Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000841285.1 |
Release date | 2015/2/12 |
Submitter | Fontes,E.P.B., Fernandes,A.V., Mariano,A.C., Galvao,R.M., Zerbini,F.M. |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_808749.1 |
---|---|
Location | 255-1010 |
Gene Name | AV1 |
Protein Name | coat protein CP |
Coding Region | ATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTAAGCCGCTCTTCCAATTTCTCTCCTCGTGGAGGTATAGGCCCAAAGTTCAACAAGGCCTCTGAATGGGTTAACAGGCCCATGTATAGGAAGCCCAGGATATATCGGACGATCAGAACGCCTGATGTTCCTAGAGGCTGTGAAGGGCCCTGTAAGGTCCAGTCCTACGAGCAACGTCACGATATCTCCCATGTTGGGAAGGTGATGTGTATATCTGATGTGACACGCGGTAACGGTATTACTCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATACTAGGTAAGATATGGATGGACGAGAATATCAAGCTCAAGAACCACACGAACAGTTGCATGTTCTGGTTGGTCCGGGACCGTAGACCGTATGGCACACCAATGGATTTCGGCCAGGTGTTCAACATGTTTGACAACGAGCCCAGCACTGCAACCGTGAAGAACGATCTCCGTGATCGTTTCCAGGTCATGCACAAGTTCTATGCCAAGGTCACGGGTGGACAGTATGCCAGCAATGAGCAGGCGCTGGTCAAGCGGTTTTGGAAGGTCAACAATCATGTGGTCTACAACCACCAGGAAGCTGGCAAGTACGAGAATCACACGGAGAACGCATTATTATTGTATATGGCATGTACCCATGCCTCTAACCCTGTGTATGCAACGCTGCAGATTCGAATCTATTTCTACGAGTCGATCACCAATTAA |
Protein Sequence | MPKRDPSWRQMAGTSKVSRSSNFSPRGGIGPKFNKASEWVNRPMYRKPRIYRTIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLQIRIYFYESITN |
NCBI Accession | NP_808750.1 |
---|---|
Location | 588-863 |
Gene Name | AC5 |
Protein Name | AC5 protein |
Coding Region | ATGATTGTTGACCTTCCAAAACCGCTTGACCAGCGCCTGCTCATTGCTGGCATACTGTCCACCCGTGACCTTGGCATAGAACTTGTGCATGACCTGGAAACGATCACGGAGATCGTTCTTCACGGTTGCAGTGCTGGGCTCGTTGTCAAACATGTTGAACACCTGGCCGAAATCCATTGGTGTGCCATACGGTCTACGGTCCCGGACCAACCAGAACATGCAACTGTTCGTGTGGTTCTTGAGCTTGATATTCTCGTCCATCCATATCTTACCTAG |
Protein Sequence | MIVDLPKPLDQRLLIAGILSTRDLGIELVHDLETITEIVLHGCSAGLVVKHVEHLAEIHWCAIRSTVPDQPEHATVRVVLELDILVHPYLT |
NCBI Accession | NP_808751.1 |
---|---|
Location | 1007-1405 |
Gene Name | AC3 |
Protein Name | replication enhancer protein Ren |
Coding Region | ATGGATTCACGCACCGGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACCTGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAGAGCATTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAGGTTTAGACGTTTAGTCATGATGTATTTAGACCAATTAGGCGTCATCACGCTTAATAATGTACTTAGGGCTGTTTATTTTGCGACTGACAGATCATATGTCAGACATGTACTGGAAAATCATGAAATAAAATTCAAGCTTTATTAA |
Protein Sequence | MDSRTGELITVPQAENGVYIWEITNPLYFKIYHVEDLLYTTTRVYHVQIRFNHNLRRALGLHKAFLNFQVWTTSLTASGTTYLIRFRRLVMMYLDQLGVITLNNVLRAVYFATDRSYVRHVLENHEIKFKLY |
NCBI Accession | NP_808752.1 |
---|---|
Location | 1152-1541 |
Gene Name | AC2 |
Protein Name | transactivator protein Trap |
Coding Region | ATGCTAAATTCATATTCCTCGACTCCCCCCTCTATCAAACCACGACACAGGGCGGCGAAGAAGAGAGGAACTCGCCGTAGAAGGATTGATCTAGAGTGCGGGTGCTCCATATACGTCCACATCAGCTGCAGCAACAATGGATTCACGCACCGGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACCTGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAGAGCATTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAG |
Protein Sequence | MLNSYSSTPPSIKPRHRAAKKRGTRRRRIDLECGCSIYVHISCSNNGFTHRGTHHCASSREWRLYLGDNKSPVFQDIPRRGPVVHDDQSVPRTDTVQPQPQESIGSPQGIPELPSLDDISDSFWNDLFD |
NCBI Accession | NP_808753.1 |
---|---|
Location | 1462-2544 |
Gene Name | AC1 |
Protein Name | replication associated protein Rep |
