Genus | Begomovirus |
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NCBI Assembly | GCF_000887955.1 |
Isolate | India |
Release date | 2015/2/22 |
Submitter | Jyothsna,P., Rawat,R., Malathi,V.G. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_004123931.1 |
---|---|
Location | 130-489 |
Gene Name | AV2 |
Protein Name | precoat protein |
Coding Region | ATGATAAAGATGTGGGATCCATTGTTGAATGACTTTCCCAAATCACGGCATGGTTTTCGGTGCATGATTGCCATTAAGTTCTTGCAAGCCTGTCAAGAACAATATCCTAATAATTCATTGGGATTTGAATTTTTGCGCAAACTCATTTCAAATTTGCGCTCCAAGGACCATGCCAAAGCGGAATTACGATACCGCCTTCTCATCACCGCTATCAGTAGTTCGTCGAAGATTGAACTTCGACAGCCCAATGGCACTACCTGCACCTGCATCCAGTGCCCAAGGCACAACAAGGAGAAGGCGTTGGACGAATCGTCCGATGTGGAGGAAACCACGTTTTTATCGATTGTATCGGACACCTGA |
Protein Sequence | MIKMWDPLLNDFPKSRHGFRCMIAIKFLQACQEQYPNNSLGFEFLRKLISNLRSKDHAKAELRYRLLITAISSSSKIELRQPNGTTCTCIQCPRHNKEKALDESSDVEETTFLSIVSDT |
NCBI Accession | YP_004123932.1 |
---|---|
Location | 222-515 |
Gene Name | AC5 |
Protein Name | hypothetical protein |
Coding Region | ATGGACCTTCACAACCACGTGGAACATCAGGTGTCCGATACAATCGATAAAAACGTGGTTTCCTCCACATCGGACGATTCGTCCAACGCCTTCTCCTTGTTGTGCCTTGGGCACTGGATGCAGGTGCAGGTAGTGCCATTGGGCTGTCGAAGTTCAATCTTCGACGAACTACTGATAGCGGTGATGAGAAGGCGGTATCGTAATTCCGCTTTGGCATGGTCCTTGGAGCGCAAATTTGAAATGAGTTTGCGCAAAAATTCAAATCCCAATGAATTATTAGGATATTGTTCTTGA |
Protein Sequence | MDLHNHVEHQVSDTIDKNVVSSTSDDSSNAFSLLCLGHWMQVQVVPLGCRSSIFDELLIAVMRRRYRNSALAWSLERKFEMSLRKNSNPNELLGYCS |
NCBI Accession | YP_004123933.1 |
---|---|
Location | 299-1072 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCAAAGCGGAATTACGATACCGCCTTCTCATCACCGCTATCAGTAGTTCGTCGAAGATTGAACTTCGACAGCCCAATGGCACTACCTGCACCTGCATCCAGTGCCCAAGGCACAACAAGGAGAAGGCGTTGGACGAATCGTCCGATGTGGAGGAAACCACGTTTTTATCGATTGTATCGGACACCTGATGTTCCACGTGGTTGTGAAGGTCCATGTAAGGTTCAATCCTTTGAACAACGGCATGATATTGCCCATACTGGCAAAGTAATTTGCATTTCAGATGTTACTCGAGGTAATGGAATTACTCATCGTGTTGGGAAACGTTTCTGTGTCAAGTCCGTATATATTACTGGTAAGGTTTGGATGGACGAGAATATTAAGTCCAAAAACCATACTAATACGGTCATGTTTAAGTTATGTCGTGACAGACGACCCTTTGGGACTCCTATGGATTTCGGTCAGGTGTTTAATATGTATGATAATGAACCAAGTACTGCGACAGTGAAGAACGATCTTCGTGATCGTTTTCAAGTTCTGCGAAGATTTAATGCCACGGTTACAGGTGGCCAATATGCATGCAAGGAGCAAGCCATGGTTAACCGTTTTTATCGTGTTAACAATCATGTGGTTTATAATCATCAGGAAGCTGCCAAATATGAAAATCATACTGAGAATGCGTTGTTATTGTATATGGCATGTACTCATGCTTCAAACCCTGTGTATGCGACATTAAAGATCAGGATCTATTTCTATGATTCTGTTGGAAATTAA |
