Pouzolzia mosaic Guangdong virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823205.1
Isolate China: Guangdong
Release date 2018/8/25
Submitter Tang,Y.F., Du,Z.G., He,Z.F., Brown,J.K., She,X.M.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038453
ACCGGATGGCCGCGATTTTTTTTTTGAGTGGTCCCCCCCACTAATTGTTGTCGGCCAATAGAAACGCTCCCTCAAAGTCTAATTGTTGGTGCGCATTCCTATAAAGAACTTGTCCACCAAGTTCGAATTAAAAATGTGGGATCCTTTGGTCAACGAGTTTCCCGAGACCGTGCACGGTCTCCGGTGTATGTTAGCTATAAAATATCTCTTGGAAATTGAAAAAACCTACGCGCCAGATACCCTAGGGTACGATCTCATACGTGATTTAATTCTCGTAATCCGTGCCCGGAAATATGACGAAGCGTCCCGCCGATATAGTCATTTCAACTCCCGCCTCGAAAGTACGTCGCCGACTGAATTACGACACTCCAGGTGTCAACCGTGCAACTGTCCCCACTGTCCTCGTCACAAATCGAAAGAAAGCATGGACTTACAGGCCCAGTTACCGAAAGCCCAAGATGTACAGGATGTATAAAAGCCCAGACGTCCCTCGCGGGTGCGAGGGCCCATGCAAGGTCCAGTCTTATGAACAGCGACATGATATAGCCCACACTGGGAAAGTCATATGCATATCTGACGTTACGCGTGGTGGTGGCCTGACCCATCGCACAGGGAAGAGGTTTTGTGTTAAGTCCGTTTATATTATCGGCAAGGTGTGGATGGATGAAAACATCAAGACAAAGAATCACACCAACACTGTCATGTTTTTTCTCGTCAGAGATCGAAGACCGTATGGAACTCCTATGGATTTTGGTCAGGTTTTCAACATGTACGACAATGAACCTAGTACGGCTACTGTCAAAAACGATCTTCGCGATCGTTATCAAGTGATGCGTCGTTTTTCAGCATCTGTAACCGGGGGTCAATACGCGTGCAAGGAACAGGCTATAGTTAGGAAGTTTTTTACAGTTAATAATCATGTCGTTTATAACCATCAAGAAGCGGCGAAGTATGATAACCATACTGAAAACGCCATGTTATTGTATATGGCATGTACTCATGCTAGCAATCCTGTGTATGCGACTTTAAAAATACGAATCTATTTCTATGATTCGATTCAAAATTAATAAAGATTAAATTTTATTATAGTTGAAAGTTGTACATCGATAGTCTTTTCCAATACATTATTCAATACATGATTTACAGATCTAATTACATTGTTAATACTAACAATCCCTAAATTGTTCAAATGTTCCATACATTGAACCCTAAATACTCTTAAGAAACGCCCAGTCTGAGGTCGTAAATGAGTCCAGATCTGGAAGATCAAGAAACATTGGTGAAGTCCCAACGCTCTCCTCAGGTTGTGGTTGAATTGGATCTGGATTGTTATGATGTCGTGGTTCGTTAGTGACGGTCGTTGTTCGTGGTTGATTATCTTGAAATAGAGGGGATTTGGCACCGTCCAGATAAACGCGCCATTCTCTGCTTGAGTTGCAGTGATGAGTTCCCCGGTGCGTGAATCCATGATTCGCACAGTCGATTGAGTAGTAATAAGTACATCCACAAGGAAGATCAACTCTCCTTCGCCTGATTGATTTCTTTTTACAAAGTCTATGCTTGACTTTGATTGGAATTTGAGTAGAGTGGCCCGCTGATGGTGACGAAGAGCGCATTTTTTAATGCCCACTCTTTTAATGCGAGGTTCTTTTCCTCGTCTAGAAACTCTTTATAAGAAGATGTCGGGCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTTATTTGAATGGGTTTCCCATATTTCGTATTGCTTTGCCAGTCTCTCTGGGCCCCCATGAATTCTTTAAAATGCTTTAGATAGTGGGGATCAACGTCATCAATRACGTTATACCAGGCATCATTGCTAAACACCTTTGGACTGAGATCAAGGTGTCCACACAGATAATTATGTGGTCCTAATGACCTAGCCCATACTGTTTTTCCTGTACGACTACTGCCTTCAATTACAATTGATTTAGGTCTAATAGGCCGCGCAGCGGGACCCATAACATTATCGGAAACCCAGCATTCAATTTCTTCTGGGACTAGATCGAAAGAAGAAGATAAGAAAGGACACCTAAAAACCTCTAAAGGAGGTGCAAAAATTTTATCTAAATTTGAATTTAAATTATGAAATTGAAATAAATACTCTTTCGGGAGTTTCTCCCTTATTATCGCTAAAGCAGCTTCTTTTGAACCTGCATTTAACGCCTCTGCACATGCGTCGTTAGCAGTCTGGCAGCCTCCTCTAGCACTTCGTCCGTCAACCTGGAACTGACCCCATTCAATGGTGTCTCCATCTTTGTCGATGTAGGACTTGACATCGGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTTGTTGTGGAGACCAGGTCGAAGAATCTCTGATTCGTGCAGTTGTATTTGCCTTCGAACTGTAATAGCACGTGGAGATGAGGAGACCCATCTTCGTGAAGTTCTCGACAGATCTTGATATATTTTTTGTTCGTCGGGGTTATTAGATTCTGCAATTGGGAAAGTGCCTCTTCTTTAGAGAGAGAACACTGAGGATAAGTGAGGAAATAGTTTTTTGCTTTAATAGAAAACCTCCCAGCACGTGGCATTTTGGTATCGGGGGGCACTCAAAGTCCTAGCAATCGGGGGAACTGGGGGGCAATTTATATGGTGCCCCCCAAATGGCACAATTGTAAATATGTAGAAGAATTTAAAATTCCCAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009506442.1
Location 134-475
Protein Name AV2 protein
Coding Region ATGTGGGATCCTTTGGTCAACGAGTTTCCCGAGACCGTGCACGGTCTCCGGTGTATGTTAGCTATAAAATATCTCTTGGAAATTGAAAAAACCTACGCGCCAGATACCCTAGGGTACGATCTCATACGTGATTTAATTCTCGTAATCCGTGCCCGGAAATATGACGAAGCGTCCCGCCGATATAGTCATTTCAACTCCCGCCTCGAAAGTACGTCGCCGACTGAATTACGACACTCCAGGTGTCAACCGTGCAACTGTCCCCACTGTCCTCGTCACAAATCGAAAGAAAGCATGGACTTACAGGCCCAGTTACCGAAAGCCCAAGATGTACAGGATGTATAA
Protein Sequence MWDPLVNEFPETVHGLRCMLAIKYLLEIEKTYAPDTLGYDLIRDLILVIRARKYDEASRRYSHFNSRLESTSPTELRHSRCQPCNCPHCPRHKSKESMDLQAQLPKAQDVQDV

