Pepper yellow leaf curl virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000905155.1
Isolate China
Release date 2015/2/22
Submitter Ruan,T., Qing,L.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_020236
ACCGGATGGCCGCGCAATTTTTTTAAAATGGACCCCGCATTTGCGTATGTCCACTCATGGCCGCTCCTCAAAGCTTATTTATTAAATGGTCCCCTATAAAACTTAGGCCCCAAGTATTTACGTTAAACATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTGCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGACCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTCTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAATTTTATTTCTGAATCCATGTCTACATACATAGTTTGTTCTATTTTTTTCCATAATACATGATTTACAGCTCTAATAATTGAGTTAATTGAAATTACACCTAGATTGTTTAGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCTGAGGGTGTAAGGTCGTCCAGATTCGGTATGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGACGTGGTTGAGGATCTTGAAATAAAGGGGATTTTTGACCGTCCAAATATAAACGCCATTCTCTGCTTGAGCTGCAGTGAGTAGTTCCCCTGTGCGCGAATCCATGGTTGAAGCAGTTTAATGATAGAAAATAAGAACACCCGCATTCAAGATCGACTCTCCTCCTCCTGTTGCGTTTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCTTGGAGGGTGACGAAGATCGCATTCTTTAGAGCCCAATTCTTTAGTGCGGTGTTCTTTTCCTCGTCGAGGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTATTTAGTGTTTGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGCTTGAGGAAGTGCGGGTCGACGTCATCAATGACGTTGAACCAAGCATCATTACTGTATACCTTTGGACTCAGATCTAAATGACCACACAGATAGTTGTGTGGGCCTAGTGACCTAGCCCACATCGTCTTCCCGGTTCTACTATCTCCCTCAATGACTATACTTTGAGGTCTTAAAGGCCGCGCAGCGGCATTGACGACGTTATGGGCCGCCCATTCATCAAGTTCTTCTGGAACTTGGTCAAAAGAAGAAGAAGAAAAAGGAGAAATATATTCCTCCATTGGAGGAGTAAAAATCCTATCTAAATTAGATTTTAAATTATGATACTGAAAAATATAATCTTTCGGGAGTTTCTCCCGAATGACAGCCATAGCGGCTTCAACGGAGCCTGTGTTTAGGGCCTCTGCAGCAGCATCATTAGCTGTCTGTTGACCTCCTCGTGCAGATCTTCCATCGATCTGAAAACTACCCCAGTTGATGTAATCACCGTCCTTTTTGATGTAGGACTTGACGTCCGAGCTGGACTTAGCTCCCTGGAAGTTTGGGTGGTATTGGGTGGAGGTATTAGGGTGTGTGATGTCGAAATGTCTGGGATTACGGAACTGGGCTTTACCTTTGAATTGGATGAGCACATGGAGATGCAGTGACCCATTCTTATGTTTTTCTTGTGCTACTCGTATGAATAATTTATCGGATGGGCATGCTATTTGTTGGATAAGTTCTAGGGCTTGCTCTTTCGGAATGGGACATTTGGGATAAGTGAGAAAGATATTTTTTGCTTTCACTTGGAATGAATTAAGACGAGGCATTTTGACCGAGTGAATTGGGTGCTCTCCAAAGTTCTATAGAATGGGGGGCTTTGGGTGCCTATTTATACCGAGCACCCAAATGGCAATATTGTAATTCCCAAACGAAATTCAAAATTCAAAATTCTAAATCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_007419079.1
Location 129-467
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTGCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAG
Protein Sequence MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIRELISILRARNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHESQAQNVQDV

NCBI Accession YP_007419080.1
Location 289-1059
Gene Name AV1
Protein Name AV1 protein
Coding Region ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGACCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTCTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAA
Protein Sequence MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWANRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_007419081.1
Location 1056-1460
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCGCGCACAGGGGAACTACTCACTGCAGCTCAAGCAGAGAATGGCGTTTATATTTGGACGGTCAAAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATCTAGGTGTAATTTCAATTAACTCAATTATTAGAGCTGTAAATCATGTATTATGGAAAAAAATAGAACAAACTATGTATGTAGACATGGATTCAGAAATAAAATTTAATATTTATTAA
Protein Sequence MDSRTGELLTAAQAENGVYIWTVKNPLYFKILNHVNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNLGVISINSIIRAVNHVLWKKIEQTMYVDMDSEIKFNIY

NCBI Accession YP_007419082.1
Location 1153-1605
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGAATGCGGGTGTTCTTATTTTCTATCATTAAACTGCTTCAACCATGGATTCGCGCACAGGGGAACTACTCACTGCAGCTCAAGCAGAGAATGGCGTTTATATTTGGACGGTCAAAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATCTAGGTGTAATTTCAATTAA
Protein Sequence MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYFLSLNCFNHGFAHRGTTHCSSSREWRLYLDGQKSPLFQDPQPRQPSIHDEHGHHNNKDPIQLQPSESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQSRCNFN

NCBI Accession YP_007419083.1
Location 1502-2593
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGCCTCGTCTTAATTCATTCCAAGTGAAAGCAAAAAATATCTTTCTCACTTATCCCAAATGTCCCATTCCGAAAGAGCAAGCCCTAGAACTTATCCAACAAATAGCATGCCCATCCGATAAATTATTCATACGAGTAGCACAAGAAAAACATAAGAATGGGTCACTGCATCTCCATGTGCTCATCCAATTCAAAGGTAAAGCCCAGTTCCGTAATCCCAGACATTTCGACATCACACACCCTAATACCTCCACCCAATACCACCCAAACTTCCAGGGAGCTAAGTCCAGCTCGGACGTCAAGTCCTACATCAAAAAGGACGGTGATTACATCAACTGGGGTAGTTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAGGCCCTAAACACAGGCTCCGTTGAAGCCGCTATGGCTGTCATTCGGGAGAAACTCCCGAAAGATTATATTTTTCAGTATCATAATTTAAAATCTAATTTAGATAGGATTTTTACTCCTCCAATGGAGGAATATATTTCTCCTTTTTCTTCTTCTTCTTTTGACCAAGTTCCAGAAGAACTTGATGAATGGGCGGCCCATAACGTCGTCAATGCCGCTGCGCGGCCTTTAAGACCTCAAAGTATAGTCATTGAGGGAGATAGTAGAACCGGGAAGACGATGTGGGCTAGGTCACTAGGCCCACACAACTATCTGTGTGGTCATTTAGATCTGAGTCCAAAGGTATACAGTAATGATGCTTGGTTCAACGTCATTGATGACGTCGACCCGCACTTCCTCAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCAAACACTAAATACGGGAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTCTGCAATCCTGGTCCCAACAGCAGTTATAAAGAATTCCTCGACGAGGAAAAGAACACCGCACTAAAGAATTGGGCTCTAAAGAATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGA
Protein Sequence MPRLNSFQVKAKNIFLTYPKCPIPKEQALELIQQIACPSDKLFIRVAQEKHKNGSLHLHVLIQFKGKAQFRNPRHFDITHPNTSTQYHPNFQGAKSSSDVKSYIKKDGDYINWGSFQIDGRSARGGQQTANDAAAEALNTGSVEAAMAVIREKLPKDYIFQYHNLKSNLDRIFTPPMEEYISPFSSSSFDQVPEELDEWAAHNVVNAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLQGPLYSGSNQSTAQGSEETQQEEESRS

NCBI Accession YP_007419084.1
Location 2179-2436
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCACTGCATCTCCATGTGCTCATCCAATTCAAAGGTAAAGCCCAGTTCCGTAATCCCAGACATTTCGACATCACACACCCTAATACCTCCACCCAATACCACCCAAACTTCCAGGGAGCTAAGTCCAGCTCGGACGTCAAGTCCTACATCAAAAAGGACGGTGATTACATCAACTGGGGTAGTTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAGGCCCTAA
Protein Sequence MGHCISMCSSNSKVKPSSVIPDISTSHTLIPPPNTTQTSRELSPARTSSPTSKRTVITSTGVVFRSMEDLHEEVNRQLMMLLQRP

References More References in PubMed

1

First Report of Tomato Yellow Leaf Curl Virus Infecting Pepper and Tomato in Oklahoma.

Paslay C, et al.  Plant Dis. 2022 Aug 12. doi: 10.1094/PDIS-04-22-0927-PDN. Online ahead of print.

PMID: 35961018
2

The threat of seed-transmissible pepper yellow leaf curl Indonesia virus in chili pepper.

Fadhila C, et al.  Microb Pathog. 2020 Jun;143:104132. doi: 10.1016/j.micpath.2020.104132. Epub 2020 Mar 10.

PMID: 32169496
3

Identification of the determinant of tomato yellow leaf curl Kanchanaburi virus infectivity in tomato.

An JW, et al.  Virus Res. 2021 Jan 2;291:198192. doi: 10.1016/j.virusres.2020.198192. Epub 2020 Oct 13.

PMID: 33058965
4

Pepper yellow leaf curl Aceh virus: a novel bipartite begomovirus isolated from chili pepper, tomato, and tobacco plants in Indonesia.

Kesumawati E, et al.  Arch Virol. 2019 Sep;164(9):2379-2383. doi: 10.1007/s00705-019-04316-8. Epub 2019 Jun 15.

PMID: 31203434
5

Genotyping-by-sequencing-based QTL mapping reveals novel loci for Pepper yellow leaf curl virus (PepYLCV) resistance in Capsicum annuum.

Siddique MI, et al.  PLoS One. 2022 Feb 17;17(2):e0264026. doi: 10.1371/journal.pone.0264026. eCollection 2022.

PMID: 35176091
6

First Report of Tomato Leaf Curl Cebu Virus Associated with Stachytarpheta jamaicensis Golden Yellow Mosaic Disease in Taiwan.

Tseng YW, et al.  Plant Dis. 2023 Feb 1. doi: 10.1094/PDIS-10-22-2304-PDN. Online ahead of print.

PMID: 36723960
7

Ty-2 and Ty-3a Conferred Resistance are Insufficient Against Tomato Yellow Leaf Curl Kanchanaburi Virus from Southeast Asia in Single or Mixed Infections of Tomato.

Koeda S, et al.  Plant Dis. 2020 Dec;104(12):3221-3229. doi: 10.1094/PDIS-03-20-0613-RE. Epub 2020 Oct 12.

PMID: 33044916
8

Tomato yellow leaf curl viruses: ménage à trois between the virus complex, the plant and the whitefly vector.

Díaz-Pendón JA, et al.  Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x.

PMID: 20618703
9

Characterization and distribution of tomato yellow margin leaf curl virus, a begomovirus from Venezuela.

Nava A, et al.  Arch Virol. 2013 Feb;158(2):399-406. doi: 10.1007/s00705-012-1501-x. Epub 2012 Oct 14.

PMID: 23064695
10

Virus Accumulation and Whitefly Performance Modulate the Role of Alternate Host Species as Inoculum Sources of Tomato Yellow Leaf Curl Virus.

Legarrea S, et al.  Plant Dis. 2020 Nov;104(11):2958-2966. doi: 10.1094/PDIS-09-19-1853-RE. Epub 2020 Sep 8.

PMID: 32897844