Protein Sequence | MPKRNYDTAFSSPLSVVRRRLNFDSPMALPAPASSAQGTTRRRRWTNRPMWRKPRFYRLYRTPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITHRVGKRFCVKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNEPSTATVKNDLRDRFQVLRRFNATVTGGQYACKEQAMVNRFYRVNNHVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSVGN |
NCBI Accession | YP_004123934.1 |
---|---|
Location | 1212-1619 |
Gene Name | AC2 |
Protein Name | transcription activator protein |
Coding Region | ATGCGGAATTCTACACCATCAAAGAACCATTTTTCACCACCGTCAATCAAAGCGCAACACAGGTGCGCCAAGAAGAAAGCAATTCGACGCAAACGAATTGACCTCAAGTGCGGCTGCTCATATTATATGCACATTAACTGTGCTAACCATGGATTTACGCACAGGGGAGAACATCACTGCAATTCAAGCACAGAATGGCGTATATATCTGGGAGATAAAAAATCCCCTATATTTCAAGATCCTCGAGCATCACAAGAGACCGTTCAACAGCAACAACGACATTTTGACTGTCCAGATCAGATTCAACCACAACTTAAGGAAGGCACTGGGGATTCACAAATGTTTTTTGACCTTCAAAATTTGGACGACCTTACGGCCTCCGACTGGTCTTTTCTTAAAGACATTTAA |
Protein Sequence | MRNSTPSKNHFSPPSIKAQHRCAKKKAIRRKRIDLKCGCSYYMHINCANHGFTHRGEHHCNSSTEWRIYLGDKKSPIFQDPRASQETVQQQQRHFDCPDQIQPQLKEGTGDSQMFFDLQNLDDLTASDWSFLKDI |
NCBI Accession | YP_004123935.1 |
---|---|
Location | 1519-2607 |
Gene Name | AC1 |
Protein Name | replication initiation protein |
Coding Region | ATGGCAAATTCGAGTCGTTTCAAGATAAACGCAAAGAACTATTTCCTTACATATCCCAGATGCACTCTGTCAAAGGAAGCTGCTTTGGAGCAATTACTCGCTATATCAACTCCTGTAAACAAGAAATTCATCCGAATTTGCAGAGAACTTCATGAAGATGGCATTCCTCACTTACATGTTCTGCTTCAATTCGAAGGAAAATTCCAGTGCAAAAACCAGAGGTTCTTCGATCTCCATGCCGAAACCAGGTCAACATATTTCCATCCGAACATTCAGGGAGCTAAAAGTAGCTCAGATGTTAAAAAATACATGGAAAAAGACGGAGACGTCGTTGATCATGGAGAATTCCAAATTGATGGTCGATCAAGTCGAGGAGGTAAGCAATCTGCAAACGACGCTTATGCCGAAGCAATCAATGCAGGAAATACCTCTGAGGCGCTCGTTATACTAAAGGAAAAGGCTCCGAAGGATTTCGTTTTATATTTTCATAATTTAGCTAAGAATTTTGATAAAATTTTTGAAAAAAGTGTTCCAGTTTATGAACCTCGTTATTCAATTGAATCATTCGATAATGTTCCACCGTACATTTCTTCTTGGGCGGAAAGAAATGTGAAGGATTCCGCTGCGCGGCCAGAAAGACCGATTAGCATTGTCATTGAAGGTGATAGTCGTACTGGGAAGACGACATGGGCTCGTGCATTGGGGCCGCACAATTATCTCTGCGGCCATTTGGACCTTAGTCCGAAAGTGTATTCCAACGATGCATGGTATAACGTCATTGATGACGTCGATCCGCATTATTTGAAACATTTCAAAGAATTCATGGGCGCACAACGTGACTGGCAAAGTAACGTCAAATACGGAAAGCCCACAATGATTAAAGGTGGTATCCCCACAATCTTTCTCTGCAACCCAGGCAACAAATCTTCTTATAAAGAGTTCCTCGACGAGGAAGCAAATGCATCACTAAAATTGTGGGCTTCCAAGAATGCGGAATTCTACACCATCAAAGAACCATTTTTCACCACCGTCAATCAAAGCGCAACACAGGTGCGCCAAGAAGAAAGCAATTCGACGCAAACGAATTGA |
