| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000902035.1 |
| Isolate | Venezuela |
| Release date | 2015/2/22 |
| Submitter | Fiallo-Olive,E., Marquez-Martin,B., Hassan,I., Chirinos,D.T., Geraud-Pouey,F., Navas-Castillo,J., Moriones,E., Chirinos,D. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
| NCBI Accession | YP_007024778.1 |
|---|---|
| Location | 412-1182 |
| Gene Name | BV1 |
| Protein Name | nuclear shuttle protein |
| Coding Region | ATGCATTATTCTAGGAATAGACGTGGTTCTAACCCCGCTGGACGACGATATTATCCACGTAACACTGTGTTTACGCGTCTAACTCCATCGAAAAAGCATGGTGGGAAACGTGGAGGAGTCAATTCCAGCAAGTCCAGTGATGAGCCCAAGATGAAGGCCCAAGTCATACATGAGAATCAGTATGGGTCCAACTTTGTGTTGGCCCATAATTCAGCTATTTCTACCTACATCACTTATCCCAGCTTGGGGAAGACCGAACCTAGCAGGAGCAGATCCTATATTAAGTTGAAACGGTTACGTTTCAAAGGGACCGTGAAGATTGAACGTGTTCAACCGGACATGAATCTGGACGTTGCTATCCCCAAGGTGGAAGGAGTATTCACCGTCGTTGTGGTTGTGGATCGGAAACCCCATCTTGATCCATCTGGTGGACTGCATACTTTCGATGACCTCTTCGGTGCTAGGATACACAGCCACGGTAACCTCAGCATTATCCCGTCGCTGAAAGACCGCTACTGTATCCGACACGTGTGCAAACGTGTGTTGTCAGTGGAGAAGGACACGCTGATGGTAAATGTGGAAGGATCCATTCCCTTCTCTAACAGGCGTTATAATTGTTGGTCCACTTTTAAGGATCTGGATCGAGAATCATGTAATGGTGTTTATGGCAACATTAGCAAGAACGCCCTGTTAGTGTATTACTGCTGGATGTCGGATACTATGTCTAATGCATCCACATTTGTAACTTATGATCTGGATTATATTGGATGA |
| Protein Sequence | MHYSRNRRGSNPAGRRYYPRNTVFTRLTPSKKHGGKRGGVNSSKSSDEPKMKAQVIHENQYGSNFVLAHNSAISTYITYPSLGKTEPSRSRSYIKLKRLRFKGTVKIERVQPDMNLDVAIPKVEGVFTVVVVVDRKPHLDPSGGLHTFDDLFGARIHSHGNLSIIPSLKDRYCIRHVCKRVLSVEKDTLMVNVEGSIPFSNRRYNCWSTFKDLDRESCNGVYGNISKNALLVYYCWMSDTMSNASTFVTYDLDYIG |
| NCBI Accession | YP_007024779.1 |
|---|---|
| Location | 1249-2130 |
| Gene Name | BC1 |
| Protein Name | movement protein |
| Coding Region | ATGGATTCTCAGTTAGTTAATCCTCCAAGTGCCTTTAACTACATCGAGTCCCATCGGGACGAATATCAGCTTTCTCATGACCTAACTGAGATAATTCTGCAATTTCCGTCGACGGCGTCTCAGTTGACAGCTAGACTGAGTCGTAGTTGCATGAAGATCGACCACTGCGTCATAGAGTACAGACAGCAAGTTCCGATCAACGCGACGGGATCCGTAATTGTGGAGATCCACGACAAAAGGATGACGGACAACGAGTCATTACAGGCGTCATGGACTTTTCCGATCAGGTGCAACATAGATCTCCACTACTTTTCAGCTTCGTTCTTCTCGCTCAAGGACCCAATTCCATGGAAACTCTATTACAGAGTTTGCGATACGAATGTTCATCAGAGGACCCACTTCGCGAAATTCAAGGGGAAGCTGAAACTATCCACGGCGAAACACTCCGTCGACATACCTTTCCGGTCACCAACAGTAAAGATCCTGTCCAAACAGTTCACGGATAAAGATGTGGACTTCTCCCATGTCGACTACGGAAGATGGGAAAGGAAGCCCATCAGATGCGCGTCCATGTCTAGACTTGGGCTCAGAGGCCCAATTGAGTTAAGACCAGATGAATCGTGGGCTTCCAGGAGTACTGTAGGAACGGGTCAATCAGATGCGGACTCGGAGGTGGAGAACGAACTCCACCCTTACAGACACCTTAGCAGGCTTGGGACCACTGTGTTAGATCCAGGAGAGTCTGCCTCAGTGGTGGGAGCCCAGAGAGCGGAGTCAAACATCACGATGTCTATGGGCCAGTTGAACGAGCTCGTTAGGACAACGGTCCAAGAATGTATAAATAATAATTGTAGACCGTCACAGCCCAAATCATTGCAATAG |
