Genus | Begomovirus |
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NCBI Assembly | GCF_008802995.1 |
Isolate | Mexico |
Release date | 2018/4/3 |
Submitter | Mauricio-Castillo,J.A., Mendez-Lozano,J., Perea-Araujo,L., Arguello-Astorga,G.R. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009472130.1 |
---|---|
Location | 441-1211 |
Gene Name | BV1 |
Protein Name | BV1 protein |
Coding Region | ATGTATTCGTTTAAGTCTCGACGTGGGTTTTGTTATTCCCAAAGACGATCTTATCCACGTAATTCAGTGTTTAAACGTACAAGCGCTGTTAAACGTGTTGATGTTAAACGTCGAGCTAATCAGGTAAATAAGGTTAATGACGAGTGCAAAATGTCGTCGCAACGTCTACATGAGAACCAATACGGCCCTGAATTTGTTATGGCGCATAATTCAGCTATTTCTACTTTCATTAATTTTCCCCATTTGGGTAAGAATGAACCTAATCGTAGCAGATCATATATTAAGTTGAGACGTCTCCGTTTCAAGGGTACCGTGAAGATTGAGCGTGTTCCTGCTGATATGAATATGGACGGTGTACTTTCGAAGGTTGAAGGTGCTTTCTCCCTTGTTGTTGTGGTTGATCGTAAACCACATTTGAGTTCATCAGGATGTTTGCATACATTTGATGAATTATTTGGTGCAAGAATTCACAGCCATGGAAATTTAGCTATTACCCCCTCTTTGAAGGATCGTTTCTACATTCGTCATGTGTTTAAGCGCGTTTTGTCCGTGGAGAAGGATACTCTGATGGTAGACGTGGAAGGATCTACTTGGTTATCATCTCGGCGTTTTAATTGTTGGTCCACGTTTAAGGATTTGGATCATGATTCATGTAACGGTGTTTATGACAACATTAGTAAAAACGCCATATTAGTTTATTATTGCTGGATGTCAGATGTTGTGTCTAAGGCATCCACATTTGTATCTTTTGACCTTGATTATGTTGGTTGA |
Protein Sequence | MYSFKSRRGFCYSQRRSYPRNSVFKRTSAVKRVDVKRRANQVNKVNDECKMSSQRLHENQYGPEFVMAHNSAISTFINFPHLGKNEPNRSRSYIKLRRLRFKGTVKIERVPADMNMDGVLSKVEGAFSLVVVVDRKPHLSSSGCLHTFDELFGARIHSHGNLAITPSLKDRFYIRHVFKRVLSVEKDTLMVDVEGSTWLSSRRFNCWSTFKDLDHDSCNGVYDNISKNAILVYYCWMSDVVSKASTFVSFDLDYVG |
NCBI Accession | YP_009472131.1 |
---|---|
Location | 1259-2140 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGGATTCCCAGTTAGCAAATCCTCCGAATGCGTTCAATTACATAGAGTCCCATAGGGATGAGTATCAATTATCTCATGACCTAACTGAGATAATCCTTCAATTTCCTTCAACGGCGTCGCAATTATCCGCAAGACACAACCGTAGTTGTATGAAAATCGACCATTGCGTCATAGAATATAGGCAACAAGTTCCGATTAACGCAACAGGTTCGGTCATAGTGGAAATCCATGACAAACGAATGACGGACAACGAATCGTTACAAGCGTCATGGACATTTCCCATTAGATGCAACATAGATCTGCATTACTTCTCCTCGCCATTCTTCTCCCTGAAGGACCCAATTCCATGGAAACTATACTACAGAGTGTCAGATACAAATGTGCATCAAAGGACGCATTTTGCCAAATTCAAAGGCAAACTCAAATTGTCCACGGCGAAACACTCTGTAGACACCCCATTCCGAGCACCCACCGTCAAAATCCTATCCAAACAATTCTCACATAAGGATGTGGATTTTCAACATGTGGACTATGGACGGTGGGAAAGAAAAATCATCAGGTCCACATCAATGTCCAGATTTGGGCTACCAGGCCCAATTGAATTAAAGCCAGGCGACTCATGGGCTTCAAGAAGCACAATTGGACGAACACATACAGATGCGGACTCAGAAGTGGAAAACGCAATACACCCATATCGAGACCTTAATCGATTAGGAGGCAGCGTATTAGACCCAGGTGATTCCGCATCACAAGTAGGGATACAGAGAGCCCAGTCCAACATAACTATGAGTATGGCCCAATTAAACGAGCTGGTTAGGACAACAGTCCAAGAATGTATTAATAGTAATTGTAATCCAGCACCACCGAAGTCATTGAAATAA |
