Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_003029415.1 |
Isolate | Brazil |
Release date | 2018/8/26 |
Submitter | Ferro,C.G., Silva,J.P., Xavier,C.A.D., Godinho,M.T., Lima,A.T.M., Mar,T.B., Lau,D., Zerbini,F.M. |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009508428.1 |
---|---|
Location | 199-504 |
Protein Name | AV2 protein |
Coding Region | ATGGATCAGTTATTTTGTCAGTTAGAAGGTAACAAGATAGAGCCCAAAGATCTGTTACCTGCTGTGAGTCGCTGGATCGTAGAGAAGGGAACGGCCCAGCAATTCATTGACTGGATCAATGGACTTCAGGCGGAAACGAAAGGCCTCTTTCACGCCCTTAACGCCGTACCAGATGGCGAAGAGATTCAGACAGATTCAGCAGAGGTCGACGGCGAGGAGGAGACTGAACTTCGGTTATCCCAGCCCGTACGCATCTCAGGTACCGGTAAAGAGCAGGGGTCTTACAGACAGATTCCGATTGACTAA |
Protein Sequence | MDQLFCQLEGNKIEPKDLLPAVSRWIVEKGTAQQFIDWINGLQAETKGLFHALNAVPDGEEIQTDSAEVDGEEETELRLSQPVRISGTGKEQGSYRQIPID |
NCBI Accession | YP_009508429.1 |
---|---|
Location | 317-1126 |
Protein Name | CP |
Coding Region | ATGGACTTCAGGCGGAAACGAAAGGCCTCTTTCACGCCCTTAACGCCGTACCAGATGGCGAAGAGATTCAGACAGATTCAGCAGAGGTCGACGGCGAGGAGGAGACTGAACTTCGGTTATCCCAGCCCGTACGCATCTCAGGTACCGGTAAAGAGCAGGGGTCTTACAGACAGATTCCGATTGACTAATGCCTGTAATTGCTATGGTGGTCCAACATACAAGAATAATCAGGGTCAGATGATATTGTTGCCTGCTCGCGGTCAGGGTGTTGATCAGAGGAGGGGTTCTACAATTAAAGTGTGGAGTATTAATATCAAATCTGTATGGTCTTTCACGATGCCCTCTAGTGGTAGTGGGGGTGATCTGGGAAATGTATTCTTCAGGTGGGTAATTCTTGTGGATAGGACGCCTGGGAAAGACGTTCCTTCGTGGTCCGATGTGTATCAGACGCCCAGCATTGACAGTGACACGCAGACCATGATTAACTGTCATATGAAGCAGGACTCGCTGGGCCGTTTCCAGATATTGTCCGATGTGAAGAGGTCCATGCAGCCCTTCCAAAAAGATACACATAGCAGGGATCATGTTCTTGTGGATTTGGACCTGAGGCCCAGGATGAGGAAAATGGGCCAGTATTCCGGATCGAAGAATATGAGGCCCATATTGGTAGACTATCACGCAAACAACACCTCTAACGCCTGGACCGATATTAAGAAGAATGGCCTGTTTATGTTGGCCATGGCCCATTGTGATGTAGATGGGTCATTTGTATTGGGTTCTTGTGATGTATCCGTTACTGGCTATTCATAA |
Protein Sequence | MDFRRKRKASFTPLTPYQMAKRFRQIQQRSTARRRLNFGYPSPYASQVPVKSRGLTDRFRLTNACNCYGGPTYKNNQGQMILLPARGQGVDQRRGSTIKVWSINIKSVWSFTMPSSGSGGDLGNVFFRWVILVDRTPGKDVPSWSDVYQTPSIDSDTQTMINCHMKQDSLGRFQILSDVKRSMQPFQKDTHSRDHVLVDLDLRPRMRKMGQYSGSKNMRPILVDYHANNTSNAWTDIKKNGLFMLAMAHCDVDGSFVLGSCDVSVTGYS |
NCBI Accession | YP_009508430.1 |
---|---|
Location | 1148-1546 |
Protein Name | REN |
Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCGCCTCAGGCAGAGAATGGCGTATATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCATGTAGAACACCCACCGTACACCAAGACAACAATCTACCACGTCCAAATCCGATTCAACCACAACCTGAGGAGAGCACTGGGTCTCCACAAAGCCTTTCTCAACTTCCAAGTCTGGACGACATCGATTCGAGCTTCTGGGACAACTTATTTTGCTAGATTTAAACATTTAGTTTTAATGTATTTAGAACAATTAGGGGTAATTTCAATTAACAATGTAATCCGTGCAGTATCAAATGCAACGGATAAGAAATATGTACATCATGTAATTGAATTTCATGATATAAAATTCAAATTATATTAA |
Protein Sequence | MDSRTGELITAPQAENGVYIWEITNPLYFKIYHVEHPPYTKTTIYHVQIRFNHNLRRALGLHKAFLNFQVWTTSIRASGTTYFARFKHLVLMYLEQLGVISINNVIRAVSNATDKKYVHHVIEFHDIKFKLY |
NCBI Accession | YP_009508431.1 |
---|---|
Location | 1293-1682 |
Protein Name | TRAP |
Coding Region | ATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAGCCAACGCACAGAGCAGCGAAAAGGAGAGCCAATCGCCGTAAAAGGATTGACATTAGCTGCGGGTGCTCGATATACGTCCATCTCAAGTGCAGTAACAATGGATTCACGCACAGGGGAACTCATCACTGCGCCTCAGGCAGAGAATGGCGTATATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCATGTAGAACACCCACCGTACACCAAGACAACAATCTACCACGTCCAAATCCGATTCAACCACAACCTGAGGAGAGCACTGGGTCTCCACAAAGCCTTTCTCAACTTCCAAGTCTGGACGACATCGATTCGAGCTTCTGGGACAACTTATTTTGCTAG |