| Protein Sequence | MDSQLVNPPSAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTARLSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRSPTVKILSKQFTDKDVDFSHVDYGRWERKPIRCASMSRLGLRGPIELRPDESWASRSTVGTGQSDADSEVENELHPYRHLSRLGTTVLDPGESASVVGAQRAESNITMSMGQLNELVRTTVQECINNNCRPSQPKSLQ |
| NCBI Accession | YP_007024780.1 |
|---|---|
| Location | 218-973 |
| Gene Name | AV1 |
| Protein Name | coat protein |
| Coding Region | ATGCCTAAGCGCGATCTCCCATGGCGCTCTATGGCGGGAACCTCAAAGGTTAGCCGTAATGTCAATTACTCCCCTCGTGGAGGAGGTGGCCCAAAATCAAGTAGGGCCTCTGAATGGGTGAACAGGCCCATGTACAGGAAGCCCAGGATCTATCGGATGATCAGGACACCCGATGTGCCCAGAGGATGTGAAGGCCCGTGTAAGGTCCAGTCTTATGAACAGCGACACGACATCTCACATGTCGGCAAGGTCATGTGCATCTCCGATGTGACACGTGGTAATGGCATTACCCACCGCGTGGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATATTAGGTAAGATCTGGATGGACGAGAACATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGATCGTAGACCGTATGGGACGCCCATGGATTTTGGGCAAGTGTTCAACATGTTCGACAACGAGCCAAGCACTGCTACGGTTAAGAACGATCTTCGCGATCGTTACCAGGTCATGCATAAGTTCTATGGGAAGGTGACAGGTGGACAGTATGCCAGCAACGAGCAAGCCATTGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTGTACAACCACCAGGAGGCTGGCAAGTATGAGAATCACACGGAGAACGCACTTCTACTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACTTTGAAGATTCGAATCTATTTTTACGATTCGATCACGAATTAA |
| Protein Sequence | MPKRDLPWRSMAGTSKVSRNVNYSPRGGGGPKSSRASEWVNRPMYRKPRIYRMIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
| NCBI Accession | YP_007024781.1 |
|---|---|
| Location | 970-1368 |
| Gene Name | AC3 |
| Protein Name | replication enhancement protein |
| Coding Region | ATGGATTCACGCACAGGGGAGAGCATCAGTGCACATCAGGCAGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTTTATTTCAAGATATACCGAGTAGAGGACCCGTTGTATACGACAACCAGAGTCTACCACGTACAAATACGGTTCAACCACAACCTCAGGAAAGCATTGGGTCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGAGAGCTTCTGGAACGACTTATTTAGTTAGGTTTAGACAATTAGTCTTGATGTACTTGGATCAGCTAGGCGTAATATCGCTTAACAATGTAATTAGAGCTGTACGATTCGCAACGGACAAATCATATGTAAATTATGTACTAGAAAATCATTCAATAAAATTCAAATTTTATTAA |
| Protein Sequence | MDSRTGESISAHQAENGVYIWEIENPLYFKIYRVEDPLYTTTRVYHVQIRFNHNLRKALGLHKAYLNFQVWTTSMRASGTTYLVRFRQLVLMYLDQLGVISLNNVIRAVRFATDKSYVNYVLENHSIKFKFY |
| NCBI Accession | YP_007024782.1 |
|---|---|
| Location | 1115-1504 |
| Gene Name | AC2 |
| Protein Name | transactivator protein |
| Coding Region | ATGCTAAATTCATCTTCCTCGACGCCCCCCTCTATCAAACAGAAGCACAGGATTGCCAAGAAGAGAGCCATCAGACGGAGGAGGATTGATCTGGGGTGCGGGTGCACAATATACTTCCACATAGGCTGCACGGGGTATGGATTCACGCACAGGGGAGAGCATCAGTGCACATCAGGCAGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTTTATTTCAAGATATACCGAGTAGAGGACCCGTTGTATACGACAACCAGAGTCTACCACGTACAAATACGGTTCAACCACAACCTCAGGAAAGCATTGGGTCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGAGAGCTTCTGGAACGACTTATTTAGTTAG |
