Genus | Begomovirus |
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NCBI Assembly | GCF_001777265.1 |
Isolate | Brazil |
Release date | 2016/10/19 |
Submitter | Passos,L.S., Teixeira,J.W.M., Lima,K.J., Rodrigues,J.S., Soares,E.C.S., Xavier,C.A.D., Araujo,A.S.F., Zerbini,F.M., Beserra,J.E.A. Jr. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009310075.1 |
---|---|
Location | 378-1148 |
Gene Name | NSP |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTACTCGGTTAAATATAGACGTGGATCGTCCTATACTCAGCGACGAGGTTATTCAAGGAAGACGGTATTTAGACGATCGTATGGTGTTAAACGAAGCGATGATAAGCGACGTGCGAGTCAATCGTCAAAGGGTCACGATGATGGGAAGATTTCAGCCCAACGGATACATGAGAACCAGTTTGGGCCTGAATTTGTTATGGCCCATAATTCAGCCATATCAACGTTCATTAGCTTCCCCAATCTCGGGAAGACCGAACCGAACCGGTCAAGGTCCTATATTAAGTTGAAACGGTTACGTTTCAAGGGTACTGTGAAGATCGAACGTGTTCATGCCGATGTCAACATGGACGGTTCAACCCCAAAGACCGAAGGAGTCTTCTCTCTTGTTGTCGTTGTCGACCGTAAACCTCATCTGAGCTCGTCTGGATGTCTGCACACATTTGACGAGTTATTCGGTGCAAGGATCCACAGCCATGGTAATTTAGCGATCGCACCGTCGTTGAAGGATCGTTTCTACATAAGGCACGTGTCGAAACATGTGTTATCGGCAGAGAAAGACACGATGATGGTGGACCTGGAGGGAGCGACGTGGTTGTCTAACAGGCGTTTTAATTGTTGGTCTAGTTTTAAGGACCTTGATCATGACACGTGTAATGGGGTTTATGCGAACATTAGCAAGAACGCCCTGTTAGTTTATTACTGCTGGATGTCGGATATTATGTCCAAGGCATCGACATTTGTATCGTTTGATCTCGACTATGTCGGGTGA |
Protein Sequence | MYSVKYRRGSSYTQRRGYSRKTVFRRSYGVKRSDDKRRASQSSKGHDDGKISAQRIHENQFGPEFVMAHNSAISTFISFPNLGKTEPNRSRSYIKLKRLRFKGTVKIERVHADVNMDGSTPKTEGVFSLVVVVDRKPHLSSSGCLHTFDELFGARIHSHGNLAIAPSLKDRFYIRHVSKHVLSAEKDTMMVDLEGATWLSNRRFNCWSSFKDLDHDTCNGVYANISKNALLVYYCWMSDIMSKASTFVSFDLDYVG |
NCBI Accession | YP_009310076.1 |
---|---|
Location | 1219-2100 |
Gene Name | MP |
Protein Name | movement protein |
Coding Region | ATGGAATCTCAGCTGATGAATGCTCCCAGTGCCTTTAATTATATAGAATCGCACCGTGACGAGTATCAGTTGTCACATGATCTGACAGAGATCATCCTGCAATTTCCTTCGACGGCGTCACAAATAAGCGCCAGGCTAAGTCGGAGCTGTATGAAGATCGATCATTGCGTGATCGAATACCGTCAGCAGGTCCCAATCAACGCCACAGGGTCGGTGGTAGTGGAGATTCACGACAAGAGGATGACGGACAACGAGTCTTTACAGGCGTCGTGGACTTTCCCGATCAGATGCAACATAGATCTCCACTACTTCTCGTCCTCTTTCTTCTCCTTGAAAGACCCAATTCCATGGAAGCTCTATTACAAGGTCTGCGATACGAATGTTCATCAGAGGACGCATTTCGCCAAGTTCAAGGGGAAATTGAAGCTGTCGACGGCCAAACACTCTGTGGATATTCCTTTCAGGGCTCCGACGGTGAAGATCCTGTCGAAACAGTTCACCGATAAAGATGTGGACTTTTGCCACGTCGACTACGGGAGATGGGAGAGGAAACCAGTCCGATCCGCATCCACATCAAGAGTTGGGCTTCCAAGCCCAATCGAAATAAGGCCAGGAGAGTCCTGGGCTATCAGGAGCATGATAGGGCCCAATCAATCCGATGCGGGATCGGACTTGGGAGAGGCCTTACACCCGTACCGAGAGCTTAACAGGCTACAGACTACAGTCTTGGACCCAGGTGACTCAGCCTCGATCGTAGGGACCCAGAGGTCTCAATCGAACATAACGCTGTCGCTGGCCCAATTAAACGACATTGTCAGGTCCACGGTCCAAGAATGTATTAACACCAACTGTATTCCCTCCCAACCCAAATCTTTGAAATAA |
Protein Sequence | MESQLMNAPSAFNYIESHRDEYQLSHDLTEIILQFPSTASQISARLSRSCMKIDHCVIEYRQQVPINATGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYKVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDVDFCHVDYGRWERKPVRSASTSRVGLPSPIEIRPGESWAIRSMIGPNQSDAGSDLGEALHPYRELNRLQTTVLDPGDSASIVGTQRSQSNITLSLAQLNDIVRSTVQECINTNCIPSQPKSLK |