Protein Sequence | MDSQLANPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLSARHNRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSPFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDTPFRAPTVKILSKQFSHKDVDFQHVDYGRWERKIIRSTSMSRFGLPGPIELKPGDSWASRSTIGRTHTDADSEVENAIHPYRDLNRLGGSVLDPGDSASQVGIQRAQSNITMSMAQLNELVRTTVQECINSNCNPAPPKSLK |
NCBI Accession | YP_009472132.1 |
---|---|
Location | 187-942 |
Gene Name | AR1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGGGATGCTCCGTGGCGTTTGATGGCGGGGACCTCAAAGGTGTCCCGTTCTGCCAATTATTCTCCTGGTGCGGGTACGGGCCCTAAATCAAATAGGGCCTCCGCTTGGGTGAATAGGCCCATGTACAGGAAGCCCAGGATTTATCGGATGTACAGATCCCCCGATGTTCCGAAAGGGTGTGAAGGGCCTTGTAAGGTCCAATCGTTTGAATCACGACATGATGTTACCCATGTTGGTAAGGTCCTTTGTATATCCGATATTACACGTGGTAGTGGTATTACCCACCGCGTTGGTAAGCGTTTCTGCGTGAAGTCCGTGTATATCCTAGGCAAAGTATGGATGGACGAGAACATCAAGTTGAAGAACCACACCAACAGCGTCATGTTTTGGTTGGTGAGGGATAGGAGACCATATGGTACCCCTATGGATTTTGGCCAGGTGTTCAACATGTTTGACAATGAACCTAGTACCGCTACTGTTAAGAACGATTTGCGTGACCGTTTTCAAGTTATGCATAAGTTCTATGCCAAGGTTACGGGTGGACAGTATGCGAGCAACGAGCAAGCGCTGGTGAAGCGTTTTTGGAAGGTTAACAATTATGTGGTGTACAATCATCAAGAAGCGGCAAAGTACGAGAATCACACGGAGAACGCTTTGTTATTGTATATGGCGTGTACTCATGCCTCTAATCCTGTGTATGCAACTCTTAAAATTCGGGTCTATTTTTATGACTCGATAATGAATTAA |
Protein Sequence | MPKRDAPWRLMAGTSKVSRSANYSPGAGTGPKSNRASAWVNRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVTHVGKVLCISDITRGSGITHRVGKRFCVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRVYFYDSIMN |
NCBI Accession | YP_009472133.1 |
---|---|
Location | 939-1337 |
Gene Name | AL3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCGCCTCAAGCAACGAATGGCGTTTTTATTTGGGAGGTTCCAAATCCCCTATATTTCAAGATAATCAGAGTGGAGGTCCCATTACACACGCACAGCAAGGTCTTCCACATTCAAATCAGAGCCAACCACAACCTACGGAGAGCGTTGGATCTCCACAAAGCCTTCTTCAATTTCCAAGTCTGGACGACATTGACGACAGCTTCTGGGCAGATTTATTTAAGTAGATTCAAATTACTTGTAATGTCGTATTTAGACAATTTAGGCGTTATTTCAGTTAACAATGTAATTAGAGCTGTTGCATTCGCGACAGATAAACATTATGTAAGCGATGTACTCGAGAATCATGAAATAAAATACAAAATTTATTAA |
