Genus | Begomovirus |
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NCBI Assembly | GCF_002867405.1 |
Release date | 2015/2/12 |
Submitter | Morinaga,T., Ikegami,M., Shimotohno,K., Miura,K. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009507973.1 |
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Location | 512-1282 |
Gene Name | BR1 |
Protein Name | BR1 protein |
Coding Region | ATGTATACGTCTAAGTATAAACGTGGTTCGTCTAACTATCAACGACGAGGTTATTCACGTAGCCAAGGTTTTCGACGAACGTCAATTGTTAAACGACATGATGGTAAGCGTCGACAACATCAATCCAGTAAGTCTAATGAAGATCCTAAATTGTTGGTGCAATGTATACGTGAAAATCAATTTGGTCCTGATTTTGTTATGGCTCATAATACTGCCATATCCACGTTTATTAATTATCCCCAATTGGGTAAGATCGAACCTAATCGATGTAGGTCGTATATGAAGTTGAAACGCTTGCGTTTCAAAGGGACGGTTAAAATTGAACGTGTACACTCTGATGTGAACATGGATGGATTATCTCCTAAGATTGAAGGCGTATTTAGTATTGTTATTGTGGTTGATCGGAAACCACATTTAAATCCCAGTGGATGTCTTCATACATTTGATGAACTATTTGGAGCAAGGATTCATAGCCATGGGAATCTTGCTGTGATGCCTTCTTTGAAAGACCGATTTTACATACGACACGTGTTGAAGCGTGTTTTATCGGTAGATAAAGACACGACTATGATAGACGTTGAGGGTTCCACTTTGTTGTCTAATAAGCGTTATAATATGTGGTCTACGTTTAATGATTTTGATCATGACTCATGTAATGGTGCATATGCTAATATTGCTAAGAACGCTTTATTAGTGTATTATTGTTGGATGTCGGATATTATGTCTAAGGCATCGACATTTGTGTCATTTGATCTTGATTATGTTGGATAA |
Protein Sequence | MYTSKYKRGSSNYQRRGYSRSQGFRRTSIVKRHDGKRRQHQSSKSNEDPKLLVQCIRENQFGPDFVMAHNTAISTFINYPQLGKIEPNRCRSYMKLKRLRFKGTVKIERVHSDVNMDGLSPKIEGVFSIVIVVDRKPHLNPSGCLHTFDELFGARIHSHGNLAVMPSLKDRFYIRHVLKRVLSVDKDTTMIDVEGSTLLSNKRYNMWSTFNDFDHDSCNGAYANIAKNALLVYYCWMSDIMSKASTFVSFDLDYVG |
NCBI Accession | YP_009507974.1 |
---|---|
Location | 1316-2197 |
Gene Name | BL1 |
Protein Name | BL1 protein |
Coding Region | ATGGATTCTCAGTTAGCAAATCCTCCAAATGCATTTAATTATGTAGAGTCACACAGAGACGAATATCAATTGTCTCATGATCTAACTGAGATAATCCTTCAATTTCCTTCCACAGCTTCTCAATTATCTGCGAGATTCAGTCGCAGCTGTATGAAGATCGATCATTGCGTCATAGAATATAGGCAACAGGTGCCTATTAACGCAACAGGATCAGTTGTAGTGGAGATTCATGACAAGAGGATGACAGACAACGAATCATTACAAGCTTCATGGACATTTCCCATTAGATGCAACATAGATCTCCACTACTTTTCATCGTCATTTTTCTCGTTGAAAGACCCAATACCATGGAAACTCTATTATAGAGTTTCAGACACCAACGTTCATCAAAGGACACATTTCGCAAAATTCAAAGGAAAACTGAAATTATCAACGGCTAAACATTCAGTAGATATCCCCTTCCGGGCACCAACAGTTAAAATATTATCAAAGCAGTTTTCCAATAAGGACGTCGACTTCTCCCACGTCGACTATGGGAGGTGGGAAAGGAAATTGATCCGGTCCGCATCATTATCAAGGTATGGTCTACAAGGCCCAATCGAATTAAAACCAGGAGAGTCTTGGGCCTCAAGAAGTACAATCGGTATGTCTCATGTAGATGCGGACTCGGACTTAGAGAGCGCGATACACCCATACAAGGATTTAAACAGACTGGGAACCAGTGTTTTGGACCCGGGAGATTCAGCGTCAATTATTGGGGCTCAGAGAGCCCAATCAAACATAACATTGTCAATTGCACAATTAAACGAAATTGTGCGATCAACGGTACATGAATGTATCAACAACAATTGTACTCCTTCTCAACCAAAATCTTTGAAATAA |
Protein Sequence | MDSQLANPPNAFNYVESHRDEYQLSHDLTEIILQFPSTASQLSARFSRSCMKIDHCVIEYRQQVPINATGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFSNKDVDFSHVDYGRWERKLIRSASLSRYGLQGPIELKPGESWASRSTIGMSHVDADSDLESAIHPYKDLNRLGTSVLDPGDSASIIGAQRAQSNITLSIAQLNEIVRSTVHECINNNCTPSQPKSLK |
NCBI Accession | YP_009507975.1 |
---|---|
Location | 344-1129 |
Gene Name | AR1 |
Protein Name | coat protein |
Coding Region | ATGCATGCCCATTCCACGTGTAAGTCCAGAATGCCTAAGCGTGATGCGCCTTGGCGTAATAATGCGGGAACCTACAAGGTTTCCCGTTCTGGCAATTATTCTCCAGGCGGTGGAATGGGCTCAAAATCCAACAAGGCCAATGCATGGGTTAACAGGCCCATGTATAGAAAGCCAAGGATATATCGGATGTACAGAAGCCCAGACGTGCCCAAGGGATGTGAAGGACCTTGCAAGGTCCAATCATATGAACAACGCCATGATATATCTCATGTTGGTAAGGTTATGTGTATATCCGATATCACACGTGGGAATGGTATTACCCACCGTGTTGGTAAACGTTTTTGTGTGAAGTCTGTGTACATTTTAGGGAAGATATGGATGGATGAAAATATCAAGCTTAAGAACCATACTAATAGTGTTATATTTTGGTTGGTCCGTGACCGTAGACCATATGGAACCCCTATGGATTTTGGTCAAGTTTTTAATATGTTTGACAATGAACCCAGTACTGCTACGGTCAAGAACGATCTTCGTGATCGTTATCAAGTTATGCATAGGTTCAATGCAAAGGTGACTGGTGGTCAATATGCAAGCAACGAGCAAGCCTTGGTAAGGCGATTTTGGAAGGTGAACAACCATGTCGTCTATAACCACCAGGAAGCAGGAAAATACGAGAATCATACGGAGAATGCGTTATTGTTATATATGGCATGTACACATGCCTCTAATCCTGTATATGCGACATTGAAAATTCGGATCTATTTCTATGATTCGATAACCAATTAA |
Protein Sequence | MHAHSTCKSRMPKRDAPWRNNAGTYKVSRSGNYSPGGGMGSKSNKANAWVNRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | YP_009507976.1 |
---|---|
Location | 1126-1524 |
Gene Name | AL3 |
Protein Name | AL3 protein |
Coding Region | ATGGATTCACGCACAGGGGAGAACATCACTGCGCATCAGGCAGAGAATTCCGTTTTTATTTGGGAGGTACCAAATCCCCTTTATTTCAAGATCATGCGGGTGGAAGATCCAGCATACACACGGACAAGGATATACCACATCCAAGTCAGGTTCAATCACAACCTCAGGAAAGCACTGGATCTCCACAAAGCATTCCTGAACTTCCAAGTCTGGACGACATCGATTCAAGCTTCTGGGACGACATATTTAAATAGATTTAGACATTTGGTTTTATTGTATTTACATAGGTTAGGCGTAATAGGATTAAACAATGTCAATCGAGCTGTTCAGTTCGCAACAGACAAATCATATGTAAATACTGTACTTGAGAATCATGAAATAAAATATAAATTTTATTAA |
Protein Sequence | MDSRTGENITAHQAENSVFIWEVPNPLYFKIMRVEDPAYTRTRIYHIQVRFNHNLRKALDLHKAFLNFQVWTTSIQASGTTYLNRFRHLVLLYLHRLGVIGLNNVNRAVQFATDKSYVNTVLENHEIKYKFY |
NCBI Accession | YP_009507977.1 |
---|---|
Location | 1271-1789 |
Gene Name | AL2 |
Protein Name | AL2 protein |
Coding Region | ATGGAAAGCCGGTTCAAATTAAAGGAGGAATACCATCAATCGTGCTGTGCAATCCAGGTGAGGGTTCCAGTTATAAAGACTTCCTCGACAAAGAAGAAAACCGAGCTTTACACAACTGGACTATTCATAATGCGATCTTCGTCACCCTCACAGCCCCCCTCTATCAAAGCACAGCACAGGATTGCCAAACGTAAAGCCATTCGTCGACGACGCATTGACCTGAACTGCGGCTGTTCCATATTTTACCATATCAAGTGCGCAGATCATGGATTCACGCACAGGGGAGAACATCACTGCGCATCAGGCAGAGAATTCCGTTTTTATTTGGGAGGTACCAAATCCCCTTTATTTCAAGATCATGCGGGTGGAAGATCCAGCATACACACGGACAAGGATATACCACATCCAAGTCAGGTTCAATCACAACCTCAGGAAAGCACTGGATCTCCACAAAGCATTCCTGAACTTCCAAGTCTGGACGACATCGATTCAAGCTTCTGGGACGACATATTTAAATAG |
Protein Sequence | MESRFKLKEEYHQSCCAIQVRVPVIKTSSTKKKTELYTTGLFIMRSSSPSQPPSIKAQHRIAKRKAIRRRRIDLNCGCSIFYHIKCADHGFTHRGEHHCASGREFRFYLGGTKSPLFQDHAGGRSSIHTDKDIPHPSQVQSQPQESTGSPQSIPELPSLDDIDSSFWDDIFK |
1 |
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2 |
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3 |
Begomoviruses Associated with Bean Golden Mosaic Disease in Nicaragua. Karkashian J, et al. Plant Dis. 2011 Aug;95(8):901-906. doi: 10.1094/PDIS-03-10-0165. PMID: 30732116 |
4 |
Resistance to Bean Golden Mosaic Virus in Bean Genotypes. Bianchini A. Plant Dis. 1999 Jul;83(7):615-620. doi: 10.1094/PDIS.1999.83.7.615. PMID: 30845611 |
5 |
Cuban Isolate of Bean golden yellow mosaic virus is a Member of the Mesoamerican BGYMV Group. Echemendía AL, et al. Plant Dis. 2001 Sep;85(9):1030. doi: 10.1094/PDIS.2001.85.9.1030C. PMID: 30823097 |
6 |
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7 |
Macroptilium yellow mosaic virus, a New Begomovirus Infecting Macroptilium lathyroides in Cuba. Ramos PL, et al. Plant Dis. 2002 Sep;86(9):1049. doi: 10.1094/PDIS.2002.86.9.1049B. PMID: 30818538 |
8 |
Idris AM, et al. Plant Dis. 1999 Nov;83(11):1071. doi: 10.1094/PDIS.1999.83.11.1071C. PMID: 30841284 |
9 |
John P, et al. Arch Virol. 2008;153(7):1359-65. doi: 10.1007/s00705-008-0116-8. Epub 2008 May 31. PMID: 18516489 |
10 |
Recombinase polymerase amplification applied to plant virus detection and potential implications. Babu B, et al. Anal Biochem. 2018 Apr 1;546:72-77. doi: 10.1016/j.ab.2018.01.021. Epub 2018 Jan 31. PMID: 29408177 |