Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000840525.1 |
Release date | 2015/2/12 |
Submitter | Hofer,P., Engel,M., Jeske,H., Frischmuth,T., Hoefer,P. |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_808891.1 |
---|---|
Location | 333-1088 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGCGATGTCCCATGGCGCAATATAGCGGGCACCTCAAAGGTTAGCCGCTCGTCGAATGACTCCCCTCGTGCAGGCAGTGGGCCAAAATTTTATAAGGCCGCGAGATGGGTTGACAGGCCCATGTATAGGAAGCCCAGGATTTATCGGATCCTCCGCACGCCCGACGTTCCCAGAGGATGTGAAGGCCCTTGCAAGGTCCAATCCTATGAGCAGCGTCATGATATCTCACACGTGGGTAAGGTAATGTGTATATCTGATGTCACACGCGGTAATGGTATCACCCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATTCTAGGGAAGATCTGGATGGATGAGAATATTAAGCTGAAGAACCACACGAATAGTGTTATGTTCTGGTTGGTCAGGGACCGTAGACCCTATGGCACGCCTATGGACTTTGGCCAGGTGTTCAACATGTTCGATAATGAGCCCAGTACTGCCACTGTGAAGAACGATCTAAGGGATCGTTACCAGGTCATGCACAAGTTCTACGCCAAGGTTACTGGTGGACAGTACGCGAGTAACGAGCAAGCCTTGGTGAAGAGATTCTGGAAGGTCAACAATCATGTGGTCTACAACCACCAGGAAGCTGGAAAGTACGAGAATCACACCGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCAGTGTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAATGAATTAA |
Protein Sequence | MPKRDVPWRNIAGTSKVSRSSNDSPRAGSGPKFYKAARWVDRPMYRKPRIYRILRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession | NP_808909.1 |
---|---|
Location | 1085-1483 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCACCTCATTCAGAGAATGGCGTTTATATCTGGGAGATAGAAAATCCCCTCTATTTCAAGATATACAAGGTAGAGGATCCACCGTTCACGAACACCAGGATATACAGTATCCAAATCCGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCGTACCTGAACTTCCAAGTCTGGACGACATCCCTGACAGCTTCTGGGTCGACTTATTTAAGTAGGTTTAGACGTTTAGTTCATATGTATTTAGATCAATTAGGTGTGATTTCACTTAACAATGTAATTAGAGCTGTTCGTTTCGCAACAGACCGATCATATGTAAATTATGTACTCCAAGATCATTCAATAAAATTCATAATTTATTAA |
Protein Sequence | MDSRTGELITAPHSENGVYIWEIENPLYFKIYKVEDPPFTNTRIYSIQIRFNHNLRRALHLHKAYLNFQVWTTSLTASGSTYLSRFRRLVHMYLDQLGVISLNNVIRAVRFATDRSYVNYVLQDHSIKFIIY |
NCBI Accession | NP_808910.1 |
---|---|
Location | 1230-1694 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | CTGGTGAGGGTGCCAGTTATAAAGATTTCCTGGACAAAGAGGAGAACACAGCACTCAAAAACTGGACCCTCAAGAATGCGGTCTTCATCACCATCGACTCCCCCCTCTATCAAGAAGACACACAGGCAAGCCAAGAAGAGGTCGGTCAGGCGACGCCGCATTGATTTAGAGTGCGGGTGCTCCATATACTTCCATATCGGCTGTACGGGCCATGGATTCACGCACAGGGGAACTCATCACTGCACCTCATTCAGAGAATGGCGTTTATATCTGGGAGATAGAAAATCCCCTCTATTTCAAGATATACAAGGTAGAGGATCCACCGTTCACGAACACCAGGATATACAGTATCCAAATCCGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCGTACCTGAACTTCCAAGTCTGGACGACATCCCTGACAGCTTCTGGGTCGACTTATTTAAGTAG |
Protein Sequence | MVRVPVIKISWTKRRTQHSKTGPSRMRSSSPSTPPSIKKTHRQAKKRSVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSFREWRLYLGDRKSPLFQDIQGRGSTVHEHQDIQYPNPVQPQPEESVASPQSVPELPSLDDIPDSFWVDLFK |
