Premna leaf curl virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_002823225.1 |
| Isolate | Viet Nam |
| Release date | 2018/8/25 |
| Submitter | She,X., He,Z., Brown,J.K. |
| Host | |
| Vector | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_038454
Gene Information
| NCBI Accession | YP_009506448.1 |
|---|---|
| Location | 133-501 |
| Gene Name | av2 |
| Protein Name | AV2 |
| Coding Region | ATGTGGGATCCACTTGAGAACGAATTCCCAGATACGGTGCACGGTCTACGGTGTATGCTGGCCGTAAAATACTGTCAACTTATTGAAGATACATACGCTCCAGATACGTTGGGCTACGATCTTATACGTGACTTGATCCTTGTTATTCGAGCACGTAGCTATGTCGAAGCGACCCGCAGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGTCGCAGGCTGAACTTCGAGTCCCCAGGAATGAGCCGTGCCACTGTCCCCACTGTCCTCGTCACAAACAGAAGGAGGATGTGGGCCAACAGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCAAAGGGCTGTGA |
| Protein Sequence | MWDPLENEFPDTVHGLRCMLAVKYCQLIEDTYAPDTLGYDLIRDLILVIRARSYVEATRRYSHFNSRLEGTSQAELRVPRNEPCHCPHCPRHKQKEDVGQQAHVPKAQDVQDVQKPRCSKGL |
| NCBI Accession | YP_009506449.1 |
|---|---|
| Location | 178-627 |
| Gene Name | ac5 |
| Protein Name | AC5 |
| Coding Region | ATGCAAAACCTCTTCCCTACACGATGGGTCAGCCCATTACCACGAGTGACATCCGAAATACAAATGACCTTGCCTGTATGGGCCACATCATGTCGCTGTTCAAATGACTGGACCTTACATGGGCCTTCACAGCCCTTTGGAACATCTGGGCTTCTGTACATCCTGTACATCCTGGGCTTTCGGTACATGGGCCTGTTGGCCCACATCCTCCTTCTGTTTGTGACGAGGACAGTGGGGACAGTGGCACGGCTCATTCCTGGGGACTCGAAGTTCAGCCTGCGACGTACCTTCGAGGCGGGAGTTGAAATGACTATATCTGCGGGTCGCTTCGACATAGCTACGTGCTCGAATAACAAGGATCAAGTCACGTATAAGATCGTAGCCCAACGTATCTGGAGCGTATGTATCTTCAATAAGTTGACAGTATTTTACGGCCAGCATACACCGTAG |
| Protein Sequence | MQNLFPTRWVSPLPRVTSEIQMTLPVWATSCRCSNDWTLHGPSQPFGTSGLLYILYILGFRYMGLLAHILLLFVTRTVGTVARLIPGDSKFSLRRTFEAGVEMTISAGRFDIATCSNNKDQVTYKIVAQRIWSVCIFNKLTVFYGQHTP |
| NCBI Accession | YP_009506450.1 |
|---|---|
| Location | 293-1066 |
| Gene Name | av1 |
| Protein Name | AV1 |
| Coding Region | ATGTCGAAGCGACCCGCAGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGTCGCAGGCTGAACTTCGAGTCCCCAGGAATGAGCCGTGCCACTGTCCCCACTGTCCTCGTCACAAACAGAAGGAGGATGTGGGCCAACAGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCAAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAACAGCGACATGATGTGGCCCATACAGGCAAGGTCATTTGTATTTCGGATGTCACTCGTGGTAATGGGCTGACCCATCGTGTAGGGAAGAGGTTTTGCATTAAGTCCGTTTATGTGTTGGGTAAAATCTGGATGGATGAAAACATCAAGGTTAAAAACCACACCAACACTTGTATGTTCTTTGTTGTTAGGGATAGAAGGCCATATGGCACTCCTATGGATTTTGGTCAGGTGTTCAACATGTATGACAATGAGCCCAGTACAGCCACTGTGAAGAACGATCTCAGGGATCGTTTTCAAGTTCTACGCCGTTTTGCAGGAACTGTGACAGGTGGTCAGTATGCTTCCAAGGAGCAGGCTTTGGTTAGGAAGTTCATGAGGGTCAACAATCATGTGGTGTATAACCATCAAGAAACTGCAAAGTATGAGAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACACATGCAAGTAATCCATTGTATGCAACCATGAAGATCAGGATCTATTTTTATGATTCTGTTCAAAATTAA |
