Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000867505.1 |
Isolate | Indonesia |
Release date | 2015/2/13 |
Submitter | Sakata,J.J., Shibuya,Y., Sharma,P., Ikegami,M., Sakata,J. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_717090.1 |
---|---|
Location | 135-488 |
Gene Name | AV2 |
Protein Name | moving protein |
Coding Region | ATGTGGGATCCGCTCGTTCATCCTTTTCCAGAAACCCTACACGGGTTTCGATGCATGTTGGCAATCAAATATCTGCAAAGCTTAGAGGCTACGTATTCTCCTGATACGGTCGGAGGTGAATTTGTGAAGGATTTAATCTGCCTGTTGCGTTGTAAAAACTATGCCGAAGCGTTCCATCGATACAGTGTCGTCGTTGCCAATGTCTATAACACGCCGGAGACTAAACTACGCGAGTCAGTACAGTCTCCCTGCTGCTGCCCCCACTGCCCCAGGCATGTCTTACAAACGAAGAGCATGGGTAAATCGGCCTATGAATCGGAAACCCAGATTCTACAGGGGTCGAAGGACCAGTGA |
Protein Sequence | MWDPLVHPFPETLHGFRCMLAIKYLQSLEATYSPDTVGGEFVKDLICLLRCKNYAEAFHRYSVVVANVYNTPETKLRESVQSPCCCPHCPRHVLQTKSMGKSAYESETQILQGSKDQ |
NCBI Accession | YP_717091.1 |
---|---|
Location | 295-1071 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCGAAGCGTTCCATCGATACAGTGTCGTCGTTGCCAATGTCTATAACACGCCGGAGACTAAACTACGCGAGTCAGTACAGTCTCCCTGCTGCTGCCCCCACTGCCCCAGGCATGTCTTACAAACGAAGAGCATGGGTAAATCGGCCTATGAATCGGAAACCCAGATTCTACAGGGGTCGAAGGACCAGTGATGTTCCACGGGGTTGTGAAGGACCTTGTAAGGTCCAATCCTTTGAACAGAGACATGACGTAACACATACTGGGAAGGTCCTTTGCGTTTCCGATGTCACTAGAGGTAATGGTATTACGCATAGAGTAGGGAAAAGATTCTGTGTGAAATCTGTATATATTATTGGCAAAGTATGGATGGACGAGAACATCAAGTCGAAGAACCACACTAATAACGTCATGTTTTGGCTTGTTCGTGACCGGCGACCAGTTACAACTCCTTATGGCTTCGGCGAGTTGTTCAACATGTATGATAATGAACCCAGCACAGCAACTATCAAGAACGATCTTCGTGATCGTGTTCAGGTGTTACATCGTTTCTCAGCCACGGTGACAGGTGGTCAGTATGCAAGCAAAGAACAAGCAATCGTGAAGAGATTTTTTAGAGTTAACAATTATGTTGTTTACAATCATCAAGAAGCAGCAAAATATGAAAATCACACTGAAAATGCATTGTTGTTGTATATGGCATGTACTCATGCATCTAATCCTGTGTACGCTACATTGAAAATTCGTATATACTTCTACGACAATGTAACAAATTAA |
Protein Sequence | MPKRSIDTVSSLPMSITRRRLNYASQYSLPAAAPTAPGMSYKRRAWVNRPMNRKPRFYRGRRTSDVPRGCEGPCKVQSFEQRHDVTHTGKVLCVSDVTRGNGITHRVGKRFCVKSVYIIGKVWMDENIKSKNHTNNVMFWLVRDRRPVTTPYGFGELFNMYDNEPSTATIKNDLRDRVQVLHRFSATVTGGQYASKEQAIVKRFFRVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDNVTN |
NCBI Accession | YP_717092.1 |
---|---|
Location | 1068-1472 |
Gene Name | AC3 |
Protein Name | replication enhancer |
