Sauropus leaf curl virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_002823285.1 |
| Isolate | Thailand: Kamphaengsaen |
| Release date | 2018/8/25 |
| Submitter | Shih,S.L., Tsai,W.S., Lee,L.M., Kenyon,L. |
| Host | |
| Vector | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_038455
Gene Information
| NCBI Accession | YP_009506455.1 |
|---|---|
| Location | 147-497 |
| Gene Name | V2 |
| Protein Name | pre-coat protein |
| Coding Region | ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTCAAATACCTGCAGTTAGTAGAGAAGACGTATTCGCCTGACACATTAGGGCACGATCTTATACGAGATTTAATATCAGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGACGTCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAAAAGGATATGGACCAACAGGCCCATGTATCGCAAGCCCAGATTCTACAGAGTGTACAAAAGCCCTGA |
| Protein Sequence | MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDLISVIRARNYVEATRRYSHFNSRLEGTTSSELRHPRDEPCCCPHCPRHQQKKDMDQQAHVSQAQILQSVQKP |
| NCBI Accession | YP_009506456.1 |
|---|---|
| Location | 307-1080 |
| Gene Name | V1 |
| Protein Name | coat protein |
| Coding Region | ATGTCGAAGCGACCCGCCGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGACGTCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAAAAGGATATGGACCAACAGGCCCATGTATCGCAAGCCCAGATTCTACAGAGTGTACAAAAGCCCTGATGTGCCCCGTGGTTGTGAGGGTCCCTGTAAGGTCCAGTCGTTCGAGAAGAAGCATGATGTGGGTCATACTGGTACATTATTATGTGTGTCGGATGTTACTCGTGGAAATGGGCTTACCCATCGTGTTGGTAAGAGGTTTTGTATTAAGTCTATTTACATTCTGGGTAAGTTATGGATGGATGAGAACATCAAGACGAAGAATCACACGAACACAGTCATGTTCTGGTTAGTTAGGGATAGGCGTCCTATGACAACGCCCTATGGGTTCGGCGAGGCATTCAACATGTACGACAATGAGCCCAGTACAGCCACTATCAAGAACGATCTTCGTGATCGTCTGCAGGTGCTGCATAGGTTTCAAGCCACGCTCACGGGAGGTCAGTACGCGTGCAAGGAACAGGTCATGGTGAAGAGGTTCTGGAAGATCAACAATCACGTCGTGTACAACCATCAGGAGAAGGCTGCTTACGAGAATCACAATGAGAACGCATTAATATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACACTGAAGATCCGCATCTACTTCTATGATTCAGTGCAGAATTAA |
| Protein Sequence | MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNKKRIWTNRPMYRKPRFYRVYKSPDVPRGCEGPCKVQSFEKKHDVGHTGTLLCVSDVTRGNGLTHRVGKRFCIKSIYILGKLWMDENIKTKNHTNTVMFWLVRDRRPMTTPYGFGEAFNMYDNEPSTATIKNDLRDRLQVLHRFQATLTGGQYACKEQVMVKRFWKINNHVVYNHQEKAAYENHNENALILYMACTHASNPVYATLKIRIYFYDSVQN |
| NCBI Accession | YP_009506457.1 |
|---|---|
| Location | 1077-1481 |
| Gene Name | C3 |
| Protein Name | replication enhancement protein |