| Protein Sequence | MSKRPADIVISTPASKVRRRLNFESPGMSRATVPTVLVTNRRRMWANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEQRHDVAHTGKVICISDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKVKNHTNTCMFFVVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRFQVLRRFAGTVTGGQYASKEQALVRKFMRVNNHVVYNHQETAKYENHTENALLLYMACTHASNPLYATMKIRIYFYDSVQN |
| NCBI Accession | YP_009506451.1 |
|---|---|
| Location | 1063-1467 |
| Gene Name | ac3 |
| Protein Name | AC3 |
| Coding Region | ATGGATTCTCGCACAGGGGAGTACATCACTGCAGCTCAAGCAAAGAGTGGCGTGTATACCTGGACGCTCAGAAATCCCCTCTATTTCAAGATAACCAACCACATACACAACACATTCATGACAAACAGAGACATCATAACAGTCCAGGTCCAGTTCAACCACAACCTGAGGAAAGCGTTGGGGATACACCAGTGTTTTCTGACCTGCCAGATCTGGACTCGTTTACATCCTCAGACCTGGCATTTCTTAAGGGTTTTTAAGTATCAATGTATGAAGTATTTAGATAGATTAGGAGTGATTAGTATTAACAATGTAATTAGGGCTTTTTCTCATGTGTTATACGATGTACTTGAGGGCACAATTGATGCTCAATTAGCAAATATAATAAAATTTAACGTTTATTAA |
| Protein Sequence | MDSRTGEYITAAQAKSGVYTWTLRNPLYFKITNHIHNTFMTNRDIITVQVQFNHNLRKALGIHQCFLTCQIWTRLHPQTWHFLRVFKYQCMKYLDRLGVISINNVIRAFSHVLYDVLEGTIDAQLANIIKFNVY |
| NCBI Accession | YP_009506452.1 |
|---|---|
| Location | 1208-1615 |
| Gene Name | ac2 |
| Protein Name | AC2 |
| Coding Region | ATGCAGAATTCATCACCCTCACGCAACCATTGTACTCAGGTACCCATCAAGGTCCAACACAAGATATCCAAGCAGAGACCACCACGGAGACGCAGAATTGATCTCCCGTGCGGCTGCTCATACTATCTTGGACTAAACTGCGCATCACATGGATTCTCGCACAGGGGAGTACATCACTGCAGCTCAAGCAAAGAGTGGCGTGTATACCTGGACGCTCAGAAATCCCCTCTATTTCAAGATAACCAACCACATACACAACACATTCATGACAAACAGAGACATCATAACAGTCCAGGTCCAGTTCAACCACAACCTGAGGAAAGCGTTGGGGATACACCAGTGTTTTCTGACCTGCCAGATCTGGACTCGTTTACATCCTCAGACCTGGCATTTCTTAAGGGTTTTTAA |
| Protein Sequence | MQNSSPSRNHCTQVPIKVQHKISKQRPPRRRRIDLPCGCSYYLGLNCASHGFSHRGVHHCSSSKEWRVYLDAQKSPLFQDNQPHTQHIHDKQRHHNSPGPVQPQPEESVGDTPVFSDLPDLDSFTSSDLAFLKGF |
| NCBI Accession | YP_009506453.1 |
|---|---|
| Location | 1515-2603 |
| Gene Name | ac1 |
| Protein Name | AC1 |
| Coding Region | ATGGCTCCCCCTAAAAAATTTAAAATAAATGCCAAAAATTATTTTCTCACATACCCTCAGTGTTCACTAACCAAAGAGGAAGCACTTTCCCAATTGCAAAACCTAAATACCCCAACAAACAAAAAATACATTAAGATTTGCAGAGAATTACATGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAGGGCAAATACCAATGCCAAAATCCACGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTACCATCCAAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTACATCGATAAGGACGGCGACACCCTCGATTGGGGCGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCCAGGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTAATTAGGGAATTAGCCCCTAAAGATTATGTTTTACAATTCCATAATTTAACTGCCAATTTAGATAGGATTTTTCAAGCTCCTGTAGAAGTATTTGTTAGTCCTTTTTTGTCTTCTTCATTTGATCAAGTTCCAGAGGAACTTGAAGTCTGGGTGTCTGAAAACGTCATGGGTGCCGCTGCGCGGCCATGGAGGCCCAAGAGTATTGTAATAGAGGGTGATAGTCGTACAGGGAAAACCATGTGGGCCAGATCACTAGGCCCACATAATTATTTATGTGGCCACCTAGATCTAAGCCCAAAGGTGTACAGTAATGATGCCTGGTACAACGTCATTGATGACGTCGACCCCCACTATCTAAAGCACTTCAAGGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACGAAGTACGGGAAACCAATTCAAATTAAAGGTGGTATCCCAACAATCTTCCTCTGCAATCCAGGACCCACGTCATCATATAAAGAGTACTTGGACGAGGATAAGAATTCAGCACTCAAAGACTGGTCCATCAAGAATGCAGAATTCATCACCCTCACGCAACCATTGTACTCAGGTACCCATCAAGGTCCAACACAAGATATCCAAGCAGAGACCACCACGGAGACGCAGAATTGA |