Protein Sequence | MLNSSSSTPPSIKPTHRAAKRRANRRKRIDISCGCSIYVHLKCSNNGFTHRGTHHCASGREWRIYLGDNKSPVFQDIPCRTPTVHQDNNLPRPNPIQPQPEESTGSPQSLSQLPSLDDIDSSFWDNLFC |
NCBI Accession | YP_009508432.1 |
---|---|
Location | 1603-2682 |
Protein Name | Rep |
Coding Region | ATGCCATCCCAACCCAGAAAATTCCTTATTAATGCTAAAAATTATTTCCTTACTTATCCACAGTGTTCCCTTACTAAAGAGGAAACACTTTCCCAAATTCTAAACATCCAAACACCCACAAATAAGAAGTTCATCAAGATAGCAAGAGAATTACACGAGAATGGGGAACCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAGTTCAAAACCCAGAATTGCCGATTCTTCGACCTGGTTTCCCCAACCAGGTCAGTACATTTCCATCCAAACATTCAGGGAGCTAAATCAAGCTCAGACGTCAAGACCTACGTCGAGAAGGACGGAGACACCATCGAATGGGGAGAATTCCAGATCGACGCAAGAAGTGCTAGAGGAGGTCAGCAGACGGCTAACGAGTCTTACGCCAAGGTCCTAAATGCATCATCCATCACAGAAGCACTTCAAATTCTAAAGGAGGAACAACCAAAGGACTTTGTCCTTCAACATCACAACATACGCTCCAATCTAGAGCGTATCTTTCAGAAGGCTCCGGAGCCATGGACTCCTCCGTTTCCCCTCTCCTCCTTTAACGCCGTACCGGAGGAGATGCAGGAATGGGCTGATGAGTATTTCGGTGTCGATCGCGCTGCGCGGCCGGAAAGACCTGTTAGTATCATCATTGAAGGTGATTCGAGGACGGGGAAGACAATGTGGGCTAGGTCTTTAGGGTCCCACAACTATTTGAGTGGACACCTAGATTTCAATTCTAGGGTTTATTCCAATGAGGCGGAGTACAACGTCATGGATGACATCACTCCGCAATACCTAAAGTTAAAGCACTGGAAAGAGCTCATCGGGGCCCAAAGGGACTGGCAGTCCAACTGCAAATACGGGAAGCCAGTTCAAATTAAAGGCGGTATACCATCAATCGTGCTCTGCAATCCAGGAGAGGGGGCCAGCTATAAAGATTACCTCGACAAAGAGGAAAATGCATCCCTAAGAGCGTGGACACTCCACAATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAGCCAACGCACAGAGCAGCGAAAAGGAGAGCCAATCGCCGTAA |
Protein Sequence | MPSQPRKFLINAKNYFLTYPQCSLTKEETLSQILNIQTPTNKKFIKIARELHENGEPHLHVLIQFEGKFKTQNCRFFDLVSPTRSVHFHPNIQGAKSSSDVKTYVEKDGDTIEWGEFQIDARSARGGQQTANESYAKVLNASSITEALQILKEEQPKDFVLQHHNIRSNLERIFQKAPEPWTPPFPLSSFNAVPEEMQEWADEYFGVDRAARPERPVSIIIEGDSRTGKTMWARSLGSHNYLSGHLDFNSRVYSNEAEYNVMDDITPQYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDYLDKEENASLRAWTLHNAKFIFLDSPLYQANAQSSEKESQSP |
NCBI Accession | YP_009508433.1 |
---|---|
Location | 2265-2522 |
Protein Name | AC4 protein |
Coding Region | ATGGGGAACCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAGTTCAAAACCCAGAATTGCCGATTCTTCGACCTGGTTTCCCCAACCAGGTCAGTACATTTCCATCCAAACATTCAGGGAGCTAAATCAAGCTCAGACGTCAAGACCTACGTCGAGAAGGACGGAGACACCATCGAATGGGGAGAATTCCAGATCGACGCAAGAAGTGCTAGAGGAGGTCAGCAGACGGCTAACGAGTCTTACGCCAAGGTCCTAA |
Protein Sequence | MGNLISTCLSNSKASSKPRIADSSTWFPQPGQYISIQTFRELNQAQTSRPTSRRTETPSNGENSRSTQEVLEEVSRRLTSLTPRS |
1 |
Characterization of sida golden mottle virus isolated from Sida santaremensis Monteiro in Florida. Al-Aqeel HA, et al. Arch Virol. 2018 Oct;163(10):2907-2911. doi: 10.1007/s00705-018-3903-x. Epub 2018 Jun 21. PMID: 29931396 |
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2 |
Andrade EC, et al. J Gen Virol. 2006 Dec;87(Pt 12):3687-3696. doi: 10.1099/vir.0.82279-0. PMID: 17098986 |
3 |
Bornancini VA, et al. Viruses. 2020 Feb 11;12(2):202. doi: 10.3390/v12020202. PMID: 32054104 |
4 |
Hernández-Zepeda C, et al. Virus Genes. 2007 Dec;35(3):825-33. doi: 10.1007/s11262-007-0149-1. Epub 2007 Aug 8. PMID: 17682933 |
5 |
Fiallo-Olivé E, et al. Arch Virol. 2012 Jan;157(1):141-6. doi: 10.1007/s00705-011-1123-8. Epub 2011 Oct 1. PMID: 21964921 |