Coding Region | ATGCCATCCAAACCACGTCGTTTTAGAGTGCAGGCTAAAAACATTTTCCTTACATATCCACAGTGCCCTCTTACAAAAGAGGAGGCACTTTCCCAATTGCAAGCTATTCAATTACCCTCCAATAAGAAATTCATCAAAATATGCAGAGAGCTTCATGAAGATGGGCAACCTCACCTCCACATCTTGTTGCAATTGGAAGGAAAAATCCAAGTCACAAATAACCGACTGTTCGACCTGGTATCCCCAACTAGGTCAGCACATTTCCATCCGAACATACAGGAGCTAATGGAGCTCCGACGTCAAGTCATACATTTACAAGGACGGGAGATACAGTGGGAATGGGGACAGTTCCAGGTCGACGGAAGAAGTTCAAGGGGAGGACAACAGACAGCTAATGACGCTGCAGCTGAGCCGTTTAATGATCCGGATAAACACACGGCTCTCCAAATCATTAGGGAGAAGTTGCCTGAGAAATATCTTTTTCAGTTTCACAATCTAAATTCTAATTTAGATAGGATTTTCTTAAAGGCTCCGGAGCCATGGACTCCGCCGTTTTCACTTTCCTCCTTCACTAACGTTCCCGTCGAGATGCAAGAGTGGGCGGACGATTATTTTGGGAGGGGTTCAGCTGCGCGGCCATTGAGACCTATGAGTTTGATAGTCGAAGGTGATTCAAGGACAGGGAAGACAATGTGGGCTCGTTCGTTAGGCCCACATAATTACTTGAGTGGACATCTGGACTTCAATTCTAAGGTCTATTCAAACGAAGTGGAATACAACGTCATCGATGATGTCACACCCCAATATCTAAAGTTAAAGCACTGGAAGGGAGCTGATTGGTGCTCAAAAAGACTGGCAGTCAAATTGTTAAGTTACGGAAAGCCAGTTCAAATTAAAGGTGGAATACCATCAATCGTGCTCTGCAATCCTGGGGAGGGAGTCAGTTATAAAGAATTCCTCGACAAAGAAGAGAATGCAGGTCTAAAGTCGTGGACACTCCACAATGCTAAATTCATATTCCTCGACTCCCCCCTCTATCAAACCACGACACAGGGCGGCGAAGAAGAGAGGAACTCGCCGTAG |
Protein Sequence | MPSKPRRFRVQAKNIFLTYPQCPLTKEEALSQLQAIQLPSNKKFIKICRELHEDGQPHLHILLQLEGKIQVTNNRLFDLVSPTRSAHFHPNIQELMELRRQVIHLQGREIQWEWGQFQVDGRSSRGGQQTANDAAAEPFNDPDKHTALQIIREKLPEKYLFQFHNLNSNLDRIFLKAPEPWTPPFSLSSFTNVPVEMQEWADDYFGRGSAARPLRPMSLIVEGDSRTGKTMWARSLGPHNYLSGHLDFNSKVYSNEVEYNVIDDVTPQYLKLKHWKGADWCSKRLAVKLLSYGKPVQIKGGIPSIVLCNPGEGVSYKEFLDKEENAGLKSWTLHNAKFIFLDSPLYQTTTQGGEEERNSP |
NCBI Accession | NP_808754.1 |
---|---|
Location | 2259-2390 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGAAGATGGGCAACCTCACCTCCACATCTTGTTGCAATTGGAAGGAAAAATCCAAGTCACAAATAACCGACTGTTCGACCTGGTATCCCCAACTAGGTCAGCACATTTCCATCCGAACATACAGGAGCTAA |
Protein Sequence | MKMGNLTSTSCCNWKEKSKSQITDCSTWYPQLGQHISIRTYRS |
1 |
Characterization of sida golden mottle virus isolated from Sida santaremensis Monteiro in Florida. Al-Aqeel HA, et al. Arch Virol. 2018 Oct;163(10):2907-2911. doi: 10.1007/s00705-018-3903-x. Epub 2018 Jun 21. PMID: 29931396 |
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2 |
De La Torre-Almaraz R, et al. Plant Dis. 2006 Mar;90(3):378. doi: 10.1094/PD-90-0378B. PMID: 30786574 |
3 |
Molecular and biological characterization of corchorus mottle virus, a new begomovirus from Brazil. Blawid R, et al. Arch Virol. 2013 Dec;158(12):2603-9. doi: 10.1007/s00705-013-1764-x. Epub 2013 Jun 29. PMID: 23812656 |
4 |
Ramos PL, et al. Arch Virol. 2003 Sep;148(9):1697-712. doi: 10.1007/s00705-003-0136-3. PMID: 14505083 |
5 |
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6 |
Two new begomoviruses infecting tomato and Hibiscus sp. in the Amazon region of Brazil. Quadros AFF, et al. Arch Virol. 2019 Jul;164(7):1897-1901. doi: 10.1007/s00705-019-04245-6. Epub 2019 Apr 10. PMID: 30972592 |
7 |
Complete sequence of a new bipartite begomovirus infecting Sida sp. in Northeastern Brazil. Macedo MA, et al. Arch Virol. 2020 Jan;165(1):253-256. doi: 10.1007/s00705-019-04458-9. Epub 2019 Nov 22. PMID: 31758274 |
8 |
First Report of Sida golden mosaic virus Infecting Snap Bean (Phaseolus vulgaris) in Florida. Durham TC, et al. Plant Dis. 2010 Apr;94(4):487. doi: 10.1094/PDIS-94-4-0487B. PMID: 30754495 |
9 |
Croton golden mosaic virus: a new bipartite begomovirus isolated from Croton hirtus in Colombia. Vaca-Vaca JC, et al. Arch Virol. 2018 Nov;163(11):3199-3202. doi: 10.1007/s00705-018-3989-1. Epub 2018 Aug 10. PMID: 30097742 |
10 |
Circomics of Cuban geminiviruses reveals the first alpha-satellite DNA in the Caribbean. Jeske H, et al. Virus Genes. 2014 Oct;49(2):312-24. doi: 10.1007/s11262-014-1090-8. Epub 2014 Jun 19. PMID: 24943118 |