Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000841845.1 |
Release date | 2015/2/12 |
Submitter | Gilbertson,R.L., Faria,J.C., Hanson,S.F., Morales,F.J., Ahlquist,P.G., Maxwell,D.P., Russell,D.R., Hidayat,S.H., Martinez,R.T., Leong,S.A. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_660081.1 |
---|---|
Location | 1556-2617,1-24 |
Gene Name | AL1 |
Protein Name | putative replicative protein |
Coding Region | ATGCCACCACCAAAGCGTTTTAAAATAAACGCAAAGAATTATTTCCTCACATACCCACAATGTTCAATTACAAAAGAGAGTGCAATTGAACAACTTCAAAACCTACAAACACCGGTGAACAAGAAATACATCAGAATTTGCAGAGAAATTCACGAGAATGGGGAACCACATCTGCATGCTCTTATCCAATTCGAAGGCAAGTTCCAGTGCACGAATTGCAGAGTGTTCGACCTCAAACACCCAACAACATCTTCCGTCTCCCATGCCAATATACAGAGTGCAAAATCATCCTCTGATGTCAAGTCCTACATCGAGAAAGACGGTGATTACATCGAATGGGGTCATTTTCAAGTCGACGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCGGCATCCGAAGCATTGAATGCTTCTTCAAAGGAAGAAGCCATGCAAATAATCAAAGAGAAACTACCGGAAAAGTTTCTCTTCCAATATCACAATTTATCCAGTAACCTGGATAGAATATTCACAAAAGCTCCGGATCCGTGGTCACCTCCGTATCACCTCTCCTCTTTTACTAACGTACCGAGAGAGATGCAAGAATGGGCAGATGATTATTTCGGGAGAGGTGCCGCTGCGCGGCCGGAGAGACCTATTAGTATCATCATCGAAGGTGATTCACGAACGGGGAAGACAATGTGGGCACGTGCATTAGGGACCCACAATTATTTAAGTGGTCACCTGGATTTCAACTCAAAGGTGTTTTCAAATCATGCTGAGTATAACGTCATTGATGACATCGCACCGCACTATCTAAAGTTAAAGCACTGGAAGGAATTGATGGGAGCTCAAAAGGACTGGCAATCAAACTGCAAATACGGGAAACCCGTTCAAATTAAAGGTGGAATCCCATCAATCGTGCTTTGCAATCCAGGTGAAGGAGCCAGTTATAAATGTTTCCTCGACAAAGAGGAAAACGCAGCTCTTAAAAACTGGACAATCCATAATGCGAAATTCATCTTCCTCAACTCCCCCCTCTATCAAAGTTCAACACAGAGCTGCGAAGAAACGAGCAATCAGACGACGTCGCGTTGA |
Protein Sequence | MPPPKRFKINAKNYFLTYPQCSITKESAIEQLQNLQTPVNKKYIRICREIHENGEPHLHALIQFEGKFQCTNCRVFDLKHPTTSSVSHANIQSAKSSSDVKSYIEKDGDYIEWGHFQVDGRSARGGQQTANDAASEALNASSKEEAMQIIKEKLPEKFLFQYHNLSSNLDRIFTKAPDPWSPPYHLSSFTNVPREMQEWADDYFGRGAAARPERPISIIIEGDSRTGKTMWARALGTHNYLSGHLDFNSKVFSNHAEYNVIDDIAPHYLKLKHWKELMGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKCFLDKEENAALKNWTIHNAKFIFLNSPLYQSSTQSCEETSNQTTSR |
NCBI Accession | NP_660082.1 |
---|---|
Location | 358-1113 |
Gene Name | AR1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGTGATGCTCAATGGCGCCATATGGGAGGTACGTCAAAAATTAGCCGTTCTGCTAATTTTTCTCCTCGTGGGGGTAATGGGCCTAAATACAACAAGGCCGCCGAATGGGTAAATAGGCCTATGTACAGGAAGCCCAGGATATATCGAACGTTACGAGGCCCTGACGTTCCACGGGGCTGTGAAGGCCCGTGTAAGGTACAGTCCTATGAACAACGACATGATGTCTCTCATGTTGGGAAGGTTATGTGTGTATCTGATGTGACGAGAGGTAATGGTATTACCCATCGTGTAGGAAAACGTTTTTGTGTTAAGTCTGTTTATATTTTAGGTAAGATATGGATGGACGAAAATATCAAGTTGAAGAATCACACGAACAGTGTGATGTTTTGGTTAGTGAGAGATCGTAGACCGTATGGTACTCCTATGGACTTTGGTCAAGTTTTTAATATGTTTGACAATGAACCCAGTACTGCTACTGTTAAGAACGATCTTCGTGATCGTTTTCAAGTTATGCATAAGTTCTATGGAAAGGTAACAGGTGGACAATATGCTAGCAACGAGCAGGCATTGGTCAAGCGTTTTTGGAAGGTGAATAACTATGTAGTTTACAATCATCAAGAAGCAGGGAAGTACGAGAATCATACGGAGAACGCTTTATTATTGTATATGGCATGTACTCATGCCTCAAATCCCGTGTATGCTACTCTAAAAATTCGGATCTATTTTTATGATTCGATCACCAATTAA |