NCBI Accession | NP_808911.1 |
---|---|
Location | 1531-2469 |
Gene Name | AC1 |
Protein Name | AC1 protein |
Coding Region | TTGCACGAAGATGGGCAACCTCATCTGCATGTGCTTATCCAATTCGAAGGGAAATACCAATGCACGAATCAGAGATTCTTCGATCTGGTGTCCCCAACCAGGTCAGTACATTTCCATCCGAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGCGACACCGTTGAGTGGTGGGAGTTTCAAATCGACGGTAGGTCTGCTAGAGGAGGCCAGCAATCGGCTAACGACTCATATGCCAAGGCGTTAAATGCATCGTCGGCGGAGGAAGCTCTACGGATAATCAAGGAAGAACAACCCCAACATTTCTTCCTTCAACATCACAACCTGGTTGCAAACGCAACCAGAATATTTCAAAAGGCTCCGTCACCGTGGGCTCCTCCGTTTCCCCTCTCCTCGTTCACTAACGTTCCAGAGCAGATGCAAGTATGGGCAGATCATTATTTTGGAAGAGGTTCCGCTGCGCGCCCAGATAGACCAGTAAGTCTCATAGTAGAAGGTGATTCAAGAACAGGGAAGACGATGTGGGCTCGGGCATTAGGCCCACATAATTATCTTAGTGGACACCTAGACTTCAATTCCAGAGTGTTCTCAAACGAAGTGGAATATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGTTAAAGCACTGGAAAGAATTAATCGGGTCCCAAAGGGACTGGCAGTCAAATTGCAAATACGGCAAGCCAGTTCAAATTAAAGGAGGAATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCCAGTTATAAAGATTTCCTGGACAAAGAGGAGAACACAGCACTCAAAAACTGGACCCTCAAGAATGCGGTCTTCATCACCATCGACTCCCCCCTCTATCAAGAAGACACACAGGCAAGCCAAGAAGAGGTCGGTCAGGCGACGCCGCATTGA |
Protein Sequence | MHEDGQPHLHVLIQFEGKYQCTNQRFFDLVSPTRSVHFHPNIQGAKSSSDVKSYIDKDGDTVEWWEFQIDGRSARGGQQSANDSYAKALNASSAEEALRIIKEEQPQHFFLQHHNLVANATRIFQKAPSPWAPPFPLSSFTNVPEQMQVWADHYFGRGSAARPDRPVSLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVFSNEVEYNVIDDVAPHYLKLKHWKELIGSQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENTALKNWTLKNAVFITIDSPLYQEDTQASQEEVGQATPH |
NCBI Accession | NP_808912.1 |
---|---|
Location | 2202-2459 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGCAACCTCATCTGCATGTGCTTATCCAATTCGAAGGGAAATACCAATGCACGAATCAGAGATTCTTCGATCTGGTGTCCCCAACCAGGTCAGTACATTTCCATCCGAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGCGACACCGTTGAGTGGTGGGAGTTTCAAATCGACGGTAGGTCTGCTAGAGGAGGCCAGCAATCGGCTAACGACTCATATGCCAAGGCGTTAA |
Protein Sequence | MGNLICMCLSNSKGNTNARIRDSSIWCPQPGQYISIRTYRELNQAPTSSPTSTRTATPLSGGSFKSTVGLLEEASNRLTTHMPRR |
NCBI Accession | NP_808892.1 |
---|---|
Location | 593-1363 |
Gene Name | BV1 |
Protein Name | BV1 protein |
Coding Region | ATGTATCCTTACAGGTATAAGCGTGGTCCCTCGTTCGCTGCACGACGATCTTATACACGTAATTATGCGTTTAAGCGTCCTACTAATTCCAAACGAGATGATGGGAAACGTAGGCCTGTTAACAATAATAAGGCCCATGATGAACCCAAGATGTCAGCCCAGCGGATGCACGAGAATCAGTTCGGTCCGGACTTTGTTATGGCCCATAATTCAGCCATTTCAACGTTCATCAGTTACCCCAGTCTTTGTAAGACTGAACCGAATCGGAGCAGGTCCTATATCAAGTTGAAACGACTGCGTTTCAAAGGCACTGTGAAGATTGAACGTGTTCAGGCAGATGTTAGCATGGACGGTGCTATCCCTAAAGTGGAAGGTGTGTTCTCCTTCGTTATTGTTGTGGATCGTAAACCACACTTGGGTACCTCTGGTTGTCTCCACACGTTCGACGAGCTCTTCGGTGCTAGGATCCACAGCCATGGTAACCTGAGCATAACCCCTTCATTGAAAGAGCGGTTCTACATAAGACACGTGTTCAAACGTGTATTGTCTGTGGAGAAGGATACGTTAATGGTTGACGTGGAAGGGTCCACTACGCTCTCTAACAGACGCTATAATTGTTGGTCTACGTTTAAGGATCTAGATCGTGACTCGTGTAATGGTGTCTATGGCAATATTAGCAAGAACGCCGTCTTAGTTTATTATTGTTGGATGTCAGATGCTATGTCCAAGGCATCTACATTTGTATCGTTTGACCTTGACTATGTTGGATGA |
