| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000867305.1 |
| Isolate | Mexico |
| Release date | 2015/2/13 |
| Submitter | Mauricio-Castillo,J.A., Arguello-Astorga,G.R., Mendez-Lozano,J. |
| Vector | |
| Download | Genome |GFF3 |PEP |CDS |
| NCBI Accession | YP_619876.1 |
|---|---|
| Location | 454-1224 |
| Gene Name | BV1 |
| Protein Name | nuclear shuttle protein |
| Coding Region | ATGTACCCAGTTCGTTTTAAGCGTGGTGTCTCATTTGCTGGTCGACGTAATTATTTGCGGAATAATGTCTTTAAGCGTTCAACCATCTCTAGACGAGATGACGGTAAACGACGATCTGGTAATGCCAGCAAGCTTAATAGCGAGCCCAAGATGACAGCCCAACGTATACATGAGAATCAGTTTGGGCCTGAATTTGTAATGGCCCATAATTCAGCCTTGTCTACGTTTATCAGTTATCCATGTCTTGGTAAGACAGAACCGAGTCGAAGCAGGTCTTATATCAAGTTGAAACGCTTGCGTTTCAAGGGTACTGTTAAGATTGAACGTGTTCAGTCTGATATGAACATGGATGGTGCTATTCCGAAGGTCGAAGGAGTATTTTCTCTCGTTGTTGTTGTGGATCGTAAACCCCACTTGGGTGCGTCTGGTTGTCTGCACACCTTCGACGAACTATTCGGTGCCAGGATCCATAGCCATGGAAACCTTAGCATAACCCCTTCTCTGAAAGACCGTTATTACATAAGACACGTGTTCAAACGTGTATTGTCTGTGGAGAAAGATAGTGTGATGGTTGACGTGGAAGGTTCTACTTGTCTCTCTAATAGGCGTTTCAATTGTTGGTCTACGTTTAAGGATTTGGACCGTGATTCATGTAATGGTGTTTATGCTAACATCAGCAAGAACGCCCTATTAGTATATTACTGTTGGATGTCAGATGCTGTGTCTAAGGCGTCCAGCTTTGTATCGTTCGATCTTGATTATATTGGATAA |
| Protein Sequence | MYPVRFKRGVSFAGRRNYLRNNVFKRSTISRRDDGKRRSGNASKLNSEPKMTAQRIHENQFGPEFVMAHNSALSTFISYPCLGKTEPSRSRSYIKLKRLRFKGTVKIERVQSDMNMDGAIPKVEGVFSLVVVVDRKPHLGASGCLHTFDELFGARIHSHGNLSITPSLKDRYYIRHVFKRVLSVEKDSVMVDVEGSTCLSNRRFNCWSTFKDLDRDSCNGVYANISKNALLVYYCWMSDAVSKASSFVSFDLDYIG |
| NCBI Accession | YP_619877.1 |
|---|---|
| Location | 1242-2123 |
| Gene Name | BC1 |
| Protein Name | movement protein |
| Coding Region | ATGGAATCTCAGCTAGCATTTCCTCCAAATGCTTTTAATTATATAGAATCACAGCGAGACGAGTATCAGCTTTCGCATGATCTGACTGAGATAATCCTGCAGTTTCCTTCGACGGCGTCACAGTTCACGGCGAGGCTAAATCGGAGCTGCATGAAGATCGACCACTGTGTCATAGAATACAGGCAGCAGGTTCCAATTAACGCGACGGGGACAGTGATTGTGGAGATCCATGACAAGAGAATGACGGAAAACGAGTCGTTGCAAGCGTCGTGGACTTTTCCGATCAGATGCAATATCGATCTCCACTATTTCTCGGCATCTTTCTTTTCGCTCAAAGACCCAATTCCTTGGAAACTCTATTACAGAGTTTGCGATACGAATGTTCATCAGAGGACCCATTTCGCGAAATTCAAAGGGAAATTAAAATTGTCGACGGCGAAACACTCCGTGGACATTCCGTTCAGGGCACCAACAGTAAAGATCCTATCCAAACAGTTCACCTTCAAAGATGTCGACTTTTCCCATGTGGACTACGGAAAATGGGAAAGGAAGCCCATCAGATGTGCGTCCATGTCGAGAGTTGGGTACCGCGGCCCAATTGAAATAAGGCCTGGTGAGTCATGGGCTTCCAGGAGTGCTATAGGGACTGGTCAATCAGATGCGGACTCAGAGGCAGTAAACGAATTGCACCCATACAGACACCTAAGTAGGCTGGGCTCCAGCGTATTAGACCCGGGAGAGTCTGCTTCTATAGTGGGAGCAAGGAGAGCAGAATCGAACATAACAATGTCAATGGGCCAGTTGAACGAATTAGTTAGGAATACGGTCCAAGAGTGTATTAATAGTAATTGTAAGGCTTCTAGGCCCAAATCGTTGGAATAA |
| Protein Sequence | MESQLAFPPNAFNYIESQRDEYQLSHDLTEIILQFPSTASQFTARLNRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTENESLQASWTFPIRCNIDLHYFSASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTFKDVDFSHVDYGKWERKPIRCASMSRVGYRGPIEIRPGESWASRSAIGTGQSDADSEAVNELHPYRHLSRLGSSVLDPGESASIVGARRAESNITMSMGQLNELVRNTVQECINSNCKASRPKSLE |