Protein Sequence | MDSRTGEPITAPQATNGVFIWEVPNPLYFKIIRVEVPLHTHSKVFHIQIRANHNLRRALDLHKAFFNFQVWTTLTTASGQIYLSRFKLLVMSYLDNLGVISVNNVIRAVAFATDKHYVSDVLENHEIKYKIY |
NCBI Accession | YP_009472134.1 |
---|---|
Location | 1084-1500 |
Gene Name | AL2 |
Protein Name | transactivation protein |
Coding Region | ATGACTGGGCACAACAAAACGCCATCTTCATCACCATTGAGGAACCGTTCTTCACCACTGTCGATCAAGGCTCAACACAGATACGCCAAGAGACAAACGAGGCGTAAAAGAATTGATCTCCAGTGCGGTTGTTCAATATACGTCCACATAAATTGCGCCAATCATGGATTCACGCACAGGGGAACCCATCACTGCGCCTCAAGCAACGAATGGCGTTTTTATTTGGGAGGTTCCAAATCCCCTATATTTCAAGATAATCAGAGTGGAGGTCCCATTACACACGCACAGCAAGGTCTTCCACATTCAAATCAGAGCCAACCACAACCTACGGAGAGCGTTGGATCTCCACAAAGCCTTCTTCAATTTCCAAGTCTGGACGACATTGACGACAGCTTCTGGGCAGATTTATTTAAGTAG |
Protein Sequence | MTGHNKTPSSSPLRNRSSPLSIKAQHRYAKRQTRRKRIDLQCGCSIYVHINCANHGFTHRGTHHCASSNEWRFYLGGSKSPIFQDNQSGGPITHAQQGLPHSNQSQPQPTESVGSPQSLLQFPSLDDIDDSFWADLFK |
NCBI Accession | YP_009472135.1 |
---|---|
Location | 1394-2470 |
Gene Name | AL1 |
Protein Name | replication initiation protein |
Coding Region | ATGCCACTCCCAAAACGCTTTCGCTTAAATGCCAAGAAATACTTCCTCACATATCCTCAATGTTCCATATCTAAAGAAGAGGCGCTCGAGCAAATACAGCGCCTTTCGACTCCAGTAAACAAGAAGTTCATCAAGATATGCAGAGAAACACATGAAGATGGGCAACCTCATCTACACGTGCTCATACAGTTCGAAGGAAAATTCCAGTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACAATTGAATGGGGAGAGTTCCAAATCGACGGCAGATCAGCTAGAGGAGGTCAGCAATCTGCTAATGACACATACGCAAAGGCATTAAACGCAACATCTGCAGAAGCGGCTCTGCAGATCATAAAGGAAGAACAACCCCAACATTTCTTTCTTCAATTTCATAACCTAATCACAAACGCAAACAGGATTTTCCAGAAACCACCGGAACCATGGGTCCCTCCATTTCAACAGTCATCGTTCAATAATGTTCCTCCGATAATTACGCAATGGGTTAATCAAAACGTTTGCGATTCCGCTGCGCGGCCATTGAGACCTATATCAATCGTTATTGAGGGACCATCAAGGACGGGCAAAACACAATGGGCCCGAAGTCTCGGCCCTCACAATTACCTATGTGGTCATCTAGATCTCAATCAAAAAATCTACTCCAATAATGCATGGTATAACGTAATCGATGACGTCAATCCGCATTATCTGAAACACTTTAAGGAGTTCATGGGGGCCCAAAGGGATTGGCAATCGAACTGCAAATACGGAAAGCCAATTCAAATTAAAGGAGGAATTCCCGCTATCTTCCTCTGCAATCCTGGCCCCCATTCATCATATAAGGAGTATCTCAGCAAAGAGAAAAACAAAAGCCTCAATGACTGGGCACAACAAAACGCCATCTTCATCACCATTGAGGAACCGTTCTTCACCACTGTCGATCAAGGCTCAACACAGATACGCCAAGAGACAAACGAGGCGTAA |