| Protein Sequence | MLNSSSSTPPSIKQKHRIAKKRAIRRRRIDLGCGCTIYFHIGCTGYGFTHRGEHQCTSGREWRVYLGDRKSPLFQDIPSRGPVVYDNQSLPRTNTVQPQPQESIGSPQSLPELPSLDDIDESFWNDLFS |
| NCBI Accession | YP_007024783.1 |
|---|---|
| Location | 1416-2501 |
| Gene Name | AC1 |
| Protein Name | replication associated protein |
| Coding Region | ATGCCATCCATTAAACGTTTCCGTATTAATGCCAAGAACTATTTCCTTACATATCCCCAGTGCTCTCTAACCAAAGACGAGGCACTTTCCCAATTACAAAGCCTTGAAACCCTAGTTAACAAGAAATTCATCAAAGTCTGCCGAGAACTTCATGAGAATGGGGAGCCTCATCTCCATGTGCTCATCCAGTTCGAAGGAAAATACCAGTGCAAGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCAAACATACAGGGAGCTAAGTCTAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGACTCAATCGAATGGGGAGATTTCCAGATCGACGGCAGATCTGCTAGAGGAGGCCAGCAGTCTGTTAATGATTCATATGCCAAGGCGTTAAATGCAGGTTCTGTTGACGCTGCCATGGTTGTTTTAAAGGAAGAACAGCCAAAAGATTTTGTCCTGCAGAATCATAACATCCGCTCCAACCTCGAAAGGATATTCGCAAAGGCTCCGGAGCCATGGGCCCCTCCGTTTCAACTCTCCTCATTCACTAACGTTCCCGACGAGATGCAAGAGTGGGCGGATGATTATTTTGGGAGAGGTTCCGCTGCGCGGCCTGAGAGACCACTTAGTATCATCGTTGAAGGTGATTCAAGGACAGGGAAGACGATGTGGGCTCGTGCCTTAGGCCCACACAATTACCTAAGTGGACACCTGGATTTCAACTCAAAGGTCTACTCAGACGAAGTGGAGTATAACGTCATTGATGACGTACCACCGCATTACCTAAAGTTGAAACACTGGAAAGAACTGATTGGCTCTCAAAAGAAGTGGCAGTCAAACTGTAAATACGGAAAGCCAAGAGTGATTGAAGGTGGGGTCCCTTCAATCGTGCTATGCAATCCTGGAGAGGGGGCCAGCTATAAAGACTTCCTAGACAAAGAGGAAAACGCATCACTGCGTTCCTGGACATTGAAAAATGCTAAATTCATCTTCCTCGACGCCCCCCTCTATCAAACAGAAGCACAGGATTGCCAAGAAGAGAGCCATCAGACGGAGGAGGATTGA |
| Protein Sequence | MPSIKRFRINAKNYFLTYPQCSLTKDEALSQLQSLETLVNKKFIKVCRELHENGEPHLHVLIQFEGKYQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDSIEWGDFQIDGRSARGGQQSVNDSYAKALNAGSVDAAMVVLKEEQPKDFVLQNHNIRSNLERIFAKAPEPWAPPFQLSSFTNVPDEMQEWADDYFGRGSAARPERPLSIIVEGDSRTGKTMWARALGPHNYLSGHLDFNSKVYSDEVEYNVIDDVPPHYLKLKHWKELIGSQKKWQSNCKYGKPRVIEGGVPSIVLCNPGEGASYKDFLDKEENASLRSWTLKNAKFIFLDAPLYQTEAQDCQEESHQTEED |
| NCBI Accession | YP_007024784.1 |
|---|---|
| Location | 2087-2344 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGGAGCCTCATCTCCATGTGCTCATCCAGTTCGAAGGAAAATACCAGTGCAAGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCAAACATACAGGGAGCTAAGTCTAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGACTCAATCGAATGGGGAGATTTCCAGATCGACGGCAGATCTGCTAGAGGAGGCCAGCAGTCTGTTAATGATTCATATGCCAAGGCGTTAA |
| Protein Sequence | MGSLISMCSSSSKENTSARITDSSIWSPQPGQHISIQTYRELSLAPTSSPISTRTETQSNGEISRSTADLLEEASSLLMIHMPRR |
| 1 |
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Biochemical, Serological, Molecular and Natural Host Studies on Tomato Chlorosis Virus in Egypt. Mamoun Abdel-Salam AM, et al. Pak J Biol Sci. 2019 Jan;22(2):83-94. doi: 10.3923/pjbs.2019.83.94. PMID: 30972990 |