Pepper yellow leaf curl virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000905155.1
Isolate China
Release date 2015/2/22
Submitter Ruan,T., Qing,L.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_020236
ACCGGATGGCCGCGCAATTTTTTTAAAATGGACCCCGCATTTGCGTATGTCCACTCATGGCCGCTCCTCAAAGCTTATTTATTAAATGGTCCCCTATAAAACTTAGGCCCCAAGTATTTACGTTAAACATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTGCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGACCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTCTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAATTTTATTTCTGAATCCATGTCTACATACATAGTTTGTTCTATTTTTTTCCATAATACATGATTTACAGCTCTAATAATTGAGTTAATTGAAATTACACCTAGATTGTTTAGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCTGAGGGTGTAAGGTCGTCCAGATTCGGTATGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGACGTGGTTGAGGATCTTGAAATAAAGGGGATTTTTGACCGTCCAAATATAAACGCCATTCTCTGCTTGAGCTGCAGTGAGTAGTTCCCCTGTGCGCGAATCCATGGTTGAAGCAGTTTAATGATAGAAAATAAGAACACCCGCATTCAAGATCGACTCTCCTCCTCCTGTTGCGTTTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCTTGGAGGGTGACGAAGATCGCATTCTTTAGAGCCCAATTCTTTAGTGCGGTGTTCTTTTCCTCGTCGAGGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTATTTAGTGTTTGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGCTTGAGGAAGTGCGGGTCGACGTCATCAATGACGTTGAACCAAGCATCATTACTGTATACCTTTGGACTCAGATCTAAATGACCACACAGATAGTTGTGTGGGCCTAGTGACCTAGCCCACATCGTCTTCCCGGTTCTACTATCTCCCTCAATGACTATACTTTGAGGTCTTAAAGGCCGCGCAGCGGCATTGACGACGTTATGGGCCGCCCATTCATCAAGTTCTTCTGGAACTTGGTCAAAAGAAGAAGAAGAAAAAGGAGAAATATATTCCTCCATTGGAGGAGTAAAAATCCTATCTAAATTAGATTTTAAATTATGATACTGAAAAATATAATCTTTCGGGAGTTTCTCCCGAATGACAGCCATAGCGGCTTCAACGGAGCCTGTGTTTAGGGCCTCTGCAGCAGCATCATTAGCTGTCTGTTGACCTCCTCGTGCAGATCTTCCATCGATCTGAAAACTACCCCAGTTGATGTAATCACCGTCCTTTTTGATGTAGGACTTGACGTCCGAGCTGGACTTAGCTCCCTGGAAGTTTGGGTGGTATTGGGTGGAGGTATTAGGGTGTGTGATGTCGAAATGTCTGGGATTACGGAACTGGGCTTTACCTTTGAATTGGATGAGCACATGGAGATGCAGTGACCCATTCTTATGTTTTTCTTGTGCTACTCGTATGAATAATTTATCGGATGGGCATGCTATTTGTTGGATAAGTTCTAGGGCTTGCTCTTTCGGAATGGGACATTTGGGATAAGTGAGAAAGATATTTTTTGCTTTCACTTGGAATGAATTAAGACGAGGCATTTTGACCGAGTGAATTGGGTGCTCTCCAAAGTTCTATAGAATGGGGGGCTTTGGGTGCCTATTTATACCGAGCACCCAAATGGCAATATTGTAATTCCCAAACGAAATTCAAAATTCAAAATTCTAAATCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_007419079.1
Location 129-467
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTGCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAG
Protein Sequence MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIRELISILRARNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHESQAQNVQDV

NCBI Accession YP_007419080.1
Location 289-1059
Gene Name AV1
Protein Name AV1 protein
Coding Region ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGACCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTCTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAA
Protein Sequence MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWANRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_007419081.1
Location 1056-1460
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCGCGCACAGGGGAACTACTCACTGCAGCTCAAGCAGAGAATGGCGTTTATATTTGGACGGTCAAAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATCTAGGTGTAATTTCAATTAACTCAATTATTAGAGCTGTAAATCATGTATTATGGAAAAAAATAGAACAAACTATGTATGTAGACATGGATTCAGAAATAAAATTTAATATTTATTAA
Protein Sequence MDSRTGELLTAAQAENGVYIWTVKNPLYFKILNHVNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNLGVISINSIIRAVNHVLWKKIEQTMYVDMDSEIKFNIY

NCBI Accession YP_007419082.1
Location 1153-1605
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGAATGCGGGTGTTCTTATTTTCTATCATTAAACTGCTTCAACCATGGATTCGCGCACAGGGGAACTACTCACTGCAGCTCAAGCAGAGAATGGCGTTTATATTTGGACGGTCAAAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATCTAGGTGTAATTTCAATTAA
Protein Sequence MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYFLSLNCFNHGFAHRGTTHCSSSREWRLYLDGQKSPLFQDPQPRQPSIHDEHGHHNNKDPIQLQPSESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQSRCNFN

NCBI Accession YP_007419083.1
Location 1502-2593
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGCCTCGTCTTAATTCATTCCAAGTGAAAGCAAAAAATATCTTTCTCACTTATCCCAAATGTCCCATTCCGAAAGAGCAAGCCCTAGAACTTATCCAACAAATAGCATGCCCATCCGATAAATTATTCATACGAGTAGCACAAGAAAAACATAAGAATGGGTCACTGCATCTCCATGTGCTCATCCAATTCAAAGGTAAAGCCCAGTTCCGTAATCCCAGACATTTCGACATCACACACCCTAATACCTCCACCCAATACCACCCAAACTTCCAGGGAGCTAAGTCCAGCTCGGACGTCAAGTCCTACATCAAAAAGGACGGTGATTACATCAACTGGGGTAGTTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAGGCCCTAAACACAGGCTCCGTTGAAGCCGCTATGGCTGTCATTCGGGAGAAACTCCCGAAAGATTATATTTTTCAGTATCATAATTTAAAATCTAATTTAGATAGGATTTTTACTCCTCCAATGGAGGAATATATTTCTCCTTTTTCTTCTTCTTCTTTTGACCAAGTTCCAGAAGAACTTGATGAATGGGCGGCCCATAACGTCGTCAATGCCGCTGCGCGGCCTTTAAGACCTCAAAGTATAGTCATTGAGGGAGATAGTAGAACCGGGAAGACGATGTGGGCTAGGTCACTAGGCCCACACAACTATCTGTGTGGTCATTTAGATCTGAGTCCAAAGGTATACAGTAATGATGCTTGGTTCAACGTCATTGATGACGTCGACCCGCACTTCCTCAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCAAACACTAAATACGGGAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTCTGCAATCCTGGTCCCAACAGCAGTTATAAAGAATTCCTCGACGAGGAAAAGAACACCGCACTAAAGAATTGGGCTCTAAAGAATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGA
Protein Sequence MPRLNSFQVKAKNIFLTYPKCPIPKEQALELIQQIACPSDKLFIRVAQEKHKNGSLHLHVLIQFKGKAQFRNPRHFDITHPNTSTQYHPNFQGAKSSSDVKSYIKKDGDYINWGSFQIDGRSARGGQQTANDAAAEALNTGSVEAAMAVIREKLPKDYIFQYHNLKSNLDRIFTPPMEEYISPFSSSSFDQVPEELDEWAAHNVVNAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLQGPLYSGSNQSTAQGSEETQQEEESRS

NCBI Accession YP_007419084.1
Location 2179-2436
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCACTGCATCTCCATGTGCTCATCCAATTCAAAGGTAAAGCCCAGTTCCGTAATCCCAGACATTTCGACATCACACACCCTAATACCTCCACCCAATACCACCCAAACTTCCAGGGAGCTAAGTCCAGCTCGGACGTCAAGTCCTACATCAAAAAGGACGGTGATTACATCAACTGGGGTAGTTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAGGCCCTAA
Protein Sequence MGHCISMCSSNSKVKPSSVIPDISTSHTLIPPPNTTQTSRELSPARTSSPTSKRTVITSTGVVFRSMEDLHEEVNRQLMMLLQRP

References More References in PubMed

1

Tomato yellow leaf curl virus: Characteristics, influence, and regulation mechanism.

Cao X, et al.  Plant Physiol Biochem. 2024 Aug;213:108812. doi: 10.1016/j.plaphy.2024.108812. Epub 2024 Jun 8.

PMID: 38875781
2

Pepper yellow leaf curl Aceh virus: a novel bipartite begomovirus isolated from chili pepper, tomato, and tobacco plants in Indonesia.

Kesumawati E, et al.  Arch Virol. 2019 Sep;164(9):2379-2383. doi: 10.1007/s00705-019-04316-8. Epub 2019 Jun 15.

PMID: 31203434
3

The threat of seed-transmissible pepper yellow leaf curl Indonesia virus in chili pepper.

Fadhila C, et al.  Microb Pathog. 2020 Jun;143:104132. doi: 10.1016/j.micpath.2020.104132. Epub 2020 Mar 10.

PMID: 32169496
4

Identification of the determinant of tomato yellow leaf curl Kanchanaburi virus infectivity in tomato.

An JW, et al.  Virus Res. 2021 Jan 2;291:198192. doi: 10.1016/j.virusres.2020.198192. Epub 2020 Oct 13.

PMID: 33058965
5

Genotyping-by-sequencing-based QTL mapping reveals novel loci for Pepper yellow leaf curl virus (PepYLCV) resistance in Capsicum annuum.

Siddique MI, et al.  PLoS One. 2022 Feb 17;17(2):e0264026. doi: 10.1371/journal.pone.0264026. eCollection 2022.

PMID: 35176091
6

Tomato yellow leaf curl viruses: menage a trois between the virus complex, the plant and the whitefly vector.

Díaz-Pendón JA, et al.  Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x.

PMID: 20618703
7

Ty-2 and Ty-3a Conferred Resistance are Insufficient Against Tomato Yellow Leaf Curl Kanchanaburi Virus from Southeast Asia in Single or Mixed Infections of Tomato.

Koeda S, et al.  Plant Dis. 2020 Dec;104(12):3221-3229. doi: 10.1094/PDIS-03-20-0613-RE. Epub 2020 Oct 12.

PMID: 33044916
8

First Report of Tomato yellow leaf curl virus in Louisiana.

Valverde RA, et al.  Plant Dis. 2001 Feb;85(2):230. doi: 10.1094/PDIS.2001.85.2.230D.

PMID: 30831958
9

First record of tomato yellow leaf curl Sardinia virus (TYLCSV) on pepper in Italy.

Fanigliulo A, et al.  Commun Agric Appl Biol Sci. 2008;73(2):297-302.

PMID: 19226766
10

Molecular Characterization of Pepper yellow leaf curl Indonesia virus in Leaf Curl and Yellowing Diseased Tomato and Pepper in Indonesia.

Tsai WS, et al.  Plant Dis. 2006 Feb;90(2):247. doi: 10.1094/PD-90-0247B.

PMID: 30786428