Protein Sequence | MYPYRYKRGPSFAARRSYTRNYAFKRPTNSKRDDGKRRPVNNNKAHDEPKMSAQRMHENQFGPDFVMAHNSAISTFISYPSLCKTEPNRSRSYIKLKRLRFKGTVKIERVQADVSMDGAIPKVEGVFSFVIVVDRKPHLGTSGCLHTFDELFGARIHSHGNLSITPSLKERFYIRHVFKRVLSVEKDTLMVDVEGSTTLSNRRYNCWSTFKDLDRDSCNGVYGNISKNAVLVYYCWMSDAMSKASTFVSFDLDYVG |
NCBI Accession | NP_808913.1 |
---|---|
Location | 1387-2289 |
Gene Name | BC1 |
Protein Name | BC1 protein |
Coding Region | CTGCGCGCCTTTCTTTACCATATGGATTCTCAGTTAGTTAATCCTCCAAACGCCTTTAACTACATGGAGTCTCACAGAGAAGAATATCAGCTTTCCCATGACCTAACTGAGATATTTCTGCAATTTCCATCGACGGCGTCTCAGTTAACGGCGAGATTCAGCCGGAGCTGCATGAAGATTGACCATTGCGTCATAGAGTACAGGCAACAGGTGCCGATTAACGCCACCGGGTCGGTAATCGTGGAGATACACGACAAGAGGATGACGGACAACGAATCCTTACAGGCGTCATGGACTTTTCCGATCAGATGCAACATAGATCTCCACTACTTCTCAGCTTCCTTTTTCTCTCTCAAGGACCCAATTCCATGGAAACTGTATTACAAAGTTTCCGATACCAATGTTCATCAGAGGACCCACTTCGCCAAGTTCAAGGGGAAGCTGAAGCTGTCGACGGCGAAACACTCGGTGGATATACCATTCCGGGCACCGACAGTCAGGATCCTGTCCAAACAGTTCACCGACAAGGATGTGGACTTCTCCCACGTCGACTACGGAAGATGGGAAAGGAAGCCCATCAGATGCGCCTCCATGTCCAGGGTTGGGCTCAGAGGCCCACTTGAGATCAAGCCCGGTGAATCGTGGGCTTCCAGGAGTGCGGTGGGAACGGGGCATTCAGATGCGGACTCCGAGGTGGAAAACGAGTTGCATCCTTACAGGCACCTAAGTAGGCTGGGGACCAGCGTTTTGGATCCGGGAGAGTCTGCTTCAATAGTAGGAGCCCAGAGAGCAGAATCCAATATAACAATGTCAATGGGCCAATTAAACGAGCTAGTTAGGACTACGGTCCAAGAATGTATTAACAGTAATTGTAAACCGTCACAGCCCAAATCATTGCAATAA |
Protein Sequence | MRAFLYHMDSQLVNPPNAFNYMESHREEYQLSHDLTEIFLQFPSTASQLTARFSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSASFFSLKDPIPWKLYYKVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVRILSKQFTDKDVDFSHVDYGRWERKPIRCASMSRVGLRGPLEIKPGESWASRSAVGTGHSDADSEVENELHPYRHLSRLGTSVLDPGESASIVGAQRAESNITMSMGQLNELVRTTVQECINSNCKPSQPKSLQ |
1 |
Höfer P, et al. J Gen Virol. 1997 Jul;78 ( Pt 7):1785-90. doi: 10.1099/0022-1317-78-7-1785. PMID: 9225056 |
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2 |
Graham AP, et al. Virus Genes. 2010 Apr;40(2):256-66. doi: 10.1007/s11262-009-0430-6. Epub 2009 Dec 19. PMID: 20024609 |
3 |
Unseld S, et al. Virology. 2000 Aug 15;274(1):179-88. doi: 10.1006/viro.2000.0454. PMID: 10936098 |
4 |
Höhnle M, et al. Virology. 2001 Nov 10;290(1):164-71. doi: 10.1006/viro.2001.1140. PMID: 11883001 |
5 |
Frischmuth T, et al. J Gen Virol. 1997 Oct;78 ( Pt 10):2675-82. doi: 10.1099/0022-1317-78-10-2675. PMID: 9349490 |