NCBI Accession | YP_009310077.1 |
---|---|
Location | 212-967 |
Gene Name | CP |
Protein Name | coat protein |
Coding Region | ATGCCTAAACGGGAAGCCCCATGGCGCCTGATGGCGGGAACGACCAAGGTTAGTCGATCTACTGGCTATTCATCTCGTTTAGCTTCCCAGCCCAGAGTCAACAAGGCCCAAGAATGGGTGAACAGGCCTATGTACAGGAAGCCCAGGATATATAGGGCTATGAGGACACCTGATGTCCCTAGAGGGTGTGAGGGGCCTTGTAAGGTCCAGTCCTACGAGCAGCGGCATGATATCTCTCATGCCGGGAAGGTGATCTGTATATCTGATGTCACACGTGGCAGTGGTATCACCCACCGTGTTGGTAAGCGTTTCTGTGTCAAGTCTGTATACATATTAGGCAAGATCTGGATGGACGAGAACATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGAGACAGACGACCGAACGGTACGCCCATGGATTTCGGACATTTATTTAACATGTTCGACAACGAGCCCAGCACCGCTACGGTCAAGAACGATCTCCGTGATCGTTTCCAGGTTTTGCACAGGTTCTATGCTAAGGTCACAGGTGGTCAGTATGCCAGCAATGAACAGGCGCTGGTCAAGCGTTTCTGGAAGGTCAACAACCATGTGGTGTACAACAACCAGGAAGCCGCTCGATACGAGAATCATACGGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCGTCTAACCCCGTGTATGCTACGCTTAAGATTCGAATCTACTTCTACGATTCGATAACAAATTAA |
Protein Sequence | MPKREAPWRLMAGTTKVSRSTGYSSRLASQPRVNKAQEWVNRPMYRKPRIYRAMRTPDVPRGCEGPCKVQSYEQRHDISHAGKVICISDVTRGSGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPNGTPMDFGHLFNMFDNEPSTATVKNDLRDRFQVLHRFYAKVTGGQYASNEQALVKRFWKVNNHVVYNNQEAARYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | YP_009310078.1 |
---|---|
Location | 964-1362 |
Gene Name | REn |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACCGGGGAGAGCATCACTGCACATCAGGCGGAGAGTGGCGTCTATACCTGGGAAATAACAAATCCCCTGTATTTCAAGATATACAGGGTCGAAGACCTCCTGTTCACAAGGACCCGAGTGTATCACATCCAAATACGGTTCAACTACAACCTGCGGAAAGCGTTGCATCTCCACAAGGCCTATTTGAATTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGAAGACTTATTTAAGTAGGTTTAGGCACCTTGTCTTGTTGTATCTTGATCAATTAGGTGTAATTTGTCTTAACAATGTAATTAGAGCTGTTCGTTTCGCAACGGATAAGTCTTATGTAAATTATGTGCTCGAGAATCATTCAATAAAATTCAAAATTTATTAA |
Protein Sequence | MDSRTGESITAHQAESGVYTWEITNPLYFKIYRVEDLLFTRTRVYHIQIRFNYNLRKALHLHKAYLNFQVWTTSMTASGKTYLSRFRHLVLLYLDQLGVICLNNVIRAVRFATDKSYVNYVLENHSIKFKIY |
NCBI Accession | YP_009310079.1 |
---|---|
Location | 1109-1513 |
Gene Name | TrAP |
Protein Name | trans-activating protein |
Coding Region | ATGTTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAGCAGCAACACAGGATTGCCAAGAAGAGGCAGGCCAAGACGAGGGCCATCAGGAGGCGACGCATTGACATCGAGTGCGGCTGCTCCATATACGTCCACATAAACTGCACGGGGCATGGATTCACGCACCGGGGAGAGCATCACTGCACATCAGGCGGAGAGTGGCGTCTATACCTGGGAAATAACAAATCCCCTGTATTTCAAGATATACAGGGTCGAAGACCTCCTGTTCACAAGGACCCGAGTGTATCACATCCAAATACGGTTCAACTACAACCTGCGGAAAGCGTTGCATCTCCACAAGGCCTATTTGAATTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGAAGACTTATTTAAGTAG |
Protein Sequence | MLNSSSSTPPSIKQQHRIAKKRQAKTRAIRRRRIDIECGCSIYVHINCTGHGFTHRGEHHCTSGGEWRLYLGNNKSPVFQDIQGRRPPVHKDPSVSHPNTVQLQPAESVASPQGLFEFPSLDDIDDSFWEDLFK |
NCBI Accession | YP_009310080.1 |
---|---|
Location | 1410-2510 |