| NCBI Accession | YP_619885.1 |
|---|---|
| Location | 186-941 |
| Gene Name | AV1 |
| Protein Name | coat protein |
| Coding Region | ATGCCTAAGCGCGATCTCCCATGGCGCTCGATCGCGGGAACTTCGAAGGTTAGTCGCAATGCTAATTATTCTCCTCGTGCAGGAAATGGGCCCAGAAATAATAAGGCCTCGGAATGGGTGAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACTCTAAGAACGCCCGACGTGCCAAGAGGCTGTGAAGGCCCGTGTAAGGTCCAGTCCTTTGAACAGCGTCACGATATTTTACATACTGGGAGGGTAATGTGCATATCTGATGTGACACGTGGTAACGGTATCACCCATCGGGTTGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTTGGCAAGATATGGATGGATGAGAACATCAAGTTGAAGAACCACACGAACAGTGTTATGTTCTGGTTGGTCAGAGATCGTCGACCCTATGGCACGCCTATGGACTTCGGTCAGGTGTTCAACATGTTCGACAACGAGCCCAGCACTGCGACGGTGAAGAACGATCTCCGTGATCGTTATCAGGTCATGCACAAGTTCTATGGCAAGGTGACAGGTGGACAGTATGCCAGCAACGAGCAGGCTATAGTCAAACGCTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAAGAGGCTGGCAAATATGAGAATCATACAGAGAACGCTCTGTTATTGTATATGGCATGTACACATGCCTCTAATCCTGTATATGCAACGCTTAAGATTCGAATCTATTTCTACGATTCGATCATGAATTAA |
| Protein Sequence | MPKRDLPWRSIAGTSKVSRNANYSPRAGNGPRNNKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSFEQRHDILHTGRVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
| NCBI Accession | YP_619886.1 |
|---|---|
| Location | 938-1336 |
| Gene Name | AC3 |
| Protein Name | replication enhancer protein |
| Coding Region | ATGGATTCACGCACAGGGGAATTCGTCACTGCACATCAGGCAGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATGTTCCATGTAGAAGAGCCAATACATACGAGGAGCAAGGTGTACCACGTACAGATACGATTCAACCACAACCTGAGGAAAGCGTTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGTCGACCTATTTAGCTAGGTTTAGACGATTAGTTAATATGTATTTAGATGACTTAGGCGTCATTTCAATTAACAATGTAATTAGAGCTGTTCGCTTCGCAACAGACAAGTCGTACGTAAGTTATGTACTGGAATCTCATTCAATAAAATTAAAAATTTATTAA |
| Protein Sequence | MDSRTGEFVTAHQAENGVYIWEIENPLYFRMFHVEEPIHTRSKVYHVQIRFNHNLRKALDLHKAYLNFQVWTTSMTASGSTYLARFRRLVNMYLDDLGVISINNVIRAVRFATDKSYVSYVLESHSIKLKIY |
| NCBI Accession | YP_619887.1 |
|---|---|
| Location | 1083-1472 |
| Gene Name | AC2 |
| Protein Name | transactivator protein TrAP |
| Coding Region | ATGCAATCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCACACAGGCAAGCCAAGAGGAGGGCGATAAGGAGACGGCGGATTGATTTAGAGTGCGGGTGCCCCATCTACTTCCACATAGGCTGTATTGGACATGGATTCACGCACAGGGGAATTCGTCACTGCACATCAGGCAGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATGTTCCATGTAGAAGAGCCAATACATACGAGGAGCAAGGTGTACCACGTACAGATACGATTCAACCACAACCTGAGGAAAGCGTTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGTCGACCTATTTAGCTAG |
| Protein Sequence | MQSSSPSHPPSIKTAHRQAKRRAIRRRRIDLECGCPIYFHIGCIGHGFTHRGIRHCTSGREWRVYLGDRKSPLFQDVPCRRANTYEEQGVPRTDTIQPQPEESVGSPQSLPELPSLDDIDDSFWVDLFS |
| NCBI Accession | YP_619888.1 |
|---|---|
| Location | 1384-2469 |
| Gene Name | AC1 |
| Protein Name | replication protein |