NCBI Accession YP_009506443.1
Location 294-1067
Protein Name coat protein
Coding Region ATGACGAAGCGTCCCGCCGATATAGTCATTTCAACTCCCGCCTCGAAAGTACGTCGCCGACTGAATTACGACACTCCAGGTGTCAACCGTGCAACTGTCCCCACTGTCCTCGTCACAAATCGAAAGAAAGCATGGACTTACAGGCCCAGTTACCGAAAGCCCAAGATGTACAGGATGTATAAAAGCCCAGACGTCCCTCGCGGGTGCGAGGGCCCATGCAAGGTCCAGTCTTATGAACAGCGACATGATATAGCCCACACTGGGAAAGTCATATGCATATCTGACGTTACGCGTGGTGGTGGCCTGACCCATCGCACAGGGAAGAGGTTTTGTGTTAAGTCCGTTTATATTATCGGCAAGGTGTGGATGGATGAAAACATCAAGACAAAGAATCACACCAACACTGTCATGTTTTTTCTCGTCAGAGATCGAAGACCGTATGGAACTCCTATGGATTTTGGTCAGGTTTTCAACATGTACGACAATGAACCTAGTACGGCTACTGTCAAAAACGATCTTCGCGATCGTTATCAAGTGATGCGTCGTTTTTCAGCATCTGTAACCGGGGGTCAATACGCGTGCAAGGAACAGGCTATAGTTAGGAAGTTTTTTACAGTTAATAATCATGTCGTTTATAACCATCAAGAAGCGGCGAAGTATGATAACCATACTGAAAACGCCATGTTATTGTATATGGCATGTACTCATGCTAGCAATCCTGTGTATGCGACTTTAAAAATACGAATCTATTTCTATGATTCGATTCAAAATTAA
Protein Sequence MTKRPADIVISTPASKVRRRLNYDTPGVNRATVPTVLVTNRKKAWTYRPSYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDIAHTGKVICISDVTRGGGLTHRTGKRFCVKSVYIIGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRYQVMRRFSASVTGGQYACKEQAIVRKFFTVNNHVVYNHQEAAKYDNHTENAMLLYMACTHASNPVYATLKIRIYFYDSIQN