Protein Sequence | MPLPKRFRLNAKKYFLTYPQCSISKEEALEQIQRLSTPVNKKFIKICRETHEDGQPHLHVLIQFEGKFQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGQQSANDTYAKALNATSAEAALQIIKEEQPQHFFLQFHNLITNANRIFQKPPEPWVPPFQQSSFNNVPPIITQWVNQNVCDSAARPLRPISIVIEGPSRTGKTQWARSLGPHNYLCGHLDLNQKIYSNNAWYNVIDDVNPHYLKHFKEFMGAQRDWQSNCKYGKPIQIKGGIPAIFLCNPGPHSSYKEYLSKEKNKSLNDWAQQNAIFITIEEPFFTTVDQGSTQIRQETNEA |
NCBI Accession | YP_009472136.1 |
---|---|
Location | 2056-2319 |
Gene Name | AL4 |
Protein Name | AL4 |
Coding Region | ATGAAGATGGGCAACCTCATCTACACGTGCTCATACAGTTCGAAGGAAAATTCCAGTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACAATTGAATGGGGAGAGTTCCAAATCGACGGCAGATCAGCTAGAGGAGGTCAGCAATCTGCTAATGACACATACGCAAAGGCATTAA |
Protein Sequence | MKMGNLIYTCSYSSKENSSARITDSSTWYPQPGQHISIRTYRELNPAPTSSPTSTRMETQLNGESSKSTADQLEEVSNLLMTHTQRH |
1 |
First Report of Rhynchosia golden mosaic virus (RhGMV) Infecting Tobacco in Chiapas, Mexico. Ascencio-Ibáñez JT, et al. Plant Dis. 2002 Jun;86(6):692. doi: 10.1094/PDIS.2002.86.6.692C. PMID: 30823249 |
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2 |
First Report and Characterization of Rhynchosia golden mosaic virus in Honduras. Potter JL, et al. Plant Dis. 2000 Sep;84(9):1045. doi: 10.1094/PDIS.2000.84.9.1045A. PMID: 30832009 |
3 |
Idris AM, et al. Plant Dis. 2002 May;86(5):558. doi: 10.1094/PDIS.2002.86.5.558C. PMID: 30818684 |
4 |
Méndez-Lozano J, et al. Plant Dis. 2006 Jul;90(7):972. doi: 10.1094/PD-90-0972B. PMID: 30781046 |
5 |
Hernández-Zepeda C, et al. Arch Virol. 2010 Oct;155(10):1571-9. doi: 10.1007/s00705-010-0730-0. Epub 2010 Jun 24. PMID: 20574644 |
6 |
Two novel begomoviruses belonging to different lineages infecting Rhynchosia minima. Fiallo-Olivé E, et al. Arch Virol. 2010 Dec;155(12):2053-8. doi: 10.1007/s00705-010-0803-0. Epub 2010 Sep 18. PMID: 20852903 |
7 |
Paz-Carrasco LC, et al. Arch Virol. 2014 Aug;159(8):2127-32. doi: 10.1007/s00705-014-2046-y. Epub 2014 Mar 13. PMID: 24623091 |
8 |
Rodriguez RL, et al. Plant Dis. 2001 Oct;85(10):1119. doi: 10.1094/PDIS.2001.85.10.1119C. PMID: 30823289 |
9 |
Simmonds-Gordon RN, et al. Arch Virol. 2014 Oct;159(10):2815-8. doi: 10.1007/s00705-014-2112-5. Epub 2014 May 29. PMID: 24872185 |
10 |
A New Tomato-Infecting Begomovirus in Barbados. Roye ME, et al. Plant Dis. 2000 Dec;84(12):1342. doi: 10.1094/PDIS.2000.84.12.1342A. PMID: 30831878 |