Gene Name | REP |
Protein Name | replication-associated protein |
Coding Region | ATGCCACCGCCCAAACGATTTAGACTCCAGGCTAAAAATATCTTCCTCACTTATCCACAGTGCTCTCTGTCAAAAGAAGAAGCACTTTCCCAATTACAGAGTATCCATCTCCCTTCGAACAAGAAGTTCATCAAAATCGCCAGAGAGCTTCACGACGATGGGCAACCTCACCTCCATATTCTCCTACAACTCGAAGGGAAAGTCCAGATCACAAATAACAGACTGTTCGATCTGGTGTCCCCTTCCCGGTCAGCACATTTCCATCCGAACATACAGAGAGCTAAATCCAGCTCCGACGTCAAGTCCTATGTCGAGAAGGACGGGGACACCATCGAATGGGGAGAGTTCCAGGTCGACGGTCGAAGTGCTAGAGGCGGCCAGCAGACAGCTAACGACGCAGCCGCCGAGGCACTGAACGCTCCGTCGAAGGAGGAGGCCATGAAAATCATCAAAGAAAAGTTGCCGGAAAAGTTCCTGTTCCAGTACCATAATCTGTCGAGCAACCTGGACAGGATTTTCAAAAAGGCGCCGGAGCCATGGACTCCTCCTTTTCGACTGTCCTCGTTCACTAACGTCCCGGACGAGATGCAGGAGTGGGCCGATGACTATTTTGCGAGAGATGCCGCTGCGCGGCCTGTCAGGCCTGTTAGTATCATCGTCGAAGGTGACAGTCGAACGGGGAAGACGATGTGGGCACGTGCTTTAGGGTCCCACAATTATCTCAGTGGACACCTGGATTTCAATTCCAGGGTCTTTTCCAACGAGGCTGAGTATAACGTCATTGATGACGTCCCTCCGCACTACCTAAAGCTAAAGCACTGGAAAGAGCTCCTCGGGTCCCAAAGAGACTGGCAGTCAAATTGCAAATACGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTCTGCAATCCTGGAGAGGGGGCCAGTTATAAAGACTTCCTGGACAAAGAGGAAAATGCAGCCTTGAGGTCGTGGACACTCCACAATGTTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAGCAGCAACACAGGATTGCCAAGAAGAGGCAGGCCAAGACGAGGGCCATCAGGAGGCGACGCATTGA |
Protein Sequence | MPPPKRFRLQAKNIFLTYPQCSLSKEEALSQLQSIHLPSNKKFIKIARELHDDGQPHLHILLQLEGKVQITNNRLFDLVSPSRSAHFHPNIQRAKSSSDVKSYVEKDGDTIEWGEFQVDGRSARGGQQTANDAAAEALNAPSKEEAMKIIKEKLPEKFLFQYHNLSSNLDRIFKKAPEPWTPPFRLSSFTNVPDEMQEWADDYFARDAAARPVRPVSIIVEGDSRTGKTMWARALGSHNYLSGHLDFNSRVFSNEAEYNVIDDVPPHYLKLKHWKELLGSQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENAALRSWTLHNVKFIFLDSPLYQAATQDCQEEAGQDEGHQEATH |
NCBI Accession | YP_009310081.1 |
---|---|
Location | 2096-2353 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGGGCAACCTCACCTCCATATTCTCCTACAACTCGAAGGGAAAGTCCAGATCACAAATAACAGACTGTTCGATCTGGTGTCCCCTTCCCGGTCAGCACATTTCCATCCGAACATACAGAGAGCTAAATCCAGCTCCGACGTCAAGTCCTATGTCGAGAAGGACGGGGACACCATCGAATGGGGAGAGTTCCAGGTCGACGGTCGAAGTGCTAGAGGCGGCCAGCAGACAGCTAACGACGCAGCCGCCGAGGCACTGA |
Protein Sequence | MGNLTSIFSYNSKGKSRSQITDCSIWCPLPGQHISIRTYRELNPAPTSSPMSRRTGTPSNGESSRSTVEVLEAASRQLTTQPPRH |
1 |
Complete sequence of a new bipartite begomovirus infecting Sida sp. in Northeastern Brazil. Macedo MA, et al. Arch Virol. 2020 Jan;165(1):253-256. doi: 10.1007/s00705-019-04458-9. Epub 2019 Nov 22. PMID: 31758274 |
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2 |
Complete genome sequence of a new bipartite begomovirus infecting tomato in Brazil. Rego-Machado CM, et al. Arch Virol. 2019 Nov;164(11):2873-2875. doi: 10.1007/s00705-019-04380-0. Epub 2019 Aug 20. PMID: 31432269 |
3 |
Two new begomoviruses that infect non-cultivated malvaceae in Brazil. Passos LS, et al. Arch Virol. 2017 Jun;162(6):1795-1797. doi: 10.1007/s00705-017-3283-7. Epub 2017 Feb 23. PMID: 28233144 |