| Coding Region | ATGGATTTTCGCACCGGGGAGTACATCACTGCAACTCAGGCAGAGAGTGGCGTCTATACCTGGACGGTCAGAAATCCCCTCTATTTCAAGATTACCAAGCACCTGGAGAGGCCATTCCTGACGGACCACGACGTAATAACAATCCAGGTCCAGTTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAATGTTTCCTGATCTGCCAGATCTGGACTCGTTTACGTCCTCAGACTGGGCGTTTCTTAAGAGTATTTAATATTCAATGTATGAAGTATTTAGATACATTAGGAGTTATTAGCATTAACAATGTAATTAGGGCTATTGATCATGTACTGTACGATGTACTGGAGGGCACAATTGATGCTCAATTGACACATATAATAAAATATAATCTTTATTAA |
| Protein Sequence | MDFRTGEYITATQAESGVYTWTVRNPLYFKITKHLERPFLTDHDVITIQVQFNYNLRKALGMHQCFLICQIWTRLRPQTGRFLRVFNIQCMKYLDTLGVISINNVIRAIDHVLYDVLEGTIDAQLTHIIKYNLY |
| NCBI Accession | YP_009506458.1 |
|---|---|
| Location | 1222-1629 |
| Gene Name | C2 |
| Protein Name | transcriptional activation protein |
| Coding Region | ATGCAAAATTCATCTTCCTCTCAGAGCAACTGTACTCAGGTACCCATCAAAGTCCAGCACAGAATAGCCAAGAAGAAGACGATCCGCAGGAGGAGAGTTGATCTACCTTGCGGGTGCTCGTACTTCTTCCCAATTACCTGTGCAAACCATGGATTTTCGCACCGGGGAGTACATCACTGCAACTCAGGCAGAGAGTGGCGTCTATACCTGGACGGTCAGAAATCCCCTCTATTTCAAGATTACCAAGCACCTGGAGAGGCCATTCCTGACGGACCACGACGTAATAACAATCCAGGTCCAGTTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAATGTTTCCTGATCTGCCAGATCTGGACTCGTTTACGTCCTCAGACTGGGCGTTTCTTAAGAGTATTTAA |
| Protein Sequence | MQNSSSSQSNCTQVPIKVQHRIAKKKTIRRRRVDLPCGCSYFFPITCANHGFSHRGVHHCNSGREWRLYLDGQKSPLFQDYQAPGEAIPDGPRRNNNPGPVQLQPEESTGDAPMFPDLPDLDSFTSSDWAFLKSI |
| NCBI Accession | YP_009506459.1 |
|---|---|
| Location | 1529-2617 |
| Gene Name | C1 |
| Protein Name | replication-associated protein |
| Coding Region | ATGCCTAGAGCCGGACGTTTTTCTATTAAAGCAAAAAATTATTTTCTTACATATCCTCAGTGCTCACTCACAAAGGAAGAAGCACTTTCCCAAATCCAAAACCTAAAAACCCCAACAAATAAAAAATATATCAAAATCTGCAGAGAGTTACACGAAGATGGGAGCCCTCATCTCCACGTGCTCATCCAATTCGAAGGGAAATACAACTGCTCGAATAACAGATTCTTCGACCTGGTGTCCCCAACCAGGGCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATCTGGACAAGGACGGAGACACCCTCGACTGGGGAGAATTCCAGATCGACGCTAGAAGTGCTAGAGGGGGCTGCCAGAATGCTAACGACGCATGCGCAGAAGCCTTAAATGCAGGTTCTAAAGAAGCAGCATTAAATATAATAAGGGAAAAACTCCCAAAAGATTATATTTTTCAATTTCATAATTTAAATGCTAATTTAGATAGAATTTTTTCACCTCCCGTAGAGGTTTTTGTTTCTCCTTTTTTAGCTTCTTCATTCGATCAAGTTCCGGAAGAACTTGAATGTTGGGCGGAGGAGAATGTCAGGGATGCCGCTGCGCGGCCTTGGAGACCGGTGAGTATAGTGATAGAGGGAGAGAGTAGAACTGGGAAAACAATGTGGGCCAGATCACTAGGCCCACATAATTACCTTTGTGGGCATCTAGACTTGAGCCCCAAGATCTACTCTAATGACGCATGGTATAACGTCATCGATGATGTTGACCCCCACTATCTGAAACACTTTAAAGAATTCATGGGGGCCCAGAGGGATTGGCAAAGCAATACCAAGTACGGGAAGCCAATTCAAATTAAAGGGGGCATTCCGACAATCTTCCTATGCAATCCTGGTCCAACATCATCATATAAGGAATATCTGGATGAGGATAAAAATTCAGCTCTAAAATCGTGGGCACTGAAGAATGCAAAATTCATCTTCCTCTCAGAGCAACTGTACTCAGGTACCCATCAAAGTCCAGCACAGAATAGCCAAGAAGAAGACGATCCGCAGGAGGAGAGTTGA |