| Protein Sequence | MAPPKKFKINAKNYFLTYPQCSLTKEEALSQLQNLNTPTNKKYIKICRELHEDGSPHLHVLIQFEGKYQCQNPRFFDLVSPTRSAHYHPNIQGAKSSSDVKSYIDKDGDTLDWGEFQIDGRSARGGQQSANDAYAQALNTGSKSEALNVIRELAPKDYVLQFHNLTANLDRIFQAPVEVFVSPFLSSSFDQVPEELEVWVSENVMGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKDWSIKNAEFITLTQPLYSGTHQGPTQDIQAETTTETQN |
| NCBI Accession | YP_009506454.1 |
|---|---|
| Location | 2156-2452 |
| Gene Name | ac4 |
| Protein Name | AC4 |
| Coding Region | ATGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAGGGCAAATACCAATGCCAAAATCCACGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTACCATCCAAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTACATCGATAAGGACGGCGACACCCTCGATTGGGGCGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCCAGGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTAA |
| Protein Sequence | MKMGALISMCSSSSRANTNAKIHDSSTWYPQPGQHITIQTFRELNQARTSSPTSIRTATPSIGASFRSMDDLQEGDNNQPMMLTPRRLTQAVSQRLLM |
References More References in PubMed
| 1 |
Cotton leaf curl virus disease. Briddon RW, et al. Virus Res. 2000 Nov;71(1-2):151-9. doi: 10.1016/s0168-1702(00)00195-7. PMID: 11137169 |
|---|---|
| 2 |
Chen N, et al. J Exp Bot. 2024 Sep 27;75(18):5819-5838. doi: 10.1093/jxb/erae257. PMID: 38829390 |
| 3 |
Tomato Yellow Leaf Curl Sardinia Virus Increases Drought Tolerance of Tomato. Sacco Botto C, et al. Int J Mol Sci. 2023 Feb 2;24(3):2893. doi: 10.3390/ijms24032893. PMID: 36769211 |
| 4 |
Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops. Moriones E, et al. Viruses. 2017 Sep 21;9(10):264. doi: 10.3390/v9100264. PMID: 28934148 |
| 5 |
Tomato Yellow Leaf Curl Virus (TYLCV) Promotes Plant Tolerance to Drought. Shteinberg M, et al. Cells. 2021 Oct 25;10(11):2875. doi: 10.3390/cells10112875. PMID: 34831098 |
| 6 |
Detection of Tomato Leaf Curl New Delhi Virus-ES by Real-Time Quantitative PCR. Janssen D, et al. Methods Mol Biol. 2025;2912:145-156. doi: 10.1007/978-1-0716-4454-6_12. PMID: 40064778 |
| 7 |
Replication of Tomato Yellow Leaf Curl Virus in Its Whitefly Vector, Bemisia tabaci. Pakkianathan BC, et al. J Virol. 2015 Oct;89(19):9791-803. doi: 10.1128/JVI.00779-15. Epub 2015 Jul 15. PMID: 26178995 |
| 8 |
Ascencio-Ibáñez JT, et al. Plant Physiol. 2008 Sep;148(1):436-54. doi: 10.1104/pp.108.121038. Epub 2008 Jul 23. PMID: 18650403 |
| 9 |
Tomato yellow leaf curl virus, an emerging virus complex causing epidemics worldwide. Moriones E, et al. Virus Res. 2000 Nov;71(1-2):123-34. doi: 10.1016/s0168-1702(00)00193-3. PMID: 11137167 |
| 10 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |