Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000867305.1 |
Isolate | Mexico |
Release date | 2015/2/13 |
Submitter | Mauricio-Castillo,J.A., Arguello-Astorga,G.R., Mendez-Lozano,J. |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_619876.1 |
---|---|
Location | 454-1224 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTACCCAGTTCGTTTTAAGCGTGGTGTCTCATTTGCTGGTCGACGTAATTATTTGCGGAATAATGTCTTTAAGCGTTCAACCATCTCTAGACGAGATGACGGTAAACGACGATCTGGTAATGCCAGCAAGCTTAATAGCGAGCCCAAGATGACAGCCCAACGTATACATGAGAATCAGTTTGGGCCTGAATTTGTAATGGCCCATAATTCAGCCTTGTCTACGTTTATCAGTTATCCATGTCTTGGTAAGACAGAACCGAGTCGAAGCAGGTCTTATATCAAGTTGAAACGCTTGCGTTTCAAGGGTACTGTTAAGATTGAACGTGTTCAGTCTGATATGAACATGGATGGTGCTATTCCGAAGGTCGAAGGAGTATTTTCTCTCGTTGTTGTTGTGGATCGTAAACCCCACTTGGGTGCGTCTGGTTGTCTGCACACCTTCGACGAACTATTCGGTGCCAGGATCCATAGCCATGGAAACCTTAGCATAACCCCTTCTCTGAAAGACCGTTATTACATAAGACACGTGTTCAAACGTGTATTGTCTGTGGAGAAAGATAGTGTGATGGTTGACGTGGAAGGTTCTACTTGTCTCTCTAATAGGCGTTTCAATTGTTGGTCTACGTTTAAGGATTTGGACCGTGATTCATGTAATGGTGTTTATGCTAACATCAGCAAGAACGCCCTATTAGTATATTACTGTTGGATGTCAGATGCTGTGTCTAAGGCGTCCAGCTTTGTATCGTTCGATCTTGATTATATTGGATAA |
Protein Sequence | MYPVRFKRGVSFAGRRNYLRNNVFKRSTISRRDDGKRRSGNASKLNSEPKMTAQRIHENQFGPEFVMAHNSALSTFISYPCLGKTEPSRSRSYIKLKRLRFKGTVKIERVQSDMNMDGAIPKVEGVFSLVVVVDRKPHLGASGCLHTFDELFGARIHSHGNLSITPSLKDRYYIRHVFKRVLSVEKDSVMVDVEGSTCLSNRRFNCWSTFKDLDRDSCNGVYANISKNALLVYYCWMSDAVSKASSFVSFDLDYIG |
NCBI Accession | YP_619877.1 |
---|---|
Location | 1242-2123 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGGAATCTCAGCTAGCATTTCCTCCAAATGCTTTTAATTATATAGAATCACAGCGAGACGAGTATCAGCTTTCGCATGATCTGACTGAGATAATCCTGCAGTTTCCTTCGACGGCGTCACAGTTCACGGCGAGGCTAAATCGGAGCTGCATGAAGATCGACCACTGTGTCATAGAATACAGGCAGCAGGTTCCAATTAACGCGACGGGGACAGTGATTGTGGAGATCCATGACAAGAGAATGACGGAAAACGAGTCGTTGCAAGCGTCGTGGACTTTTCCGATCAGATGCAATATCGATCTCCACTATTTCTCGGCATCTTTCTTTTCGCTCAAAGACCCAATTCCTTGGAAACTCTATTACAGAGTTTGCGATACGAATGTTCATCAGAGGACCCATTTCGCGAAATTCAAAGGGAAATTAAAATTGTCGACGGCGAAACACTCCGTGGACATTCCGTTCAGGGCACCAACAGTAAAGATCCTATCCAAACAGTTCACCTTCAAAGATGTCGACTTTTCCCATGTGGACTACGGAAAATGGGAAAGGAAGCCCATCAGATGTGCGTCCATGTCGAGAGTTGGGTACCGCGGCCCAATTGAAATAAGGCCTGGTGAGTCATGGGCTTCCAGGAGTGCTATAGGGACTGGTCAATCAGATGCGGACTCAGAGGCAGTAAACGAATTGCACCCATACAGACACCTAAGTAGGCTGGGCTCCAGCGTATTAGACCCGGGAGAGTCTGCTTCTATAGTGGGAGCAAGGAGAGCAGAATCGAACATAACAATGTCAATGGGCCAGTTGAACGAATTAGTTAGGAATACGGTCCAAGAGTGTATTAATAGTAATTGTAAGGCTTCTAGGCCCAAATCGTTGGAATAA |
Protein Sequence | MESQLAFPPNAFNYIESQRDEYQLSHDLTEIILQFPSTASQFTARLNRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTENESLQASWTFPIRCNIDLHYFSASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTFKDVDFSHVDYGKWERKPIRCASMSRVGYRGPIEIRPGESWASRSAIGTGQSDADSEAVNELHPYRHLSRLGSSVLDPGESASIVGARRAESNITMSMGQLNELVRNTVQECINSNCKASRPKSLE |
NCBI Accession | YP_619885.1 |
---|---|
Location | 186-941 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGCGATCTCCCATGGCGCTCGATCGCGGGAACTTCGAAGGTTAGTCGCAATGCTAATTATTCTCCTCGTGCAGGAAATGGGCCCAGAAATAATAAGGCCTCGGAATGGGTGAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACTCTAAGAACGCCCGACGTGCCAAGAGGCTGTGAAGGCCCGTGTAAGGTCCAGTCCTTTGAACAGCGTCACGATATTTTACATACTGGGAGGGTAATGTGCATATCTGATGTGACACGTGGTAACGGTATCACCCATCGGGTTGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTTGGCAAGATATGGATGGATGAGAACATCAAGTTGAAGAACCACACGAACAGTGTTATGTTCTGGTTGGTCAGAGATCGTCGACCCTATGGCACGCCTATGGACTTCGGTCAGGTGTTCAACATGTTCGACAACGAGCCCAGCACTGCGACGGTGAAGAACGATCTCCGTGATCGTTATCAGGTCATGCACAAGTTCTATGGCAAGGTGACAGGTGGACAGTATGCCAGCAACGAGCAGGCTATAGTCAAACGCTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAAGAGGCTGGCAAATATGAGAATCATACAGAGAACGCTCTGTTATTGTATATGGCATGTACACATGCCTCTAATCCTGTATATGCAACGCTTAAGATTCGAATCTATTTCTACGATTCGATCATGAATTAA |
Protein Sequence | MPKRDLPWRSIAGTSKVSRNANYSPRAGNGPRNNKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSFEQRHDILHTGRVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession | YP_619886.1 |
---|---|
Location | 938-1336 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAATTCGTCACTGCACATCAGGCAGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATGTTCCATGTAGAAGAGCCAATACATACGAGGAGCAAGGTGTACCACGTACAGATACGATTCAACCACAACCTGAGGAAAGCGTTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGTCGACCTATTTAGCTAGGTTTAGACGATTAGTTAATATGTATTTAGATGACTTAGGCGTCATTTCAATTAACAATGTAATTAGAGCTGTTCGCTTCGCAACAGACAAGTCGTACGTAAGTTATGTACTGGAATCTCATTCAATAAAATTAAAAATTTATTAA |
Protein Sequence | MDSRTGEFVTAHQAENGVYIWEIENPLYFRMFHVEEPIHTRSKVYHVQIRFNHNLRKALDLHKAYLNFQVWTTSMTASGSTYLARFRRLVNMYLDDLGVISINNVIRAVRFATDKSYVSYVLESHSIKLKIY |
NCBI Accession | YP_619887.1 |
---|---|
Location | 1083-1472 |
Gene Name | AC2 |
Protein Name | transactivator protein TrAP |
Coding Region | ATGCAATCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCACACAGGCAAGCCAAGAGGAGGGCGATAAGGAGACGGCGGATTGATTTAGAGTGCGGGTGCCCCATCTACTTCCACATAGGCTGTATTGGACATGGATTCACGCACAGGGGAATTCGTCACTGCACATCAGGCAGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATGTTCCATGTAGAAGAGCCAATACATACGAGGAGCAAGGTGTACCACGTACAGATACGATTCAACCACAACCTGAGGAAAGCGTTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGTCGACCTATTTAGCTAG |
Protein Sequence | MQSSSPSHPPSIKTAHRQAKRRAIRRRRIDLECGCPIYFHIGCIGHGFTHRGIRHCTSGREWRVYLGDRKSPLFQDVPCRRANTYEEQGVPRTDTIQPQPEESVGSPQSLPELPSLDDIDDSFWVDLFS |
NCBI Accession | YP_619888.1 |
---|---|
Location | 1384-2469 |
Gene Name | AC1 |
Protein Name | replication protein |