Protein Sequence | MPKRDAQWRHMGGTSKISRSANFSPRGGNGPKYNKAAEWVNRPMYRKPRIYRTLRGPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | NP_660083.1 |
---|---|
Location | 1110-1508 |
Gene Name | AL3 |
Protein Name | AL3 protein |
Coding Region | ATGGATTCACGCACAGGGGAACGCATCACTGCACGTCAAGCGGAGAATGGCGTGTATATCTGGGAGATATCAAATCCCCTTTATTTCAAGATGTACAACGTAGAGGATCTACAATACACAACGACCAGAGTATACCACCTCCAAATACGGTTCAACCACAACCTCAGGAACAAACTGGGTCTACACAAGGCTTTCCTGAATTTCCAAGTCTGGACGATATCTCTTCAAGCTTCTGGGACGACATATTTAAATAGATTTAAATATTTAGTGCTATTGTATTTAGATAGAATAGGTGTCATTTCGCTTAACAATGTAATCAGAGCTGTACGTTTCGCAACAGATAAATCATATGTAAATTATGTACTTGAGAATCATGAAATAAAATATAAATTTTATTAA |
Protein Sequence | MDSRTGERITARQAENGVYIWEISNPLYFKMYNVEDLQYTTTRVYHLQIRFNHNLRNKLGLHKAFLNFQVWTISLQASGTTYLNRFKYLVLLYLDRIGVISLNNVIRAVRFATDKSYVNYVLENHEIKYKFY |
NCBI Accession | NP_660084.1 |
---|---|
Location | 1255-1644 |
Gene Name | AL2 |
Protein Name | AL2 protein |
Coding Region | ATGCGAAATTCATCTTCCTCAACTCCCCCCTCTATCAAAGTTCAACACAGAGCTGCGAAGAAACGAGCAATCAGACGACGTCGCGTTGATTTAGAGTGCGGCTGCACAATTTACGTACACATAAATTGCTCAGGACATGGATTCACGCACAGGGGAACGCATCACTGCACGTCAAGCGGAGAATGGCGTGTATATCTGGGAGATATCAAATCCCCTTTATTTCAAGATGTACAACGTAGAGGATCTACAATACACAACGACCAGAGTATACCACCTCCAAATACGGTTCAACCACAACCTCAGGAACAAACTGGGTCTACACAAGGCTTTCCTGAATTTCCAAGTCTGGACGATATCTCTTCAAGCTTCTGGGACGACATATTTAAATAG |
Protein Sequence | MRNSSSSTPPSIKVQHRAAKKRAIRRRRVDLECGCTIYVHINCSGHGFTHRGTHHCTSSGEWRVYLGDIKSPLFQDVQRRGSTIHNDQSIPPPNTVQPQPQEQTGSTQGFPEFPSLDDISSSFWDDIFK |
NCBI Accession | NP_660085.1 |
---|---|
Location | 558-1319 |
Gene Name | BR1 |
Protein Name | BR1 protein |
Coding Region | ATGTATTTTTCGCGAAACAAACGTGGTGCCACTACTACTTCGAGACGAAGCTATTCAAGGTATCCCTTGTCTAGGCGTTCGTATAGTGTGAATAGAATCAATGGCAAACGTGGATCGAATATTCATAGAAAGGCCCATGATGATGGTAAAATGTTAGCCCAACGTTTACATGAGAATCAGTTTGGGCCTGAATTTGTCATGGCCCATAATTCAGCGATATCAACGTTTATTAATTTCCCTAGTCTTGGTAAGACTGAACCGAATCGATCAAAGAGCTTTATTAAGTTAAAACGTTTACGTTTTAAGGGTACTGTTAAAATTGAACGTGTTTTGAATATGGATGGTTCAACTCCTAAGATTGAAGGCGTATTTTCCATGGTCCTTGTTGTTGACCGAAAACCTCACTTGGGATCATCTGGATGTCTCCATACATTTGATGAATTGTTCGGTGCAAGGATTCATAGTCACGGTAATTTAGCCATTACTGCCACATTGAAAGAGCGATTCTATATACGTCATGTTTATAAGCGTGTGCTTTCAGTTGAGAAGGATAGCATGATGGTCGACGTCGAAGGAAGCACATACTTATCTAGTAGGCGTTTTAATTGTTGGGCTACATTTAAAGATGATGAACGTGACTCTTGTAATGGCGTTTATGCTAACATAAGCAAGAATGCTCTTTTAGTCTATTATTGTTGGATGTCGGATGCTATGTCCAAGGCATCTACGTTTGTATCATTTGATCTTGATTATGTTGGATGA |
Protein Sequence | MYFSRNKRGATTTSRRSYSRYPLSRRSYSVNRINGKRGSNIHRKAHDDGKMLAQRLHENQFGPEFVMAHNSAISTFINFPSLGKTEPNRSKSFIKLKRLRFKGTVKIERVLNMDGSTPKIEGVFSMVLVVDRKPHLGSSGCLHTFDELFGARIHSHGNLAITATLKERFYIRHVYKRVLSVEKDSMMVDVEGSTYLSSRRFNCWATFKDDERDSCNGVYANISKNALLVYYCWMSDAMSKASTFVSFDLDYVG |
