactivator protein Trap
Coding Region ATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAACCACGACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAGAAGGATTGATCTAGCGTGCGGGTGCTCCATATACGTCCACATCAACTGCAGCAACGATGGGATTCACGCACCGAGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATATCTGGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACCTGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAGAGCATTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAG
Protein Sequence MLNSSSSTPPSIKPRHRAAKRRGTRRRRIDLACGCSIYVHINCSNDGIHAPRELITVPQAENGVYIWGDNKSPVFQDIPRRGPVVHDDQSVPRTDTVQPQPQESIGSPQGIPELPSLDDISDSFWNDLFD

NCBI Accession NP_808765.1
Location 1464-2540
Gene Name AC1
Protein Name replication associated protein Rep
Coding Region ATGCCTTCTCCAAGGGCCTTTAGAATAAATTCCAAAAACTATTTTCTTACATATCCCAAGTGCTCCTTGACCAAAGAGGAAGCACTTTCCCAATTGAAAGAGTTGAACACCCCTACCAGTAAGAAATTCATCCGTGTTTCAAGGGAATTGCACGAAGATGGGAGCCCTCACCTCCACGTGCTTATCCAGTTCGAAGGGAAGTACAATTGCAAGAACAACAGGTTCTTCGACCTCGTCTCCCCTTCCAGGTCAACACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCGTCAGACGTTAAAAAATACGTGGAGAAAGACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATCCACGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGATACGTATGCGAAAGTTCTAAATGCTCAATCTGCGGAACAAGCATTGCAGATTTTGAAAGAAGAGCAACCGAGGGATTACGTCTTACATCTGGATAAAGTACAAACGCATGTCCAGAAGTTATTCAAAAAGGCTCCGGAGCCGTGGGTTCCTCCGTTTCCACTCTCCTCCTTCACTAACGTTCCCGACGAGATGCAAGAGTGGGCGGATGATTATTTTGGGAGGGGTTCCGCTGCGCGGCCATTGAGACCTATGAGTTTGATAGTGGAAGGTGATTCAAGGACAGGGAAAGACGATGTGGGCTCGTGCATTAGCCCACATAATTACTTAAGTGGACATCTGGACTTCAATAATAGGGTTTACTCAAACGAAGTGGATTATAACGTCATTGATGATGTCACTCCGCAATATCTAAAGTTAAAGCACTGGAAGGAGCTGATTGGTGCTCAAAAAGACTGGCAGTCAAATTGTAAGTACGGAAAGCCAGTTCAAATTAAAGGTGGAATCCCATCAATCGTGCTCTGCAATCCTGGGGAGGGAGTCAGTTATAAAGAGTTCCTCGACAAAGAGGAGAATGCAGGTCTAAAGTCGTGGACACTCCACAATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAACCACGACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAG
Protein Sequence MPSPRAFRINSKNYFLTYPKCSLTKEEALSQLKELNTPTSKKFIRVSRELHEDGSPHLHVLIQFEGKYNCKNNRFFDLVSPSRSTHFHPNIQGAKSSSDVKKYVEKDGDFIDFGVFQIDPRSARGGCQTANDTYAKVLNAQSAEQALQILKEEQPRDYVLHLDKVQTHVQKLFKKAPEPWVPPFPLSSFTNVPDEMQEWADDYFGRGSAARPLRPMSLIVEGDSRTGKDDVGSCISPHNYLSGHLDFNNRVYSNEVDYNVIDDVTPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGVSYKEFLDKEENAGLKSWTLHNAKFIFLDSPLYQTTTQSGEEERNSP

NCBI Accession NP_808766.1
Location 2126-2383
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCCCTCACCTCCACGTGCTTATCCAGTTCGAAGGGAAGTACAATTGCAAGAACAACAGGTTCTTCGACCTCGTCTCCCCTTCCAGGTCAACACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCGTCAGACGTTAAAAAATACGTGGAGAAAGACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATCCACGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGATACGTATGCGAAAGTTCTAA
Protein Sequence MGALTSTCLSSSKGSTIARTTGSSTSSPLPGQHISIRTFRELRARQTLKNTWRKTETSLILEFSKSIHDQLEEVAKLPTIRMRKF

References More References in PubMed

1

An interspecies recombinant sida yellow mosaic China virus isolate and betasatellite cause a leaf curl disease in tobacco in Hainan, China.

Wang D, et al.  Plant Dis. 2023 Sep 24. doi: 10.1094/PDIS-07-23-1346-RE. Online ahead of print.

PMID: 37743589

2

Macroptilium yellow mosaic virus, a New Begomovirus Infecting Macroptilium lathyroides in Cuba.

Ramos PL, et al.  Plant Dis. 2002 Sep;86(9):1049. doi: 10.1094/PDIS.2002.86.9.1049B.

PMID: 30818538

3

Characterization of sida golden mottle virus isolated from Sida santaremensis Monteiro in Florida.

Al-Aqeel HA, et al.  Arch Virol. 2018 Oct;163(10):2907-2911. doi: 10.1007/s00705-018-3903-x. Epub 2018 Jun 21.

PMID: 29931396

4

A novel monopartite begomovirus and satellites associated with yellow mosaic disease of Sida spp. in India.

Chahwala FD, et al.  Arch Virol. 2021 Jan;166(1):299-302. doi: 10.1007/s00705-020-04843-9. Epub 2020 Oct 17.

PMID: 33068191

5

A New Begomovirus Inducing Yellow Mottle in Okra Crops in Mexico is Related to Sida yellow vein virus.

De La Torre-Almaraz R, et al.  Plant Dis. 2006 Mar;90(3):378. doi: 10.1094/PD-90-0378B.

PMID: 30786574

6

Croton golden mosaic virus: a new bipartite begomovirus isolated from Croton hirtus in Colombia.

Vaca-Vaca JC, et al.  Arch Virol. 2018 Nov;163(11):3199-3202. doi: 10.1007/s00705-018-3989-1. Epub 2018 Aug 10.

PMID: 30097742

7

Sida chlorotic leaf virus: a new recombinant begomovirus found in non-cultivated plants and Cucumis sativus L.

García-Rodríguez DA, et al.  PeerJ. 2023 Mar 22;11:e15047. doi: 10.7717/peerj.15047. eCollection 2023.

PMID: 36974135

8

First Report of Okra yellow mosaic Mexico virus in Okra in the United States.

Hernandez-Zepeda C, et al.  Plant Dis. 2010 Jul;94(7):924. doi: 10.1094/PDIS-94-7-0924B.

PMID: 30743573

9

First report of the complete sequence of Sida golden yellow vein virus from Jamaica.

Stewart CS, et al.  Arch Virol. 2011 Aug;156(8):1481-4. doi: 10.1007/s00705-011-1030-z. Epub 2011 May 29.

PMID: 21625977

10

Molecular characterization and experimental host range of an isolate of Wissadula golden mosaic St. Thomas virus.

Collins AM, et al.  Virus Genes. 2009 Dec;39(3):387-95. doi: 10.1007/s11262-009-0401-y. Epub 2009 Sep 20.

PMID: 19768650