Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_003029395.1 |
Isolate | Brazil |
Release date | 2018/8/26 |
Submitter | Ferro,C.G., Silva,J.P., Xavier,C.A.D., Godinho,M.T., Lima,A.T.M., Mar,T.B., Lau,D., Zerbini,F.M. |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009508418.1 |
---|---|
Location | 199-948 |
Protein Name | CP |
Coding Region | ATGCCCAAGCGGGACGCTCCATGGCGCATAATGGCGGGGACCTCAAAGGTTTCCCGCTCTGTCAATTATTCACCCCGTGGTGGTCCTAAATTGGACAAGGCATCCGCTTGGGTCAACAGGCCCATGTACAGGAAGCCCAGGATTTACCGCACTTTGAGAAGCCCAGACGTCCCTAAGGGATGTGAAGGCCCGTGCAAGGTCCAGTCATATGAGTCTCGTCATGACGTTTCCCATGTTGGCAAGGTGATCTGTGTGTCAGATGTTACACGTGGCAACGGTATTACTCACCGCGTGGGTAAGCGATTCTGCGTCAAGTCTGTGTATATATTAGGGAAGATCTGGATGGATGAGACCATCAAGTTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTTAGGGACCGGAGACCTTATGGAACGCCTATGGATTTTGGCCAAGTGTTCAACATGTTCGACAACGAGCCCAGTACTGCCACCGTTAAGAACGATCTTCGAGATCGTTTTCAGGTTTTGCACAAGTTCTACGCCAAGGTTACGGGTGGACAGTATGCCAGCAACGAGCAGGCTATCGTGAAGCGCTTCTGGAAGGTCAACAATTACGTGGTCTACAACCATCAGGAAGCAGGGAAATATGAGAATCATACTGAAAACGGTCTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACATTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAA |
Protein Sequence | MPKRDAPWRIMAGTSKVSRSVNYSPRGGPKLDKASAWVNRPMYRKPRIYRTLRSPDVPKGCEGPCKVQSYESRHDVSHVGKVICVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDETIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVLHKFYAKVTGGQYASNEQAIVKRFWKVNNYVVYNHQEAGKYENHTENGLLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | YP_009508419.1 |
---|---|
Location | 945-1343 |
Protein Name | REN |
Coding Region | ATGGATTCACGCACAGGGGAGAACATCACTGTGTCTCAGGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTTTATTTCAGGATCGACCATGTGGAGGATCCGATATACACAATGACAAGGATATACCACATCCAGATACGGTTCAACCACAACGTCAGGAAGGCGCTGGGTCTACACAAAGCCTACCTGAACTTCCAAGTCTGGACGACCTCGATTCGAGCTTCTGGGACGACATATTTACATAGATTTAAGCATTTAGTTAATATGTATTTAGATAATATAGGTGTTATAGGACTTAACCATGTAATAAGAGCTGTTCGATTCGCAACAGACAAATATTATGTAAATTATGTACTCGAGAATCATGAAATAAAATTCAAATTTTATTAA |
Protein Sequence | MDSRTGENITVSQAENSVFIWEVPNPLYFRIDHVEDPIYTMTRIYHIQIRFNHNVRKALGLHKAYLNFQVWTTSIRASGTTYLHRFKHLVNMYLDNIGVIGLNHVIRAVRFATDKYYVNYVLENHEIKFKFY |
NCBI Accession | YP_009508420.1 |
---|---|
Location | 1090-1479 |
Protein Name | TRAP |
Coding Region | ATGCGAAATTCATCTTCCTCGACGCCCCCCTCTATCAAACCACAACACAAAATCGCGAAGAAGAGGGCAATTCGTCGTAAGCGCATTGACCTCAATTGCGGCTGTTCCATCTTCCTCCACATCAACTGCGCAAATCATGGATTCACGCACAGGGGAGAACATCACTGTGTCTCAGGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTTTATTTCAGGATCGACCATGTGGAGGATCCGATATACACAATGACAAGGATATACCACATCCAGATACGGTTCAACCACAACGTCAGGAAGGCGCTGGGTCTACACAAAGCCTACCTGAACTTCCAAGTCTGGACGACCTCGATTCGAGCTTCTGGGACGACATATTTACATAG |
Protein Sequence | MRNSSSSTPPSIKPQHKIAKKRAIRRKRIDLNCGCSIFLHINCANHGFTHRGEHHCVSGREFRFYLGGSKSPLFQDRPCGGSDIHNDKDIPHPDTVQPQRQEGAGSTQSLPELPSLDDLDSSFWDDIFT |
