Pepper yellow leaf curl virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000905155.1 |
| Isolate | China |
| Release date | 2015/2/22 |
| Submitter | Ruan,T., Qing,L. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_020236
ACCGGATGGCCGCGCAATTTTTTTAAAATGGACCCCGCATTTGCGTATGTCCACTCATGGCCGCTCCTCAAAGCTTATTTATTAAATGGTCCCCTATAAAACTTAGGCCCCAAGTATTTACGTTAAACATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTGCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGACCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTCTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAATTTTATTTCTGAATCCATGTCTACATACATAGTTTGTTCTATTTTTTTCCATAATACATGATTTACAGCTCTAATAATTGAGTTAATTGAAATTACACCTAGATTGTTTAGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCTGAGGGTGTAAGGTCGTCCAGATTCGGTATGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGACGTGGTTGAGGATCTTGAAATAAAGGGGATTTTTGACCGTCCAAATATAAACGCCATTCTCTGCTTGAGCTGCAGTGAGTAGTTCCCCTGTGCGCGAATCCATGGTTGAAGCAGTTTAATGATAGAAAATAAGAACACCCGCATTCAAGATCGACTCTCCTCCTCCTGTTGCGTTTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCTTGGAGGGTGACGAAGATCGCATTCTTTAGAGCCCAATTCTTTAGTGCGGTGTTCTTTTCCTCGTCGAGGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTATTTAGTGTTTGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGCTTGAGGAAGTGCGGGTCGACGTCATCAATGACGTTGAACCAAGCATCATTACTGTATACCTTTGGACTCAGATCTAAATGACCACACAGATAGTTGTGTGGGCCTAGTGACCTAGCCCACATCGTCTTCCCGGTTCTACTATCTCCCTCAATGACTATACTTTGAGGTCTTAAAGGCCGCGCAGCGGCATTGACGACGTTATGGGCCGCCCATTCATCAAGTTCTTCTGGAACTTGGTCAAAAGAAGAAGAAGAAAAAGGAGAAATATATTCCTCCATTGGAGGAGTAAAAATCCTATCTAAATTAGATTTTAAATTATGATACTGAAAAATATAATCTTTCGGGAGTTTCTCCCGAATGACAGCCATAGCGGCTTCAACGGAGCCTGTGTTTAGGGCCTCTGCAGCAGCATCATTAGCTGTCTGTTGACCTCCTCGTGCAGATCTTCCATCGATCTGAAAACTACCCCAGTTGATGTAATCACCGTCCTTTTTGATGTAGGACTTGACGTCCGAGCTGGACTTAGCTCCCTGGAAGTTTGGGTGGTATTGGGTGGAGGTATTAGGGTGTGTGATGTCGAAATGTCTGGGATTACGGAACTGGGCTTTACCTTTGAATTGGATGAGCACATGGAGATGCAGTGACCCATTCTTATGTTTTTCTTGTGCTACTCGTATGAATAATTTATCGGATGGGCATGCTATTTGTTGGATAAGTTCTAGGGCTTGCTCTTTCGGAATGGGACATTTGGGATAAGTGAGAAAGATATTTTTTGCTTTCACTTGGAATGAATTAAGACGAGGCATTTTGACCGAGTGAATTGGGTGCTCTCCAAAGTTCTATAGAATGGGGGGCTTTGGGTGCCTATTTATACCGAGCACCCAAATGGCAATATTGTAATTCCCAAACGAAATTCAAAATTCAAAATTCTAAATCCAAAAGCGGCCATCCGTATAATATT
Gene Information
| NCBI Accession | YP_007419079.1 |
|---|---|
| Location | 129-467 |
| Gene Name | AV2 |
| Protein Name | AV2 protein |
| Coding Region | ATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTGCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAG |
| Protein Sequence | MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIRELISILRARNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHESQAQNVQDV |
| NCBI Accession | YP_007419080.1 |
|---|---|
| Location | 289-1059 |
| Gene Name | AV1 |
| Protein Name | AV1 protein |
| Coding Region | ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGACCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTCTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAA |
| Protein Sequence | MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWANRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
| NCBI Accession | YP_007419081.1 |
|---|---|
| Location | 1056-1460 |
| Gene Name | AC3 |
| Protein Name | AC3 protein |
| Coding Region | ATGGATTCGCGCACAGGGGAACTACTCACTGCAGCTCAAGCAGAGAATGGCGTTTATATTTGGACGGTCAAAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATCTAGGTGTAATTTCAATTAACTCAATTATTAGAGCTGTAAATCATGTATTATGGAAAAAAATAGAACAAACTATGTATGTAGACATGGATTCAGAAATAAAATTTAATATTTATTAA |
| Protein Sequence | MDSRTGELLTAAQAENGVYIWTVKNPLYFKILNHVNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNLGVISINSIIRAVNHVLWKKIEQTMYVDMDSEIKFNIY |
| NCBI Accession | YP_007419082.1 |
|---|---|
| Location | 1153-1605 |
| Gene Name | AC2 |
| Protein Name | AC2 protein |
| Coding Region | ATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGAATGCGGGTGTTCTTATTTTCTATCATTAAACTGCTTCAACCATGGATTCGCGCACAGGGGAACTACTCACTGCAGCTCAAGCAGAGAATGGCGTTTATATTTGGACGGTCAAAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATCTAGGTGTAATTTCAATTAA |
| Protein Sequence | MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYFLSLNCFNHGFAHRGTTHCSSSREWRLYLDGQKSPLFQDPQPRQPSIHDEHGHHNNKDPIQLQPSESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQSRCNFN |
| NCBI Accession | YP_007419083.1 |
|---|---|
| Location | 1502-2593 |
| Gene Name | AC1 |
| Protein Name | AC1 protein |
| Coding Region | ATGCCTCGTCTTAATTCATTCCAAGTGAAAGCAAAAAATATCTTTCTCACTTATCCCAAATGTCCCATTCCGAAAGAGCAAGCCCTAGAACTTATCCAACAAATAGCATGCCCATCCGATAAATTATTCATACGAGTAGCACAAGAAAAACATAAGAATGGGTCACTGCATCTCCATGTGCTCATCCAATTCAAAGGTAAAGCCCAGTTCCGTAATCCCAGACATTTCGACATCACACACCCTAATACCTCCACCCAATACCACCCAAACTTCCAGGGAGCTAAGTCCAGCTCGGACGTCAAGTCCTACATCAAAAAGGACGGTGATTACATCAACTGGGGTAGTTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAGGCCCTAAACACAGGCTCCGTTGAAGCCGCTATGGCTGTCATTCGGGAGAAACTCCCGAAAGATTATATTTTTCAGTATCATAATTTAAAATCTAATTTAGATAGGATTTTTACTCCTCCAATGGAGGAATATATTTCTCCTTTTTCTTCTTCTTCTTTTGACCAAGTTCCAGAAGAACTTGATGAATGGGCGGCCCATAACGTCGTCAATGCCGCTGCGCGGCCTTTAAGACCTCAAAGTATAGTCATTGAGGGAGATAGTAGAACCGGGAAGACGATGTGGGCTAGGTCACTAGGCCCACACAACTATCTGTGTGGTCATTTAGATCTGAGTCCAAAGGTATACAGTAATGATGCTTGGTTCAACGTCATTGATGACGTCGACCCGCACTTCCTCAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCAAACACTAAATACGGGAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTCTGCAATCCTGGTCCCAACAGCAGTTATAAAGAATTCCTCGACGAGGAAAAGAACACCGCACTAAAGAATTGGGCTCTAAAGAATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGA |
| Protein Sequence | MPRLNSFQVKAKNIFLTYPKCPIPKEQALELIQQIACPSDKLFIRVAQEKHKNGSLHLHVLIQFKGKAQFRNPRHFDITHPNTSTQYHPNFQGAKSSSDVKSYIKKDGDYINWGSFQIDGRSARGGQQTANDAAAEALNTGSVEAAMAVIREKLPKDYIFQYHNLKSNLDRIFTPPMEEYISPFSSSSFDQVPEELDEWAAHNVVNAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLQGPLYSGSNQSTAQGSEETQQEEESRS |
| NCBI Accession | YP_007419084.1 |
|---|---|
| Location | 2179-2436 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGTCACTGCATCTCCATGTGCTCATCCAATTCAAAGGTAAAGCCCAGTTCCGTAATCCCAGACATTTCGACATCACACACCCTAATACCTCCACCCAATACCACCCAAACTTCCAGGGAGCTAAGTCCAGCTCGGACGTCAAGTCCTACATCAAAAAGGACGGTGATTACATCAACTGGGGTAGTTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAGGCCCTAA |
| Protein Sequence | MGHCISMCSSNSKVKPSSVIPDISTSHTLIPPPNTTQTSRELSPARTSSPTSKRTVITSTGVVFRSMEDLHEEVNRQLMMLLQRP |
References More References in PubMed
| 1 |
Kesumawati E, et al. Arch Virol. 2019 Sep;164(9):2379-2383. doi: 10.1007/s00705-019-04316-8. Epub 2019 Jun 15. PMID: 31203434 |
|---|---|
| 2 |
The threat of seed-transmissible pepper yellow leaf curl Indonesia virus in chili pepper. Fadhila C, et al. Microb Pathog. 2020 Jun;143:104132. doi: 10.1016/j.micpath.2020.104132. Epub 2020 Mar 10. PMID: 32169496 |
| 3 |
Tomato yellow leaf curl virus: Characteristics, influence, and regulation mechanism. Cao X, et al. Plant Physiol Biochem. 2024 Aug;213:108812. doi: 10.1016/j.plaphy.2024.108812. Epub 2024 Jun 8. PMID: 38875781 |
| 4 |
Siddique MI, et al. PLoS One. 2022 Feb 17;17(2):e0264026. doi: 10.1371/journal.pone.0264026. eCollection 2022. PMID: 35176091 |
| 5 |
An JW, et al. Virus Res. 2021 Jan 2;291:198192. doi: 10.1016/j.virusres.2020.198192. Epub 2020 Oct 13. PMID: 33058965 |
| 6 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
| 7 |
Sakata JJ, et al. Arch Virol. 2008;153(12):2307-13. doi: 10.1007/s00705-008-0254-z. Epub 2008 Nov 18. PMID: 19015934 |
| 8 |
First record of tomato yellow leaf curl Sardinia virus (TYLCSV) on pepper in Italy. Fanigliulo A, et al. Commun Agric Appl Biol Sci. 2008;73(2):297-302. PMID: 19226766 |
| 9 |
Pepper (Capsicum annuum) Is a Dead-End Host for Tomato yellow leaf curl virus. Morilla G, et al. Phytopathology. 2005 Sep;95(9):1089-97. doi: 10.1094/PHYTO-95-1089. PMID: 18943307 |
| 10 |
Nava A, et al. Arch Virol. 2013 Feb;158(2):399-406. doi: 10.1007/s00705-012-1501-x. Epub 2012 Oct 14. PMID: 23064695 |