Coding Region | ATGCCACGAAAGGGTTCTTTCTCAGTAAAAGCCAGAAACTATTTCCTCACATATCCAGAGTGTTCTCTTAGCAAAGAAGAAGCACTTTCCCAATTACTAAACCTAAAAACACCAGTTAACCAGAAATTCATCAGAGTATGCAGGGAATTCCATAAGAATGGGGAGCCTCATCTCCACGTTCTCATCCAGTTCGAAGGCAAATACAACTGCACGAATAACAGATTGTTCGATCTGGTCTCCCCAACCAGGTCAACACATTTCCATCCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGAGAAGGACGGAGATACAGTTGACTGGGGAGAATTCCAGATCGACGGCAGATCTTCTAGGGGAGGTCAGCAGTCAGCTAACGATTCATATGCCAAGGCGTTGAATGCAGGATCTGTTCAAGCTGCCATGGCGGTTTTAAAAGAAGAACAGCCAAAGGATTTTGTGCTGCAAAACCATAACATACGATCCAACCTAGAGAAAATATTCGCAAAGGCTCCGGAACGATGGGTTCCTCCGTTTCAACTATCCTCGTTCACTAAAGTTCCGGACGAGATGCAAGCATGGGCGGACGAATATTTTGGAAGGGGTTCCGCTGCGCGGCCTGAGAGACCAGTAAGTATCATCATAGAAGGTGACTCGAGGACAGGGAAGACGATGTGGGCTCGTGCCTTAGGCCCACACAATTACCTTAGTGGACATCTGGACTTCAACCCAAGAGTGTACTCAAACGAAGTGGAGTATAACGTCATTGATGACGTCGCACCGCAATATCTAAAGCTAAAGCACTGGAAAGAACTTCTGGGGGCCCAGAAGGACTGGCAGTCAAATTGCAAATACGGAAAGCCAGTTCAAATTAAAGGTGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCTAGCTATAAAGATTTCCTGAACAAGGAGGAAAACACCTCCCTCAGGAACTGGACCATCAAGAATGCAATCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCACACAGGCAAGCCAAGAGGAGGGCGATAAGGAGACGGCGGATTGA |
Protein Sequence | MPRKGSFSVKARNYFLTYPECSLSKEEALSQLLNLKTPVNQKFIRVCREFHKNGEPHLHVLIQFEGKYNCTNNRLFDLVSPTRSTHFHPNIQGAKSSSDVKSYIEKDGDTVDWGEFQIDGRSSRGGQQSANDSYAKALNAGSVQAAMAVLKEEQPKDFVLQNHNIRSNLEKIFAKAPERWVPPFQLSSFTKVPDEMQAWADEYFGRGSAARPERPVSIIIEGDSRTGKTMWARALGPHNYLSGHLDFNPRVYSNEVEYNVIDDVAPQYLKLKHWKELLGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLNKEENTSLRNWTIKNAIFITLTSALYQDSTQASQEEGDKETAD |
NCBI Accession | YP_619889.1 |
---|---|
Location | 2055-2312 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGGGGAGCCTCATCTCCACGTTCTCATCCAGTTCGAAGGCAAATACAACTGCACGAATAACAGATTGTTCGATCTGGTCTCCCCAACCAGGTCAACACATTTCCATCCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGAGAAGGACGGAGATACAGTTGACTGGGGAGAATTCCAGATCGACGGCAGATCTTCTAGGGGAGGTCAGCAGTCAGCTAACGATTCATATGCCAAGGCGTTGA |
Protein Sequence | MGSLISTFSSSSKANTTARITDCSIWSPQPGQHISIQTYRELNPAPTSSPTSRRTEIQLTGENSRSTADLLGEVSSQLTIHMPRR |
1 |
Collins AM, et al. Virus Genes. 2009 Dec;39(3):387-95. doi: 10.1007/s11262-009-0401-y. Epub 2009 Sep 20. PMID: 19768650 |
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2 |
Mauricio-Castillo JA, et al. Arch Virol. 2014 Sep;159(9):2283-94. doi: 10.1007/s00705-014-2073-8. Epub 2014 Apr 16. PMID: 24737005 |
3 |
Geminiviruses Infecting Tomato Crops in Nicaragua. Rojas A, et al. Plant Dis. 2000 Aug;84(8):843-846. doi: 10.1094/PDIS.2000.84.8.843. PMID: 30832136 |
4 |
First Report of a Geminivirus Inducing Yellow Mottle in Okra (Abelmoschus esculentus) in Mexico. De La Torre-Almaráz R, et al. Plant Dis. 2003 Feb;87(2):202. doi: 10.1094/PDIS.2003.87.2.202B. PMID: 30812935 |
5 |
Alabi OJ, et al. Arch Virol. 2016 Jun;161(6):1729-33. doi: 10.1007/s00705-016-2821-z. Epub 2016 Mar 26. PMID: 27016928 |