Coding Region | ATGGATTTTCGCACAGGGGAGTACATCACTGCAGCTCAGGCGCAGAATGGCGTCTATATTTGGAAGGTTCCAAATCCCCTCTATTTCAAGGTGCTGAGGCACAGCACCAGACCGTTCAACACCGACATGGACTACATGGAAGTGCAAATCCAATTCAACCACAACTTGAGGAAAGCGCTGGGGATTCACAAGTGTTTTTTAATCTTCCACATTTGGACTCGTTTACGTCCTCAGACTTGGCATTTCTTAAGAGTATTTAAGAACAATGTAATTAGCTATTTATCCAATTTAGGAATTGTGTCGATAAACAATGTAATTAGAGCTGTGAATTATGTTTTGTGGGATGTACTTGAACATACAGTGTACGCAAAGCAGTTGCATATAATAAAATTTAACCTTTATTAA |
Protein Sequence | MDFRTGEYITAAQAQNGVYIWKVPNPLYFKVLRHSTRPFNTDMDYMEVQIQFNHNLRKALGIHKCFLIFHIWTRLRPQTWHFLRVFKNNVISYLSNLGIVSINNVIRAVNYVLWDVLEHTVYAKQLHIIKFNLY |
NCBI Accession | YP_717093.1 |
---|---|
Location | 1213-1620 |
Gene Name | AC2 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCGACCTTCGTCACCATCAACGGGCCACTCTACTCAAGTTCCACAGAAGATACTGCACCAAATTGCGAAGAAGAAAATAATCCGCAGGAGACGTATTGACTTAGACTGCGGCTGCTCATATTATCTCAGTATCAACTGTCATGGGTATGGATTTTCGCACAGGGGAGTACATCACTGCAGCTCAGGCGCAGAATGGCGTCTATATTTGGAAGGTTCCAAATCCCCTCTATTTCAAGGTGCTGAGGCACAGCACCAGACCGTTCAACACCGACATGGACTACATGGAAGTGCAAATCCAATTCAACCACAACTTGAGGAAAGCGCTGGGGATTCACAAGTGTTTTTTAATCTTCCACATTTGGACTCGTTTACGTCCTCAGACTTGGCATTTCTTAAGAGTATTTAA |
Protein Sequence | MRPSSPSTGHSTQVPQKILHQIAKKKIIRRRRIDLDCGCSYYLSINCHGYGFSHRGVHHCSSGAEWRLYLEGSKSPLFQGAEAQHQTVQHRHGLHGSANPIQPQLEESAGDSQVFFNLPHLDSFTSSDLAFLKSI |
NCBI Accession | YP_717094.1 |
---|---|
Location | 1520-2608 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGCCTCCACCACGTCGTTTTAAGTTGCAGAGCAAAAACTATTTCTTAACATATCCACACTGTTCTCTAACAAAAGAAGAAGCACTGGAACAATTAAAATCTTTTAACACTCCTGTCAACAAGCTGTTTGTCAAGATCTGTAGAGAACTTCACGAAGATGGGAGCCCTCATCTCCATGTGCTCATACAATTCGAAGGAAAATACGTCTGCACCAACAACAGATTCTTCGACCTGCTATCCTCAACCAGGGCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCAAGTTCCGATGTCAAGGCGTACATGGACAAAGACGGTGATTCAATCGAATGGGGAGAATTTCAGATAGATGGCAGATCTGCACGAGGTGGTCAACACACCGTCAACGATGTTTATGCGCAGGCCCTAAATTGTGGAAGTAAGTCCGATGCTCTTCAATTGATTAAAGAGCTTGCTCCAAAAGACTACGTTCTACAGTACCACAATTTAAATGTTAATTTCGATAAAATATTTGCTAAACCTGTAGATGCATTTGTTTCACCATATCCGTCGTCGTCGTTTGACCAAGTTCCAGAGGAACTACGAGAATGGGCTAGTGAAAATGTGAAGGATGCCGCTGCGCGGCCATGGAGGCCCATTAGTATTGTGTTAGAAGGTGAGAGTCGTACAGGCAAAACAATGTGGGCTAGATCATTGGGCCTCCATAATTATCTCTGTGGACATCTAGACTTGAGCCCCAAGGTATACAACAATGACGCCTGGTACAACGTCATTGATGACGTCGACCCCCACTATCTAAAGCACTTTAAAGAGTTTATGGGGGCCCAGAGGAACTGGCAAAGCAACACAAAATACGGCAAGCCAATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCTGGTCCTACCTCGTCATATAAAGAATACCTTGACGAGGACAAAAATAATGCATTGAAATCTTGGGCACTAAAAAATGCGACCTTCGTCACCATCAACGGGCCACTCTACTCAAGTTCCACAGAAGATACTGCACCAAATTGCGAAGAAGAAAATAATCCGCAGGAGACGTATTGA |
Protein Sequence | MPPPRRFKLQSKNYFLTYPHCSLTKEEALEQLKSFNTPVNKLFVKICRELHEDGSPHLHVLIQFEGKYVCTNNRFFDLLSSTRAAHFHPNIQGAKSSSDVKAYMDKDGDSIEWGEFQIDGRSARGGQHTVNDVYAQALNCGSKSDALQLIKELAPKDYVLQYHNLNVNFDKIFAKPVDAFVSPYPSSSFDQVPEELREWASENVKDAAARPWRPISIVLEGESRTGKTMWARSLGLHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRNWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNNALKSWALKNATFVTINGPLYSSSTEDTAPNCEEENNPQETY |
NCBI Accession | YP_717095.1 |
---|---|
Location | 166-999 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGAGAATTCCCATTAGAACTCCCATGGGTTCAAACAGAGACCGGAGAGGGGGTTCTGGTTCCATATTCCGGTGGAACAACCCATATTCACGGTATTTTGGTCGTAGAGTTGGCACCCGTGTATACGGTATGCCTTTTGGTGGGTCGTCTGTACCTCGTAGACATGTCAGCAATTCTGTTCGTCGGAACTTGTTTTCCGACCACCAAGACAAAGGGCGTAAAAGAAGAAATTCTATAGAGGAGGTACATGACGGTACAGACTATCTTCTTTGTAACAACACTTCTAAGGTGTCTTATATTAGCTATCCTGCCATGTGCCGTTCTGATTTTAGTAGCAGGATAGATTCATTTGTTCGAGTGTTAGGGTTCAATGTCTCTGGGTCAGTAGTTGCCCGTCAGCAGGAGCGGGTTGACGGTTCGAAGACAAGCGGTATCCACGGCATATTCAGTACGGTGGTTGTCCGAGACAAGAAGCCTTGCGAGTTCTCCTCTGTGGATCCCCTCATTCCATTTGCGGAGATATTCGGACATGAGAAGGGAGCATGTTCTACTCTAAGAGTTAGAGATGCACATAGGAATAGGTTTGTGTTAGTCCAGCAGAAGAAGTGCGTTGTAAATACCGCTTTGCCGGTTCATGTATTTAGGTTTGTTTATTCTGTTAGGTTCAATAGATACCCTCTCTGGGTATCATTCAAGGACACAACTGATGTAGAACCTAGTGGTCTCTACAGCAACGTGTCAAAGAACGCACTTCTTGTTTATTATGTCTGGTTGTGTGATTCCAATGTAACTTCCGACATTCATGTAAAGTACGACCTTGACTATATTGGATAA |
Protein Sequence | MRIPIRTPMGSNRDRRGGSGSIFRWNNPYSRYFGRRVGTRVYGMPFGGSSVPRRHVSNSVRRNLFSDHQDKGRKRRNSIEEVHDGTDYLLCNNTSKVSYISYPAMCRSDFSSRIDSFVRVLGFNVSGSVVARQQERVDGSKTSGIHGIFSTVVVRDKKPCEFSSVDPLIPFAEIFGHEKGACSTLRVRDAHRNRFVLVQQKKCVVNTALPVHVFRFVYSVRFNRYPLWVSFKDTTDVEPSGLYSNVSKNALLVYYVWLCDSNVTSDIHVKYDLDYIG |
NCBI Accession | YP_717096.1 |
---|---|
Location | 1013-1849 |
Gene Name | BC1 |
Protein Name | movement protein in DNA-B |