NCBI Accession YP_009506444.1
Location 1064-1468
Protein Name AC3 protein
Coding Region ATGGATTCACGCACCGGGGAACTCATCACTGCAACTCAAGCAGAGAATGGCGCGTTTATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATAATCAACCACGAACAACGACCGTCACTAACGAACCACGACATCATAACAATCCAGATCCAATTCAACCACAACCTGAGGAGAGCGTTGGGACTTCACCAATGTTTCTTGATCTTCCAGATCTGGACTCATTTACGACCTCAGACTGGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGGAACATTTGAACAATTTAGGGATTGTTAGTATTAACAATGTAATTAGATCTGTAAATCATGTATTGAATAATGTATTGGAAAAGACTATCGATGTACAACTTTCAACTATAATAAAATTTAATCTTTATTAA
Protein Sequence MDSRTGELITATQAENGAFIWTVPNPLYFKIINHEQRPSLTNHDIITIQIQFNHNLRRALGLHQCFLIFQIWTHLRPQTGRFLRVFRVQCMEHLNNLGIVSINNVIRSVNHVLNNVLEKTIDVQLSTIIKFNLY

NCBI Accession YP_009506445.1
Location 1209-1616
Protein Name AC2 protein
Coding Region ATGCGCTCTTCGTCACCATCAGCGGGCCACTCTACTCAAATTCCAATCAAAGTCAAGCATAGACTTTGTAAAAAGAAATCAATCAGGCGAAGGAGAGTTGATCTTCCTTGTGGATGTACTTATTACTACTCAATCGACTGTGCGAATCATGGATTCACGCACCGGGGAACTCATCACTGCAACTCAAGCAGAGAATGGCGCGTTTATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATAATCAACCACGAACAACGACCGTCACTAACGAACCACGACATCATAACAATCCAGATCCAATTCAACCACAACCTGAGGAGAGCGTTGGGACTTCACCAATGTTTCTTGATCTTCCAGATCTGGACTCATTTACGACCTCAGACTGGGCGTTTCTTAAGAGTATTTAG
Protein Sequence MRSSSPSAGHSTQIPIKVKHRLCKKKSIRRRRVDLPCGCTYYYSIDCANHGFTHRGTHHCNSSREWRVYLDGAKSPLFQDNQPRTTTVTNEPRHHNNPDPIQPQPEESVGTSPMFLDLPDLDSFTTSDWAFLKSI