Protein Sequence | MANSSRFKINAKNYFLTYPRCTLSKEAALEQLLAISTPVNKKFIRICRELHEDGIPHLHVLLQFEGKFQCKNQRFFDLHAETRSTYFHPNIQGAKSSSDVKKYMEKDGDVVDHGEFQIDGRSSRGGKQSANDAYAEAINAGNTSEALVILKEKAPKDFVLYFHNLAKNFDKIFEKSVPVYEPRYSIESFDNVPPYISSWAERNVKDSAARPERPISIVIEGDSRTGKTTWARALGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNVKYGKPTMIKGGIPTIFLCNPGNKSSYKEFLDEEANASLKLWASKNAEFYTIKEPFFTTVNQSATQVRQEESNSTQTN |
NCBI Accession | YP_004123936.1 |
---|---|
Location | 2157-2456 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGAAGATGGCATTCCTCACTTACATGTTCTGCTTCAATTCGAAGGAAAATTCCAGTGCAAAAACCAGAGGTTCTTCGATCTCCATGCCGAAACCAGGTCAACATATTTCCATCCGAACATTCAGGGAGCTAAAAGTAGCTCAGATGTTAAAAAATACATGGAAAAAGACGGAGACGTCGTTGATCATGGAGAATTCCAAATTGATGGTCGATCAAGTCGAGGAGGTAAGCAATCTGCAAACGACGCTTATGCCGAAGCAATCAATGCAGGAAATACCTCTGAGGCGCTCGTTATACTAA |
Protein Sequence | MKMAFLTYMFCFNSKENSSAKTRGSSISMPKPGQHISIRTFRELKVAQMLKNTWKKTETSLIMENSKLMVDQVEEVSNLQTTLMPKQSMQEIPLRRSLY |
NCBI Accession | YP_004123937.1 |
---|---|
Location | 386-1192 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTGTGAAAACACTTATTGTTACAACATAATGAAAATGTTATCTACAAATACTCCTAGCAACAATTGGCGATCTCCCTTTCGTCGCAACACTAATTATCGTCGAGGTGGTCGTATTATGAACACACCATCCAGGTTTAAAATACGGGTTGCTAGGAGATTGTCTTATGGTAAGGTTGAACGACCACTCCAATTTGGAAAATTATGTGAAAAACAACATGGTATCCATATGTCTCTTTCTAGTAATCGTGATATCACGTCATTTATTAGTTATCCTCCATTAAGCTTTGATGGTGATGGTCGTTCAAGGGATTATATTAAATTATTAAGTTTAACTATTTCCGGAATGATAAGTGCAAGGGTTGTATCTGGAGATCAACCTATGGATAATGACATTTATCGCCGCGGAATGTTCGTCATTTCGTTGATTTTAGATCGCAAACCTTATATTGCTGAAGGTGCAAATGAACTGCCGTCATTTGAAGAATTATTTGGTCAGTATTCAGAGAGTTATGTCAATATGCGACTGTTGCCTAGTCGCCAAGATCGTTTCCGTTTGTTAGGAACGATTAAAAAAAATATTAATTGCGACTCTGGAGCGGCAGATGTTAATGTGGGCAAATACATTCGATTTGTTCAAGGTCGTCGGACATTATGGTCAAGATTCAAGGACCCTGACCCTATGGAATCTGGAGGCAATTACCGAAATATTGCAACTAATGCTATATTAGTTAATTATGCATTTATTTCAATGCAACATATTACAGTCAATCCGCTTGTACAATTTGAGTTGAACTATGTTGGATAA |
Protein Sequence | MCENTYCYNIMKMLSTNTPSNNWRSPFRRNTNYRRGGRIMNTPSRFKIRVARRLSYGKVERPLQFGKLCEKQHGIHMSLSSNRDITSFISYPPLSFDGDGRSRDYIKLLSLTISGMISARVVSGDQPMDNDIYRRGMFVISLILDRKPYIAEGANELPSFEELFGQYSESYVNMRLLPSRQDRFRLLGTIKKNINCDSGAADVNVGKYIRFVQGRRTLWSRFKDPDPMESGGNYRNIATNAILVNYAFISMQHITVNPLVQFELNYVG |
NCBI Accession | YP_004123938.1 |
---|---|
Location | 1215-2174 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGATTATAATGGATGGAATTTCTTACGCAGGTTTTGTACCGCATCGCAATTGTTATTTAATAACCATGGAAAATTACACGGGAGTTGTTGCGACAAGCAACTATATTGAATCAAAGCGATGCGAATACAAATTGACAAATGATGATACCGAAATTGCTCTTCAATTTCCAACTTTCCTGGAACAGAAAATGGTCAAACTAATGGGCAAATGCATGAAAATTGATCACGTTGTGATCGAGTATAGGAACCAAGTTCCATTTAACGCCACAGGCACCGTGGTTGTGACCATTTTAGACAAGAGACTTTGCGACGACGAGGCAGCACAAGCTGCATTCACATTTCCCATTGGTTGTAATGTTGATCTACATTATTTCTCCTCTTCATTTTTTTCAGTTAAAGATACATCTCCGTGGCAATTAGTCTACAAGGTAGAAGACTCAAATGTAATACAGGATACGATGTTTGCACAAATTATGGCCAGACTAAAATTATCAACCGCGAAACATTCGACGGATATTCGGTTCAAACCGCCAAGAGTGAAAATCCTATCAAAGGATTTCACACCTGAATGCGTTGATTTTTGGTCTGTTGGACGACCGAAGCCCATTAGACGATTATTAAATCCCAATCCCATTGGTAGGCACGATGGCCCAATTAACAGGCCCATATTATTACAACCAGGTGAAACTTGGACCACTAAATCTCAAATATCAAGAAGCGCATCTATGCGCTATAGCCCAAATTGCAACTTAGGCATTGAACTAAAACCTAGTTCATCTGAAGCGGAGTTCCCACTAAAACATTTACATCAACTACCGGAAGCATCATTAGACCCAGGTGATTCTGTATCACAAACTAATAATTCCTCAATTAGTAGAAAGGAAATTGAGGAAATTATTGAATCTACTGTAAACAAATGTCTTGTATCACAAAAATCAAATGTCAATAAAAAATTATAA |
Protein Sequence | MIIMDGISYAGFVPHRNCYLITMENYTGVVATSNYIESKRCEYKLTNDDTEIALQFPTFLEQKMVKLMGKCMKIDHVVIEYRNQVPFNATGTVVVTILDKRLCDDEAAQAAFTFPIGCNVDLHYFSSSFFSVKDTSPWQLVYKVEDSNVIQDTMFAQIMARLKLSTAKHSTDIRFKPPRVKILSKDFTPECVDFWSVGRPKPIRRLLNPNPIGRHDGPINRPILLQPGETWTTKSQISRSASMRYSPNCNLGIELKPSSSEAEFPLKHLHQLPEASLDPGDSVSQTNNSSISRKEIEEIIESTVNKCLVSQKSNVNKKL |
1 |
Akram M, et al. Virus Genes. 2025 Feb;61(1):110-120. doi: 10.1007/s11262-024-02120-4. Epub 2024 Nov 6. PMID: 39503983 |
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2 |
Dokka N, et al. Plant Dis. 2023 Oct;107(10):2924-2928. doi: 10.1094/PDIS-06-22-1473-SC. Epub 2023 Oct 11. PMID: 36890129 |
3 |
Jyothsna P, et al. Virus Genes. 2011 Jun;42(3):407-14. doi: 10.1007/s11262-011-0580-1. Epub 2011 Feb 12. PMID: 21318241 |
4 |
Akram M, et al. Arch Virol. 2024 Dec 11;170(1):7. doi: 10.1007/s00705-024-06203-3. PMID: 39661203 |
5 |
Simmonds-Gordon RN, et al. Arch Virol. 2014 Oct;159(10):2815-8. doi: 10.1007/s00705-014-2112-5. Epub 2014 May 29. PMID: 24872185 |