NCBI Accession | NP_660086.1 |
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Location | 1391-2272 |
Gene Name | BL1 |
Protein Name | BL1 protein |
Coding Region | ATGGAGTCTCAATTAGTTAATCCACCAACAGCGTTCAATTATGTAGAATCTAACCGTGATGAATATCAACTGTCTCATGACTTGAATGAGATAGTATTACAATTTCCTTCAACAACAGCTCAAATAAGCGCCAGATTAAGTCGAAGCTGTATGAAGATAGATCATTGCGTCATTGAATACAGGCAACAAGTTCCTATCAACGCAACAGGAACTGTGATTGTGGAGATTCACGACAAAAGAATGACGGATAATGAGTCATTACAAGCATCATGGACATATCCCATAAGGTGTAACATAGATCTCCACTTTTTTTCATCTTCATTCTTCTCCCTTAAAGACCCAATTCCCTGGAAATTGTATTACAGAGTTAGCGACACAAATGTTCATCAACGAACACACTTCGCAAAATTTAAGGGGAAACTGAAGATATCCACTGCGAAACATTCGGTGGATATTCCTTTCAAGCCCCCAACCGTGAAAATATTATCTACACAATTCACTGAGAAAGATGTGGATTTCTCCCACGTTGGTTACGGGAAATGGGAGAGGAAATTAATAAAGTCCGCATCCACATCTCGATATGGGCTTCACAGCCCAATTACATTAAAACCCGGTGAGACATGGGCAACAAGAAGTACAATAGGAACCGGTACTTCAGATGCGGACTCTGAATTAGACAACGCAGTACATCCATATAGACAACTTCATAGATTGGACACAAGTATTCTAGACCCTGGAGATTCCGCATCTATAGTTGGAGCGCGAAGAACCGAGTCAAGTATCACCCTTTCAATGGCCCAATTAAACGAATTGGTTAAAACTGCGGCCCAAGAATGTATTAACAGTAATTGTACTCCTGCTCAACCAAAGTCGTTGAAATAA |
Protein Sequence | MESQLVNPPTAFNYVESNRDEYQLSHDLNEIVLQFPSTTAQISARLSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTYPIRCNIDLHFFSSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKISTAKHSVDIPFKPPTVKILSTQFTEKDVDFSHVGYGKWERKLIKSASTSRYGLHSPITLKPGETWATRSTIGTGTSDADSELDNAVHPYRQLHRLDTSILDPGDSASIVGARRTESSITLSMAQLNELVKTAAQECINSNCTPAQPKSLK |
1 |
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2 |
Resistance to Bean Golden Mosaic Virus in Bean Genotypes. Bianchini A. Plant Dis. 1999 Jul;83(7):615-620. doi: 10.1094/PDIS.1999.83.7.615. PMID: 30845611 |
3 |
Bonfim K, et al. Mol Plant Microbe Interact. 2007 Jun;20(6):717-26. doi: 10.1094/MPMI-20-6-0717. PMID: 17555279 |
4 |
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5 |
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6 |
de Paula NT, et al. Virus Res. 2015 Dec 2;210:245-7. doi: 10.1016/j.virusres.2015.08.012. Epub 2015 Aug 18. PMID: 26297125 |
7 |
Nucleotide sequence of bean golden mosaic virus and a model for gene regulation in geminiviruses. Howarth AJ, et al. Proc Natl Acad Sci U S A. 1985 Jun;82(11):3572-6. doi: 10.1073/pnas.82.11.3572. PMID: 16593562 |
8 |
The composition of bean golden mosaic virus and its single-stranded DNA genome. Goodman RM, et al. Virology. 1980 Oct 15;106(1):168-72. doi: 10.1016/0042-6822(80)90236-6. PMID: 18631717 |
9 |
First Report and Characterization of Rhynchosia golden mosaic virus in Honduras. Potter JL, et al. Plant Dis. 2000 Sep;84(9):1045. doi: 10.1094/PDIS.2000.84.9.1045A. PMID: 30832009 |
10 |
Hung HC, et al. J Gen Virol. 2001 Mar;82(Pt 3):667-672. doi: 10.1099/0022-1317-82-3-667. PMID: 11172109 |