| Protein Sequence | MPRAGRFSIKAKNYFLTYPQCSLTKEEALSQIQNLKTPTNKKYIKICRELHEDGSPHLHVLIQFEGKYNCSNNRFFDLVSPTRAAHFHPNIQGAKSSSDVKSYLDKDGDTLDWGEFQIDARSARGGCQNANDACAEALNAGSKEAALNIIREKLPKDYIFQFHNLNANLDRIFSPPVEVFVSPFLASSFDQVPEELECWAEENVRDAAARPWRPVSIVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKSWALKNAKFIFLSEQLYSGTHQSPAQNSQEEDDPQEES |
| NCBI Accession | YP_009506460.1 |
|---|---|
| Location | 2203-2460 |
| Gene Name | C4 |
| Protein Name | C4 protein |
| Coding Region | ATGGGAGCCCTCATCTCCACGTGCTCATCCAATTCGAAGGGAAATACAACTGCTCGAATAACAGATTCTTCGACCTGGTGTCCCCAACCAGGGCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATCTGGACAAGGACGGAGACACCCTCGACTGGGGAGAATTCCAGATCGACGCTAGAAGTGCTAGAGGGGGCTGCCAGAATGCTAACGACGCATGCGCAGAAGCCTTAA |
| Protein Sequence | MGALISTCSSNSKGNTTARITDSSTWCPQPGQHISIQTFRELNPAPTSSPIWTRTETPSTGENSRSTLEVLEGAARMLTTHAQKP |
References More References in PubMed
| 1 |
Cotton leaf curl virus disease. Briddon RW, et al. Virus Res. 2000 Nov;71(1-2):151-9. doi: 10.1016/s0168-1702(00)00195-7. PMID: 11137169 |
|---|---|
| 2 |
Huang L, et al. Plant Biol (Stuttg). 2012 Nov;14(6):905-13. doi: 10.1111/j.1438-8677.2012.00582.x. Epub 2012 Apr 18. PMID: 22512888 |
| 3 |
Chen N, et al. J Exp Bot. 2024 Sep 27;75(18):5819-5838. doi: 10.1093/jxb/erae257. PMID: 38829390 |
| 4 |
Tomato Yellow Leaf Curl Sardinia Virus Increases Drought Tolerance of Tomato. Sacco Botto C, et al. Int J Mol Sci. 2023 Feb 2;24(3):2893. doi: 10.3390/ijms24032893. PMID: 36769211 |
| 5 |
Tomato Yellow Leaf Curl Virus (TYLCV) Promotes Plant Tolerance to Drought. Shteinberg M, et al. Cells. 2021 Oct 25;10(11):2875. doi: 10.3390/cells10112875. PMID: 34831098 |
| 6 |
Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops. Moriones E, et al. Viruses. 2017 Sep 21;9(10):264. doi: 10.3390/v9100264. PMID: 28934148 |
| 7 |
Detection of Tomato Leaf Curl New Delhi Virus-ES by Real-Time Quantitative PCR. Janssen D, et al. Methods Mol Biol. 2025;2912:145-156. doi: 10.1007/978-1-0716-4454-6_12. PMID: 40064778 |
| 8 |
Akbar A, et al. Virol J. 2024 Nov 27;21(1):308. doi: 10.1186/s12985-024-02540-6. PMID: 39605076 |
| 9 |
Tomato yellow leaf curl virus, an emerging virus complex causing epidemics worldwide. Moriones E, et al. Virus Res. 2000 Nov;71(1-2):123-34. doi: 10.1016/s0168-1702(00)00193-3. PMID: 11137167 |
| 10 |
Leclair P, et al. Arch Virol. 2025 Jul 5;170(8):173. doi: 10.1007/s00705-025-06345-y. PMID: 40616602 |