Coding Region | ATGGAAACTAACCACAACACTCTTGCATATTCCACGTCGGACAGGACAGAGTTTCAACTGTCCAATGAAAAAACAGAGGTGACATTGTTGTTCCCTTCCACTCTTGATCAAAAATTGTCCAAACTCATGGGCAAATGTTTGAGAATTGACCATGTCATTCTTGAATACAGGAATCAGGTTCCTGTAAATGCAACTGGACACGTCATAATAGAGATGCACGACACAAGACTGCACGAAGGAGACTCGAAACAGGCGGAGTTCACAATTCCAATTGGGTGCAACTGCAATATACACTACTACTCCTCTTCGTATTTTTCCCCGAAAGACCCTAATCCTTGGAAGGTTCTATACAGGGTTGACGACACGAATGTCGTCAACGGGGTACATTTCTGTAGGATGCAAGGCAAGCTGAAGATGTCTTCAGCTAAACAGTCCACAGAAATCCAGTTCAAATCCCCCAAGATTGAAATATTGTCCAAGGCGTTTAACATGACCAACATTGATTTCTGGACGGTGCCCCATTCTCAGGTTTCCAGGAAACCTGTCCAAGGACTGACCAACATGAGGTCGCAGTCATGTCGATACACAACTCCTGCAATTCTTCCTGGGCAGACATGGGCTTCTGCAAGTGCAATTGGGAATGAAGATCAAGACGATCTTCCATACAGAGGACTGCACCGGCTGCAAGACCAGACACTAGACCCGGGACCATCTGCCTCAGACGTTGTTGTGAATAACAACAAGATTAACGACGATGTAATTAACATTATCAAAAAAACTGTAGAGTTGTGTATGGAAGGCAGTAATGTAACTTCGAATGCAAAACCGATCAAATAA |
Protein Sequence | METNHNTLAYSTSDRTEFQLSNEKTEVTLLFPSTLDQKLSKLMGKCLRIDHVILEYRNQVPVNATGHVIIEMHDTRLHEGDSKQAEFTIPIGCNCNIHYYSSSYFSPKDPNPWKVLYRVDDTNVVNGVHFCRMQGKLKMSSAKQSTEIQFKSPKIEILSKAFNMTNIDFWTVPHSQVSRKPVQGLTNMRSQSCRYTTPAILPGQTWASASAIGNEDQDDLPYRGLHRLQDQTLDPGPSASDVVVNNNKINDDVINIIKKTVELCMEGSNVTSNAKPIK |
1 |
The threat of seed-transmissible pepper yellow leaf curl Indonesia virus in chili pepper. Fadhila C, et al. Microb Pathog. 2020 Jun;143:104132. doi: 10.1016/j.micpath.2020.104132. Epub 2020 Mar 10. PMID: 32169496 |
---|---|
2 |
Kesumawati E, et al. Arch Virol. 2019 Sep;164(9):2379-2383. doi: 10.1007/s00705-019-04316-8. Epub 2019 Jun 15. PMID: 31203434 |
3 |
Siddique MI, et al. PLoS One. 2022 Feb 17;17(2):e0264026. doi: 10.1371/journal.pone.0264026. eCollection 2022. PMID: 35176091 |
4 |
Neriya Y, et al. Microbiol Resour Announc. 2020 Jun 18;9(25):e00486-20. doi: 10.1128/MRA.00486-20. PMID: 32554790 |
5 |
First Report of Pepper yellow leaf curl Indonesia virus in Ageratum conyzoides in Indonesia. Shibuya Y, et al. Plant Dis. 2007 Sep;91(9):1198. doi: 10.1094/PDIS-91-9-1198B. PMID: 30780641 |
6 |
Tsai WS, et al. Plant Dis. 2009 Mar;93(3):321. doi: 10.1094/PDIS-93-3-0321C. PMID: 30764201 |
7 |
Tsai WS, et al. Plant Dis. 2006 Feb;90(2):247. doi: 10.1094/PD-90-0247B. PMID: 30786428 |
8 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
9 |
Sakata JJ, et al. Arch Virol. 2008;153(12):2307-13. doi: 10.1007/s00705-008-0254-z. Epub 2008 Nov 18. PMID: 19015934 |
10 |
Koeda S, et al. Plant Dis. 2020 Dec;104(12):3221-3229. doi: 10.1094/PDIS-03-20-0613-RE. Epub 2020 Oct 12. PMID: 33044916 |