NCBI Accession YP_009506446.1
Location 1555-2604
Protein Name Rep protein
Coding Region ATGCCACGTGCTGGGAGGTTTTCTATTAAAGCAAAAAACTATTTCCTCACTTATCCTCAGTGTTCTCTCTCTAAAGAAGAGGCACTTTCCCAATTGCAGAATCTAATAACCCCGACGAACAAAAAATATATCAAGATCTGTCGAGAACTTCACGAAGATGGGTCTCCTCATCTCCACGTGCTATTACAGTTCGAAGGCAAATACAACTGCACGAATCAGAGATTCTTCGACCTGGTCTCCACAACAAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATCGACAAAGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTTGACGGACGAAGTGCTAGAGGAGGCTGCCAGACTGCTAACGACGCATGTGCAGAGGCGTTAAATGCAGGTTCAAAAGAAGCTGCTTTAGCGATAATAAGGGAGAAACTCCCGAAAGAGTATTTATTTCAATTTCATAATTTAAATTCAAATTTAGATAAAATTTTTGCACCTCCTTTAGAGGTTTTTAGGTGTCCTTTCTTATCTTCTTCTTTCGATCTAGTCCCAGAAGAAATTGAATGCTGGGTTTCCGATAATGTTATGGGTCCCGCTGCGCGGCCTATTAGACCTAAATCAATTGTAATTGAAGGCAGTAGTCGTACAGGAAAAACAGTATGGGCTAGGTCATTAGGACCACATAATTATCTGTGTGGACACCTTGATCTCAGTCCAAAGGTGTTTAGCAATGATGCCTGGTATAACGTYATTGATGACGTTGATCCCCACTATCTAAAGCATTTTAAAGAATTCATGGGGGCCCAGAGAGACTGGCAAAGCAATACGAAATATGGGAAACCCATTCAAATAAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGCCCGACATCTTCTTATAAAGAGTTTCTAGACGAGGAAAAGAACCTCGCATTAAAAGAGTGGGCATTAAAAAATGCGCTCTTCGTCACCATCAGCGGGCCACTCTACTCAAATTCCAATCAAAGTCAAGCATAG
Protein Sequence MPRAGRFSIKAKNYFLTYPQCSLSKEEALSQLQNLITPTNKKYIKICRELHEDGSPHLHVLLQFEGKYNCTNQRFFDLVSTTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGQFQVDGRSARGGCQTANDACAEALNAGSKEAALAIIREKLPKEYLFQFHNLNSNLDKIFAPPLEVFRCPFLSSSFDLVPEEIECWVSDNVMGPAARPIRPKSIVIEGSSRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNLALKEWALKNALFVTISGPLYSNSNQSQA

NCBI Accession YP_009506447.1
Location 2190-2447
Protein Name AC4 protein
Coding Region ATGGGTCTCCTCATCTCCACGTGCTATTACAGTTCGAAGGCAAATACAACTGCACGAATCAGAGATTCTTCGACCTGGTCTCCACAACAAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATCGACAAAGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTTGACGGACGAAGTGCTAGAGGAGGCTGCCAGACTGCTAACGACGCATGTGCAGAGGCGTTAA
Protein Sequence MGLLISTCYYSSKANTTARIRDSSTWSPQQGQHISIRTFRELNQAPMSSPTSTKMETPLNGVSSRLTDEVLEEAARLLTTHVQRR

References More References in PubMed

1

Identification and molecular characterization of two begomoviruses from Pouzolzia zeylanica (L.) Benn. exhibiting yellow mosaic symptoms in adjacent regions of China and Vietnam.

Tang YF, et al.  Arch Virol. 2014 Oct;159(10):2799-803. doi: 10.1007/s00705-014-2049-8. Epub 2014 May 18.

PMID: 24838912

2

Molecular characterization of a novel monopartite begomovirus isolated from Pouzolzia zeylanica in China.

Tang YF, et al.  Arch Virol. 2013 Jul;158(7):1617-20. doi: 10.1007/s00705-013-1632-8. Epub 2013 Mar 5.

PMID: 23462887