| Coding Region | ATGCCACGAAAGGGTTCTTTCTCAGTAAAAGCCAGAAACTATTTCCTCACATATCCAGAGTGTTCTCTTAGCAAAGAAGAAGCACTTTCCCAATTACTAAACCTAAAAACACCAGTTAACCAGAAATTCATCAGAGTATGCAGGGAATTCCATAAGAATGGGGAGCCTCATCTCCACGTTCTCATCCAGTTCGAAGGCAAATACAACTGCACGAATAACAGATTGTTCGATCTGGTCTCCCCAACCAGGTCAACACATTTCCATCCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGAGAAGGACGGAGATACAGTTGACTGGGGAGAATTCCAGATCGACGGCAGATCTTCTAGGGGAGGTCAGCAGTCAGCTAACGATTCATATGCCAAGGCGTTGAATGCAGGATCTGTTCAAGCTGCCATGGCGGTTTTAAAAGAAGAACAGCCAAAGGATTTTGTGCTGCAAAACCATAACATACGATCCAACCTAGAGAAAATATTCGCAAAGGCTCCGGAACGATGGGTTCCTCCGTTTCAACTATCCTCGTTCACTAAAGTTCCGGACGAGATGCAAGCATGGGCGGACGAATATTTTGGAAGGGGTTCCGCTGCGCGGCCTGAGAGACCAGTAAGTATCATCATAGAAGGTGACTCGAGGACAGGGAAGACGATGTGGGCTCGTGCCTTAGGCCCACACAATTACCTTAGTGGACATCTGGACTTCAACCCAAGAGTGTACTCAAACGAAGTGGAGTATAACGTCATTGATGACGTCGCACCGCAATATCTAAAGCTAAAGCACTGGAAAGAACTTCTGGGGGCCCAGAAGGACTGGCAGTCAAATTGCAAATACGGAAAGCCAGTTCAAATTAAAGGTGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCTAGCTATAAAGATTTCCTGAACAAGGAGGAAAACACCTCCCTCAGGAACTGGACCATCAAGAATGCAATCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCACACAGGCAAGCCAAGAGGAGGGCGATAAGGAGACGGCGGATTGA |
| Protein Sequence | MPRKGSFSVKARNYFLTYPECSLSKEEALSQLLNLKTPVNQKFIRVCREFHKNGEPHLHVLIQFEGKYNCTNNRLFDLVSPTRSTHFHPNIQGAKSSSDVKSYIEKDGDTVDWGEFQIDGRSSRGGQQSANDSYAKALNAGSVQAAMAVLKEEQPKDFVLQNHNIRSNLEKIFAKAPERWVPPFQLSSFTKVPDEMQAWADEYFGRGSAARPERPVSIIIEGDSRTGKTMWARALGPHNYLSGHLDFNPRVYSNEVEYNVIDDVAPQYLKLKHWKELLGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLNKEENTSLRNWTIKNAIFITLTSALYQDSTQASQEEGDKETAD |
| NCBI Accession | YP_619889.1 |
|---|---|
| Location | 2055-2312 |
| Gene Name | AC4 |
| Protein Name | AC4 |
| Coding Region | ATGGGGAGCCTCATCTCCACGTTCTCATCCAGTTCGAAGGCAAATACAACTGCACGAATAACAGATTGTTCGATCTGGTCTCCCCAACCAGGTCAACACATTTCCATCCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGAGAAGGACGGAGATACAGTTGACTGGGGAGAATTCCAGATCGACGGCAGATCTTCTAGGGGAGGTCAGCAGTCAGCTAACGATTCATATGCCAAGGCGTTGA |
| Protein Sequence | MGSLISTFSSSSKANTTARITDCSIWSPQPGQHISIQTYRELNPAPTSSPTSRRTEIQLTGENSRSTADLLGEVSSQLTIHMPRR |
| 1 |
Collins AM, et al. Virus Genes. 2009 Dec;39(3):387-95. doi: 10.1007/s11262-009-0401-y. Epub 2009 Sep 20. PMID: 19768650 |
|---|---|
| 2 |
Mauricio-Castillo JA, et al. Arch Virol. 2014 Sep;159(9):2283-94. doi: 10.1007/s00705-014-2073-8. Epub 2014 Apr 16. PMID: 24737005 |
| 3 |
Alabi OJ, et al. Arch Virol. 2016 Jun;161(6):1729-33. doi: 10.1007/s00705-016-2821-z. Epub 2016 Mar 26. PMID: 27016928 |
| 4 |
Geminiviruses Infecting Tomato Crops in Nicaragua. Rojas A, et al. Plant Dis. 2000 Aug;84(8):843-846. doi: 10.1094/PDIS.2000.84.8.843. PMID: 30832136 |
| 5 |
First Report of a Geminivirus Inducing Yellow Mottle in Okra (Abelmoschus esculentus) in Mexico. De La Torre-Almaráz R, et al. Plant Dis. 2003 Feb;87(2):202. doi: 10.1094/PDIS.2003.87.2.202B. PMID: 30812935 |