NCBI Accession | YP_009508421.1 |
---|---|
Location | 1400-2479 |
Protein Name | Rep |
Coding Region | ATGCCATCCGTTCCAAAACGATTCCGTATTTCTTCCAAAAATTATTTCCTCACATACCCCCTATGCACATTAACCAAGGAAGAAACCCTTTCCCAAATAAAAGCCCTAAACACCCCAACAAATAAGAAGTTCATCAAAATATGCAGAGAGCTTCATGAAAATGGGCAACCTCACCTCCACGTGCTTCTCCAATTCGAAGGCAAATTCGTGTGCACAAATCAGAGACTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCCGACGTCAAGTCCTACATCGACAAGGACGGTGACACCCTCGAATGGGGAGAATTCCAAATCGACGGAAGAAGTGCTAGAGGAGGTTGCCAGACAGCTAACGACGCTGCCGCAGAGGCCTTAAACGCCCCTTCAAAAGAAGCGGCGTTACAAATAATAAGAGAGAAGCTGCCGGAGAAATTTCTCTTTCAATATCACAATCTGTCCAGTAACCTGGACAGAATTTTCTCTAAGGCTCCAGAACCGTGGGTTCCTCCGTTTCTTCTCTCAACCTTCACTGCCGTTCCGGATGAGATGCAAGAGTGGGCTGATGATTATTTCGGTAGGGGTGCCGCTGCGCGGCCAGACAGACCTATTAGTTTGATTGTCGAGGGTGATTCGAGAACGGGAAAGACGATGTGGGCTCGTGCATTAGGCCCACATAATTATTTAAGTGGACACCTAGACTTCAATTCTAGGGTTTACTCAAATGAAGCGGAATACAACGTCATTGATGACGTTGCCCCGCAATATCTAAAGATGAAGCACTGGAAAGAGCTGATTGGGGCCCAAAAAGACTGGCAGTCCAACTGTAAATATGGAAAGCCAGTTCAAATTAAAGGAGGCATTCCATCAATCGTGCTATGCAATCCAGGCGAGGGGGCTAGCTATAAAGACTTCCTCAACAAAGAGGAAAATGCTTCACTGAGAGCGTGGACAATACACAATGCGAAATTCATCTTCCTCGACGCCCCCCTCTATCAAACCACAACACAAAATCGCGAAGAAGAGGGCAATTCGTCGTAA |
Protein Sequence | MPSVPKRFRISSKNYFLTYPLCTLTKEETLSQIKALNTPTNKKFIKICRELHENGQPHLHVLLQFEGKFVCTNQRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGCQTANDAAAEALNAPSKEAALQIIREKLPEKFLFQYHNLSSNLDRIFSKAPEPWVPPFLLSTFTAVPDEMQEWADDYFGRGAAARPDRPISLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNEAEYNVIDDVAPQYLKMKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLNKEENASLRAWTIHNAKFIFLDAPLYQTTTQNREEEGNSS |
NCBI Accession | YP_009508422.1 |
---|---|
Location | 2062-2325 |
Protein Name | AC4 protein |
Coding Region | ATGAAAATGGGCAACCTCACCTCCACGTGCTTCTCCAATTCGAAGGCAAATTCGTGTGCACAAATCAGAGACTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCCGACGTCAAGTCCTACATCGACAAGGACGGTGACACCCTCGAATGGGGAGAATTCCAAATCGACGGAAGAAGTGCTAGAGGAGGTTGCCAGACAGCTAACGACGCTGCCGCAGAGGCCTTAA |
Protein Sequence | MKMGNLTSTCFSNSKANSCAQIRDSSTWYPQPGQHISIRTFRELNHRPTSSPTSTRTVTPSNGENSKSTEEVLEEVARQLTTLPQRP |
1 |
Two new begomoviruses infecting tomato and Hibiscus sp. in the Amazon region of Brazil. Quadros AFF, et al. Arch Virol. 2019 Jul;164(7):1897-1901. doi: 10.1007/s00705-019-04245-6. Epub 2019 Apr 10. PMID: 30972592 |
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2 |
Complete sequence of a new bipartite begomovirus infecting Sida sp. in Northeastern Brazil. Macedo MA, et al. Arch Virol. 2020 Jan;165(1):253-256. doi: 10.1007/s00705-019-04458-9. Epub 2019 Nov 22. PMID: 31758274 |
3 |
Zambrano K, et al. Arch Virol. 2011 Dec;156(12):2263-6. doi: 10.1007/s00705-011-1093-x. Epub 2011 Aug 19. PMID: 21853328 |
4 |
Hernández-Zepeda C, et al. Virus Genes. 2007 Dec;35(3):825-33. doi: 10.1007/s11262-007-0149-1. Epub 2007 Aug 8. PMID: 17682933 |